Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040277 Chenopodium quinoa HOM05D006669 ORTHO05D008440 7.9e-296 1019.6 491 100.0
AUR62003969 Chenopodium quinoa HOM05D006669 ORTHO05D008440 4.4e-230 801.2 498 81.5
EL10Ac6g15658 Beta vulgaris HOM05D006669 ORTHO05D008440 4.1e-151 538.9 424 65.3
MD15G1293100 Malus domestica HOM05D006669 ORTHO05D008440 1.3e-109 401.0 432 50.0
Potri.007G052400 Populus trichocarpa HOM05D006669 ORTHO05D008440 1.4e-106 391.0 427 47.8
Haze_15316 Corylus avellana HOM05D006669 ORTHO05D008440 3.1e-106 389.8 413 50.1
Cpa.g.sc6.52 Carica papaya HOM05D006669 ORTHO05D008440 5.3e-106 389.0 427 48.9
Ciclev10027520m.g Citrus clementina HOM05D006669 ORTHO05D008440 5.3e-106 389.0 429 49.0
Atru.chr3.203 Acer truncatum HOM05D006669 ORTHO05D008440 3.8e-104 382.9 432 47.0
CANSAT01G1540 Cannabis sativa HOM05D006669 ORTHO05D008440 4.9e-104 382.5 424 47.2
Sabra07G0046000 Salix brachista HOM05D006669 ORTHO05D008440 4.9e-104 382.5 430 47.4
Gohir.A02G153400 Gossypium hirsutum HOM05D006669 ORTHO05D008440 2.4e-103 380.2 425 49.6
Duzib147G0464 Durio zibethinus HOM05D006669 ORTHO05D008440 5.4e-103 379.0 430 48.6
Gohir.D03G027000 Gossypium hirsutum HOM05D006669 ORTHO05D008440 5.4e-103 379.0 425 49.4
Gorai.003G028700 Gossypium raimondii HOM05D006669 ORTHO05D008440 5.4e-103 379.0 425 49.4
GSVIVG01000155001 Vitis vinifera HOM05D006669 ORTHO05D008440 5.4e-103 379.0 426 49.1
TWI53G1681 Tripterygium wilfordii HOM05D006669 ORTHO05D008440 9.3e-103 378.3 429 48.3
Actinidia16443 Actinidia chinensis HOM05D006669 ORTHO05D008440 6.0e-102 375.6 429 50.3
Actinidia21236 Actinidia chinensis HOM05D006669 ORTHO05D008440 1.3e-101 374.4 429 50.1
Lj4C159G4 Lonicera japonica HOM05D006669 ORTHO05D008440 3.3e-100 369.8 425 48.7
Eucgr.I00723 Eucalyptus grandis HOM05D006669 ORTHO05D008440 1.6e-99 367.5 433 47.1
COL.COLO4_11531 Corchorus olitorius HOM05D006669 ORTHO05D008440 2.1e-99 367.1 427 47.1
Medtr5g016110 Medicago truncatula HOM05D006669 ORTHO05D008440 3.6e-99 366.3 435 46.2
TPR.G20965 Trifolium pratense HOM05D006669 ORTHO05D008440 3.6e-99 366.3 430 46.7
CSS0011361 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 6.2e-99 365.5 457 45.3
CSS0012464 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 6.2e-99 365.5 457 45.3
Rhsim08G0095700 Rhododendron simsii HOM05D006669 ORTHO05D008440 6.2e-99 365.5 418 47.8
Aqoxy6G02742 Aquilegia oxysepala HOM05D006669 ORTHO05D008440 8.1e-99 365.2 426 46.5
arahy.Tifrunner.gnm1.ann1.37Y375 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.8e-98 364.0 437 46.7
arahy.Tifrunner.gnm1.ann1.QDP4K1 Arachis hypogaea HOM05D006669 ORTHO05D008440 5.3e-98 362.5 437 46.5
RcHm_v2.0_Chr2g0107341 Rosa chinensis HOM05D006669 ORTHO05D008440 6.9e-98 362.1 421 45.4
FAN26G1063 Fragaria x ananassa HOM05D006669 ORTHO05D008440 9.0e-98 361.7 419 46.3
FAN28G0180 Fragaria x ananassa HOM05D006669 ORTHO05D008440 1.5e-97 360.9 419 46.5
Glyma.01G191500 Glycine max HOM05D006669 ORTHO05D008440 5.8e-97 359.0 427 44.7
Oeu040598.1 Olea europaea HOM05D006669 ORTHO05D008440 9.9e-97 358.2 425 48.7
Psat0s1712g0160 Pisum sativum HOM05D006669 ORTHO05D008440 1.3e-96 357.8 435 45.7
Lj2g0024438 Lotus japonicus HOM05D006669 ORTHO05D008440 1.7e-96 357.5 435 44.4
