Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.1e-206 723.0 363 100.0
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.1e-84 317.8 261 69.7
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 1.5e-78 297.4 304 57.2
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 7.7e-70 268.5 286 53.5
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 8.5e-69 265.0 342 50.3
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 1.6e-67 260.8 340 48.8
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 7.9e-67 258.5 305 49.5
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 1.4e-66 257.7 283 50.9
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 1.4e-66 257.7 283 50.9
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 3.9e-66 256.1 296 49.7
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 2.0e-65 253.8 423 41.1
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 2.5e-65 253.4 287 50.9
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 4.3e-65 252.7 303 50.2
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 5.7e-65 252.3 284 51.4
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 7.4e-65 251.9 300 49.7
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 7.4e-65 251.9 297 49.8
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 9.7e-65 251.5 256 53.5
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 9.7e-65 251.5 293 51.9
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 1.3e-64 251.1 287 50.9
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 1.3e-64 251.1 279 51.6
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 2.8e-64 250.0 309 49.2
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 3.7e-64 249.6 305 50.2
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 6.3e-64 248.8 295 49.2
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 8.2e-64 248.4 295 50.8
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 8.2e-64 248.4 285 49.8
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 1.1e-63 248.1 270 52.6
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 1.8e-63 247.3 311 48.6
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 1.8e-63 247.3 264 51.5
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 3.1e-63 246.5 290 51.7
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 5.3e-63 245.7 256 52.3
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 5.3e-63 245.7 313 47.3
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 5.3e-63 245.7 312 48.1
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 5.3e-63 245.7 306 48.4
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 5.3e-63 245.7 278 52.2
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 6.9e-63 245.4 289 50.5
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 1.2e-62 244.6 269 51.3
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 2.6e-62 243.4 312 45.5
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.3e-61 241.1 278 48.6
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 1.3e-61 241.1 294 49.7
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 3.8e-61 239.6 256 52.3
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 5.0e-61 239.2 269 49.4
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 5.0e-61 239.2 313 47.6
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 8.5e-61 238.4 292 47.9
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 8.5e-61 238.4 268 50.4
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 1.1e-60 238.0 301 48.2
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.1e-60 238.0 309 46.6
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 1.4e-60 237.7 311 45.0
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 4.2e-60 236.1 268 51.5
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 9.4e-60 235.0 312 47.1
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 9.4e-60 235.0 268 49.6
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 1.6e-59 234.2 324 44.4
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 1.6e-59 234.2 312 47.1
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 2.1e-59 233.8 292 50.0
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 6.1e-59 232.3 298 48.3
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 6.1e-59 232.3 262 50.4
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 1.0e-58 231.5 271 50.2
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 1.0e-58 231.5 309 44.7
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 1.4e-58 231.1 268 50.4
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 2.3e-58 230.3 292 46.9
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 2.3e-58 230.3 264 50.0
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 2.3e-58 230.3 284 50.0
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 3.0e-58 229.9 262 50.4
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 5.1e-58 229.2 221 54.3
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 6.7e-58 228.8 318 46.5
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 8.8e-58 228.4 261 51.3
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 1.1e-57 228.0 296 47.6
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 2.0e-57 227.3 293 46.1
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 2.6e-57 226.9 224 54.0
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 2.6e-57 226.9 209 56.5
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 4.4e-57 226.1 269 49.8
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 7.4e-57 225.3 298 47.7
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 1.3e-56 224.6 265 49.8
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 1.3e-56 224.6 294 45.9
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 1.7e-56 224.2 269 47.2
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 1.7e-56 224.2 307 45.3
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 2.2e-56 223.8 308 45.1
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 3.7e-56 223.0 297 44.4
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 4.8e-56 222.6 300 46.7
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 6.3e-56 222.2 312 45.5
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 1.8e-55 220.7 350 40.0
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 1.8e-55 220.7 304 45.7
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 4.1e-55 219.5 294 44.2
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 5.3e-55 219.2 304 45.1
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 7.0e-55 218.8 291 45.0
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 7.0e-55 218.8 286 47.6
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 1.2e-54 218.0 256 46.5
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 2.0e-54 217.2 298 46.0
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 3.5e-54 216.5 360 41.7
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 5.9e-54 215.7 298 45.3
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 7.7e-54 215.3 308 43.8
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 1.7e-53 214.2 208 53.4
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 2.2e-53 213.8 308 43.8
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 8.5e-53 211.8 305 45.6
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 8.5e-53 211.8 300 45.7
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.4e-52 211.1 324 42.9
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 9.4e-52 208.4 296 45.9
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 3.6e-51 206.5 294 42.9
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 4.4e-49 199.5 272 45.2
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 8.2e-48 195.3 236 47.5
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 2.6e-46 190.3 221 48.4
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 2.9e-45 186.8 217 48.8
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 6.1e-43 179.1 239 45.6
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 1.0e-42 178.3 255 41.6
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 6.7e-42 175.6 294 36.1
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 3.3e-41 173.3 270 39.6
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 4.4e-41 172.9 264 40.2
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 9.7e-41 171.8 202 46.5
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 2.4e-39 167.2 245 44.9
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 3.5e-38 163.3 224 47.8
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 2.5e-36 157.1 269 37.9
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 5.5e-36 156.0 112 63.4
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 1.4e-34 151.4 247 38.9
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 4.4e-33 146.4 302 35.1
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 7.0e-31 139.0 276 34.8
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 5.9e-30 136.0 169 48.5
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 4.0e-26 123.2 262 33.6
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 3.4e-25 120.2 214 39.7
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 2.4e-23 114.0 231 36.4
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 5.4e-23 112.8 89 59.6
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 5.4e-23 112.8 81 63.0
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 4.3e-20 103.2 93 53.8
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 5.8e-17 92.8 125 46.4
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 4.3e-12 76.6 64 53.1


User provided reference genes

Program Settings