Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 0.0e+00 1895.9 979 100.0
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 0.0e+00 1708.7 979 91.4
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 0.0e+00 1508.0 985 79.3
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 0.0e+00 1371.7 980 73.1
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 0.0e+00 1291.9 986 67.2
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 0.0e+00 1128.6 983 59.4
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 3.2e-288 995.3 982 55.8
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.2e-282 976.9 992 54.8
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 1.7e-281 973.0 978 54.0
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.4e-280 969.9 992 54.6
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 1.6e-279 966.5 980 54.0
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 3.5e-279 965.3 980 54.2
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 8.7e-278 960.7 989 54.2
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 6.9e-275 951.0 981 54.1
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 2.6e-274 949.1 978 52.7
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 1.0e-273 947.2 981 53.5
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 2.9e-273 945.7 981 53.4
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 5.5e-272 941.4 981 53.1
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 7.2e-272 941.0 981 53.2
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 1.1e-267 927.2 981 52.8
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 3.4e-266 922.2 975 52.7
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 4.5e-266 921.8 980 51.6
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 5.9e-266 921.4 983 52.1
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 3.8e-265 918.7 977 51.3
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 1.6e-263 913.3 979 51.3
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 7.9e-263 911.0 980 51.4
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 1.1e-261 907.1 975 53.1
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 1.3e-260 903.7 999 51.6
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 6.3e-260 901.4 980 51.3
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 1.3e-257 893.6 980 51.2
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.6e-255 886.7 980 51.2
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 5.7e-253 878.2 996 50.0
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 9.1e-251 870.9 980 50.0
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 1.6e-250 870.2 978 50.1
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 5.9e-250 868.2 982 48.4
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 3.8e-249 865.5 981 50.1
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 5.0e-249 865.1 983 48.5
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 4.7e-247 858.6 984 49.5
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.8e-246 856.7 921 52.3
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 1.1e-245 854.0 984 49.3
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 1.5e-245 853.6 984 49.2
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 2.2e-244 849.7 847 54.8
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 2.8e-244 849.4 980 48.2
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 3.7e-244 849.0 981 49.3
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 2.7e-242 842.8 985 48.6
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 2.7e-242 842.8 981 49.1
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 1.3e-241 840.5 982 47.9
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 1.3e-241 840.5 982 48.0
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 3.8e-241 839.0 993 47.1
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 3.8e-241 839.0 980 47.8
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 8.5e-241 837.8 985 48.7
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 4.2e-240 835.5 987 47.4
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 9.4e-240 834.3 980 47.9
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 1.6e-239 833.6 980 48.6
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 1.0e-238 830.9 984 49.1
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 9.8e-237 824.3 976 48.0
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 4.8e-236 822.0 979 48.2
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 1.4e-235 820.5 973 47.3
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 1.4e-235 820.5 985 47.8
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 1.8e-235 820.1 977 47.0
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 2.4e-235 819.7 985 48.4
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 3.1e-235 819.3 977 47.2
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 3.1e-235 819.3 981 46.3
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 2.0e-234 816.6 988 48.0
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 8.5e-233 811.2 979 46.3
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 5.5e-232 808.5 980 46.7
HanXRQChr12g0373111 Helianthus annuus HOM05D000726 ORTHO05D007554 5.5e-232 808.5 975 47.0
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 2.7e-231 806.2 977 47.9