Ca_24710_v3 Cicer arietinum L. HOM05D006669 ORTHO05D008440 2.9e-96 356.7 468 42.9
Glyma.11G050600 Glycine max HOM05D006669 ORTHO05D008440 2.9e-96 356.7 427 44.0
FAN19G2999 Fragaria x ananassa HOM05D006669 ORTHO05D008440 1.1e-95 354.8 415 46.0
SalBow6G5653 Salvia bowleyana HOM05D006669 ORTHO05D008440 1.1e-95 354.8 426 45.3
PGSC0003DMG402013020 Solanum tuberosum HOM05D006669 ORTHO05D008440 1.1e-95 354.8 428 45.8
CAN.G1290.5 Capsicum annuum HOM05D006669 ORTHO05D008440 3.2e-95 353.2 425 46.4
Cc07_g06760 Coffea canephora HOM05D006669 ORTHO05D008440 1.6e-94 350.9 426 46.0
Lalb_Chr09g0323441 Lupinus albus HOM05D006669 ORTHO05D008440 2.1e-94 350.5 429 43.6
THA.LOC104807621 Tarenaya hassleriana HOM05D006669 ORTHO05D008440 3.5e-94 349.7 425 45.2
Nitab4.5_0004400g0020 Nicotiana tabacum HOM05D006669 ORTHO05D008440 6.0e-94 349.0 432 46.5
Sopen02g014840 Solanum pennellii HOM05D006669 ORTHO05D008440 1.8e-93 347.4 425 45.6
ClCG01G017320 Citrullus lanatus HOM05D006669 ORTHO05D008440 3.9e-93 346.3 427 44.3
Phvul.002G013400 Phaseolus vulgaris HOM05D006669 ORTHO05D008440 2.5e-92 343.6 428 44.2
Solyc02g064740.3 Solanum lycopersicum HOM05D006669 ORTHO05D008440 4.3e-92 342.8 425 45.4
AT4G37480 Arabidopsis thaliana HOM05D006669 ORTHO05D008440 7.4e-92 342.0 428 44.2
CsaV3_6G043850 Cucumis sativus L. HOM05D006669 ORTHO05D008440 3.7e-91 339.7 421 45.4
C03p79320 Brassica napus HOM05D006669 ORTHO05D008440 4.8e-91 339.3 428 45.3
Carub.0007s0280 Capsella rubella HOM05D006669 ORTHO05D008440 4.8e-91 339.3 425 44.7
Sp7g35160 Schrenkiella parvula HOM05D006669 ORTHO05D008440 8.1e-91 338.6 428 44.2
BcaB03g12341 Brassica carinata HOM05D006669 ORTHO05D008440 1.4e-90 337.8 429 44.1
AL7G13310 Arabidopsis lyrata HOM05D006669 ORTHO05D008440 1.8e-90 337.4 427 43.8
BolC3t20175H Brassica oleracea HOM05D006669 ORTHO05D008440 1.8e-90 337.4 428 44.4
Sed0019482 Sechium edule HOM05D006669 ORTHO05D008440 2.4e-90 337.0 416 44.2
A08p22660 Brassica napus HOM05D006669 ORTHO05D008440 4.0e-90 336.3 428 44.4
BraA08t34233Z Brassica rapa HOM05D006669 ORTHO05D008440 4.0e-90 336.3 428 44.4
Nitab4.5_0001772g0050 Nicotiana tabacum HOM05D006669 ORTHO05D008440 4.0e-90 336.3 415 45.5
SGA_v2.0_scaffold15G07411 Striga asiatica HOM05D006669 ORTHO05D008440 1.5e-89 334.3 428 46.3
BcaC01g00401 Brassica carinata HOM05D006669 ORTHO05D008440 2.0e-89 334.0 428 44.2
Migut.H00372 Erythranthe guttata HOM05D006669 ORTHO05D008440 2.6e-89 333.6 427 43.8
Thhalv10024891m.g Eutrema salsugineum HOM05D006669 ORTHO05D008440 4.5e-89 332.8 418 44.7
CiPaw.02G004600 Carya illinoinensis HOM05D006669 ORTHO05D008440 1.7e-88 330.9 395 45.6
ATR0030G057 Amborella trichopoda HOM05D006669 ORTHO05D008440 6.5e-88 328.9 436 42.9
CARHR245880 Cardamine hirsuta HOM05D006669 ORTHO05D008440 1.9e-87 327.4 428 43.2
Manes.12G112200 Manihot esculenta HOM05D006669 ORTHO05D008440 4.2e-87 326.2 387 47.8
HanXRQChr12g0376911 Helianthus annuus HOM05D006669 ORTHO05D008440 9.3e-87 325.1 427 44.0
TAR381G0156 Trochodendron aralioides HOM05D006669 ORTHO05D008440 4.6e-86 322.8 396 48.0
ECA246G2447 Erigeron canadensis HOM05D006669 ORTHO05D008440 3.9e-85 319.7 428 45.1
MELO3C007610.2 Cucumis melo HOM05D006669 ORTHO05D008440 1.3e-83 314.7 423 41.8
