Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 9.2e-136 486.9 243 100.0
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.6e-124 448.4 244 93.4
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.6e-124 448.4 244 93.4
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.9e-102 375.2 243 81.1
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 5.6e-101 371.3 257 76.3
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 3.3e-93 345.5 254 72.8
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.7e-81 306.6 248 65.7
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 6.4e-81 304.7 247 66.8
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.2e-79 300.4 249 65.1
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 3.5e-79 298.9 245 62.9
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 7.9e-79 297.7 247 64.0
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.9e-78 295.4 247 64.0
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 3.9e-78 295.4 247 64.0
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.1e-77 293.9 250 66.0
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 1.1e-77 293.9 251 63.7
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 1.1e-77 293.9 247 64.0
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 1.9e-77 293.1 249 64.3
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 3.3e-77 292.4 245 64.5
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 5.6e-77 291.6 246 63.4
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 7.4e-77 291.2 246 61.4
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 9.6e-77 290.8 249 65.1
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 1.6e-76 290.0 252 62.3
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 1.6e-76 290.0 246 64.6
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 2.1e-76 289.7 247 64.4
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 6.2e-76 288.1 231 66.2
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 8.2e-76 287.7 244 61.5
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 8.2e-76 287.7 197 74.1
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 1.4e-75 287.0 246 63.8
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 1.8e-75 286.6 252 62.7
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 1.8e-75 286.6 246 64.2
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 2.4e-75 286.2 248 61.7
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 5.3e-75 285.0 253 60.9
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 1.2e-74 283.9 247 61.9
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 1.5e-74 283.5 252 61.1
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 2.0e-74 283.1 252 63.5
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 2.6e-74 282.7 247 61.1
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 5.8e-74 281.6 246 60.6
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 5.8e-74 281.6 249 61.8
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 7.6e-74 281.2 246 62.6
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 7.6e-74 281.2 259 62.2
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.3e-73 280.4 246 61.4
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 1.3e-73 280.4 245 61.6
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 2.2e-73 279.6 252 61.9
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 3.8e-73 278.9 246 59.8
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 4.9e-73 278.5 246 62.6
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 6.5e-73 278.1 245 62.4
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 1.1e-72 277.3 244 61.1
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 1.4e-72 276.9 246 62.2
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 1.4e-72 276.9 236 63.1
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 2.5e-72 276.2 247 61.9
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 3.2e-72 275.8 246 60.6
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 4.2e-72 275.4 209 66.5
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.5e-72 275.0 245 60.0
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 5.5e-72 275.0 188 69.7
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 7.1e-72 274.6 248 60.9
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 9.3e-72 274.2 290 55.2
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 9.3e-72 274.2 251 61.4
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 9.3e-72 274.2 250 60.4
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 1.2e-71 273.9 256 59.4
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 1.2e-71 273.9 256 59.4
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 1.2e-71 273.9 233 62.7
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.2e-71 273.9 233 62.7
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 1.2e-71 273.9 255 58.0
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.6e-71 273.5 249 59.8
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.6e-71 273.5 249 59.8
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.1e-71 273.1 198 68.7
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 4.6e-71 271.9 250 58.8
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 6.1e-71 271.6 267 59.2
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 6.1e-71 271.6 247 61.9
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 7.9e-71 271.2 248 60.9
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 7.9e-71 271.2 248 60.9
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 1.0e-70 270.8 254 62.6
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 1.8e-70 270.0 247 59.9
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 2.3e-70 269.6 245 61.2
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 2.3e-70 269.6 167 74.9
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 3.9e-70 268.9 247 59.5
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 5.1e-70 268.5 231 63.6
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 5.1e-70 268.5 249 57.8
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 6.7e-70 268.1 258 60.9
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 8.7e-70 267.7 289 56.1
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 2.5e-69 266.2 253 58.9
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 3.3e-69 265.8 244 59.8
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 3.3e-69 265.8 244 59.8
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 5.7e-69 265.0 248 58.1
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 9.7e-69 264.2 244 60.2
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 1.6e-68 263.5 245 59.2
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 2.2e-68 263.1 244 59.8
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 4.8e-68 261.9 248 59.7
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 6.3e-68 261.5 244 59.0
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 1.8e-67 260.0 163 75.5
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 4.1e-67 258.8 159 74.8
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 4.1e-67 258.8 244 58.6
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 4.1e-67 258.8 168 72.6
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 5.3e-67 258.5 276 54.3
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 7.7e-66 254.6 251 57.0
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 1.7e-65 253.4 188 63.3
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 3.0e-62 242.7 274 52.2
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 4.1e-59 232.3 162 71.0
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 5.9e-58 228.4 244 54.1
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 3.8e-57 225.7 181 62.4
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 5.5e-56 221.9 190 56.8
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 1.6e-55 220.3 180 61.1
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 2.4e-51 206.5 130 74.6
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 3.1e-51 206.1 248 50.4
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.2e-50 204.1 194 63.4
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 5.0e-49 198.7 110 84.5
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 3.2e-48 196.1 131 70.2
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.6e-47 193.7 147 68.7
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 6.3e-44 181.8 192 56.2
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 5.5e-40 168.7 196 52.6
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 2.8e-36 156.4 90 78.9
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 5.9e-34 148.7 157 58.0
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 5.5e-32 142.1 115 60.9
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 7.5e-29 131.7 91 69.2
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 6.3e-28 128.6 164 46.3
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.0e-22 111.3 114 56.1
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 3.7e-20 102.8 54 90.7
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.2e-15 87.8 49 77.6
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 5.2e-14 82.4 101 45.5
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 8.9e-14 81.6 65 61.5
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 2.3e-09 67.0 38 68.4
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 6.2e-07 58.9 69 43.5
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 8.0e-07 58.5 31 83.9


User provided reference genes

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