Aqoxy6G02647 Aquilegia oxysepala HOM05D000726 ORTHO05D007554 3.6e-231 805.8 981 47.8
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 2.8e-228 796.2 977 48.3
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 4.9e-228 795.4 976 45.5
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 4.9e-228 795.4 982 46.1
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 8.3e-228 794.7 922 49.9
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 1.6e-226 790.4 976 45.2
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 1.5e-224 783.9 986 45.5
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 2.5e-224 783.1 985 45.5
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 2.6e-221 773.1 976 45.6
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 3.7e-220 769.2 990 46.1
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.0e-218 763.5 976 44.4
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 1.7e-217 760.4 1032 44.3
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 2.5e-216 756.5 984 44.4
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 2.5e-216 756.5 920 48.7
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 2.8e-215 753.1 980 45.4
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 4.7e-215 752.3 988 45.0
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 2.9e-212 743.0 982 44.9
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 4.6e-210 735.7 1007 43.8
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 9.5e-208 728.0 699 55.9
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 6.8e-206 721.8 986 43.6
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.0e-205 720.3 976 42.9
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 4.3e-200 702.6 658 57.3
GSVIVG01000124001 Vitis vinifera HOM05D000726 ORTHO05D007554 5.6e-200 702.2 980 45.7
SalBow3G2688 Salvia bowleyana HOM05D000726 ORTHO05D007554 4.7e-191 672.5 890 45.6
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 6.8e-190 668.7 975 41.2
Cpa.g.sc6.26 Carica papaya HOM05D000726 ORTHO05D007554 2.4e-187 660.2 607 59.0
A07p32680 Brassica napus HOM05D000726 ORTHO05D007554 1.4e-171 607.8 598 55.5
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 7.9e-170 602.1 979 37.8
ATR0208G028 Amborella trichopoda HOM05D000726 ORTHO05D007554 4.6e-154 549.7 628 49.5
CDE04G3158 Ceratophyllum demersum HOM05D000726 ORTHO05D007554 1.5e-144 518.1 948 38.1
unitig_0.g505 Utricularia gibba HOM05D000726 ORTHO05D007554 1.1e-142 511.9 1025 34.9
Os03g0616500 Oryza sativa ssp. japonica HOM05D000726 ORTHO05D007554 2.9e-132 477.2 634 42.1
SEGI_06920 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 4.7e-122 443.4 613 43.6
Mapoly0045s0033 Marchantia polymorpha HOM05D000726 ORTHO05D007554 1.0e-116 425.6 907 33.5
SEGI_38739 Sequoiadendron giganteum HOM05D000726 ORTHO05D007554 3.0e-113 414.1 651 41.2
SMO364G0657 Selaginella moellendorffii HOM05D000726 ORTHO05D007554 1.2e-112 412.1 582 42.1
AagrBONN_evm.TU.Sc2ySwM_117.495 Anthoceros agrestis HOM05D000726 ORTHO05D007554 1.4e-110 405.2 596 41.8
HPP92_028352 Vanilla planifolia HOM05D000726 ORTHO05D007554 8.6e-108 396.0 583 40.1
HPP92_014039 Vanilla planifolia HOM05D000726 ORTHO05D007554 1.1e-99 369.0 295 62.4
Glyma.11G048432 Glycine max HOM05D000726 ORTHO05D007554 6.2e-90 336.7 236 72.9
CiPaw.01G005300 Carya illinoinensis HOM05D000726 ORTHO05D007554 8.9e-81 306.2 443 41.5
HPP92_014040 Vanilla planifolia HOM05D000726 ORTHO05D007554 2.1e-74 285.0 647 30.9
Cpa.g.sc6.25 Carica papaya HOM05D000726 ORTHO05D007554 6.2e-66 256.9 374 42.5
CiPaw.01G005400 Carya illinoinensis HOM05D000726 ORTHO05D007554 7.6e-64 250.0 154 79.9
CBR_g29418 Chara braunii HOM05D000019 ORTHO05D000002 6.4e-63 246.9 339 38.3
Glyma.11G048366 Glycine max HOM05D000726 ORTHO05D007554 4.8e-58 230.7 395 35.9
PRCOL_00006071 Prasinoderma coloniale HOM05D000726 ORTHO05D007554 1.5e-51 209.1 329 35.6
Nn1g04578 Nelumbo nucifera HOM05D000726 ORTHO05D007554 1.1e-46 193.0 282 39.4
Cre06.g262800 Chlamydomonas reinhardtii HOM05D000726 ORTHO05D007554 4.6e-45 187.6 315 36.5
RcHm_v2.0_Chr2g0138441 Rosa chinensis HOM05D000726 ORTHO05D007554 7.9e-45 186.8 403 35.5
Oeu003558.1 Olea europaea HOM05D000726 ORTHO05D007554 1.2e-29 136.3 97 67.0
Sabra16G0084600 Salix brachista HOM05D000726 ORTHO05D007554 2.0e-27 129.0 97 64.9
Sabra11G0026400 Salix brachista HOM05D000726 ORTHO05D007554 2.2e-26 125.6 86 69.8
Sabra11G0056500 Salix brachista HOM05D000726 ORTHO05D007554 6.9e-25 120.6 86 68.6
ATR0208G027 Amborella trichopoda HOM05D000726 ORTHO05D007554 3.4e-24 118.2 309 32.0
Glyma.08G243550 Glycine max HOM05D000726 ORTHO05D025659 2.2e-23 115.5 169 40.2
Psat0s3193g0080 Pisum sativum HOM05D000726 ORTHO05D025659 4.2e-14 84.7 122 38.5
Nn1g04577 Nelumbo nucifera HOM05D000726 ORTHO05D007554 7.2e-14 84.0 111 44.1
Psat3g174600 Pisum sativum HOM05D000726 ORTHO05D025659 1.8e-12 79.3 108 40.7
Psat3g172760 Pisum sativum HOM05D000726 ORTHO05D025659 6.7e-12 77.4 122 35.2
Psat3g174680 Pisum sativum HOM05D000726 ORTHO05D025659 2.6e-11 75.5 122 35.2
SEGI_23696 Sequoiadendron giganteum HOM05D000726 ORTHO05D000001 1.3e-10 73.2 358 25.1
Lsat_1_v5_gn_2_113660 Lactuca sativa HOM05D000726 ORTHO05D007554 2.7e-08 65.5 49 59.2
Lj7C94G0 Lonicera japonica HOM05D000726 ORTHO05D007554 4.5e-08 64.7 63 58.7


User provided reference genes

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