VMungo1215G2631 Vigna mungo HOM05D006669 ORTHO05D008440 1.3e-83 314.7 429 41.3
Lsat_1_v5_gn_3_88261 Lactuca sativa HOM05D006669 ORTHO05D008440 3.7e-83 313.2 414 43.7
Aa31LG6G14350 Aethionema arabicum HOM05D006669 ORTHO05D008440 2.6e-81 307.0 440 42.5
Sc16g0000050 Simmondsia chinensis HOM05D006669 ORTHO05D008440 1.2e-78 298.1 271 56.1
Nn1g04622 Nelumbo nucifera HOM05D006669 ORTHO05D008440 1.5e-76 291.2 430 42.3
Peaxi162Scf01526g00017 Petunia axillaris HOM05D006669 ORTHO05D008440 2.6e-73 280.4 426 40.4
Thecc.01G068300 Theobroma cacao HOM05D006669 ORTHO05D008440 3.6e-70 270.0 272 54.0
SEGI_27298 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 1.5e-68 264.6 456 37.1
QL06p039922 Quercus lobata HOM05D006669 ORTHO05D008440 5.3e-66 256.1 278 50.7
PGR004G0108 Punica granatum HOM05D006669 ORTHO05D008440 1.2e-65 255.0 271 51.3
Prupe.6G224500 Prunus persica HOM05D006669 ORTHO05D008440 1.5e-65 254.6 275 50.9
MSTRG.2837 Avicennia marina HOM05D006669 ORTHO05D008440 8.5e-64 248.8 270 49.3
DCAR_025954 Daucus carota HOM05D006669 ORTHO05D008440 5.5e-63 246.1 273 49.8
FvH4_1g17190 Fragaria vesca HOM05D006669 ORTHO05D008440 3.6e-62 243.4 265 49.1
Hma1.2p1_1506F.1_g287540 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 4.8e-59 233.0 270 48.5
Os03g0761700 Oryza sativa ssp. japonica HOM05D006669 ORTHO05D008440 2.2e-56 224.2 423 34.3
Hma1.2p1_1506F.1_g287530 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 1.0e-53 215.3 217 53.0
vmacro17989 Vaccinium macrocarpon HOM05D006669 ORTHO05D008440 4.2e-47 193.4 183 54.1
Mapoly0045s0047 Marchantia polymorpha HOM05D006669 ORTHO05D008440 7.2e-47 192.6 415 33.3
Zm00001eb214300 Zea mays HOM05D006669 ORTHO05D008440 7.2e-47 192.6 268 42.2
unitig_62.g23421 Utricularia gibba HOM05D006669 ORTHO05D008440 2.0e-44 184.5 340 37.1
HPP92_000758 Vanilla planifolia HOM05D006669 ORTHO05D008440 5.9e-41 172.9 276 37.0
Pp3c5_10140 Physcomitrium patens HOM05D006669 ORTHO05D008440 2.4e-34 151.0 424 29.0
Manes.01G047215 Manihot esculenta HOM05D006669 ORTHO05D008440 1.3e-32 145.2 93 64.5
AagrBONN_evm.TU.Sc2ySwM_228.5150 Anthoceros agrestis HOM05D006669 ORTHO05D008440 2.9e-32 144.1 417 29.5
QL06p039919 Quercus lobata HOM05D006669 ORTHO05D008440 3.0e-29 134.0 93 60.2
HanXRQChr08g0218031 Helianthus annuus HOM05D006669 ORTHO05D008440 9.8e-28 129.0 94 66.0
Hma1.2p1_1506F.1_g287550 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 6.4e-27 126.3 83 65.1
TPR.G627 Trifolium pratense HOM05D006669 ORTHO05D008440 3.3e-23 114.0 126 48.4
GSVIVG01000157001 Vitis vinifera HOM05D006669 ORTHO05D008440 1.8e-21 108.2 125 48.0
SEGI_19371 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 2.3e-21 107.8 109 45.9
Glyma.01G216100 Glycine max HOM05D006669 ORTHO05D008440 9.5e-15 85.9 69 53.6
Manes.07G077122 Manihot esculenta HOM05D006669 ORTHO05D008440 4.0e-13 80.5 57 57.9
HPP92_000757 Vanilla planifolia HOM05D006669 ORTHO05D008440 7.5e-12 76.3 67 47.8
Dinv26898 Davidia involucrata HOM05D006669 ORTHO05D008440 2.4e-10 71.2 60 50.0
Zm00001eb058160 Zea mays HOM05D006669 ORTHO05D008440 9.2e-10 69.3 50 66.0


User provided reference genes

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