Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040065 Chenopodium quinoa HOM05D004113 ORTHO05D005233 6.1e-67 257.3 126 100.0
AUR62022459 Chenopodium quinoa HOM05D004113 ORTHO05D005233 3.5e-62 241.5 126 94.4
EL10Ac1g01806 Beta vulgaris HOM05D004113 ORTHO05D005233 7.0e-47 190.7 123 78.0
Dinv06063 Davidia involucrata HOM05D004113 ORTHO05D005233 1.7e-32 142.9 118 62.7
MD01G1038300 Malus domestica HOM05D004113 ORTHO05D005233 3.2e-31 138.7 116 60.3
DCAR_001364 Daucus carota HOM05D004113 ORTHO05D005233 4.1e-31 138.3 118 61.0
Hma1.2p1_0528F.1_g173060 Hydrangea macrophylla HOM05D004113 ORTHO05D005233 4.1e-31 138.3 120 59.2
Prupe.6G197400 Prunus persica HOM05D004113 ORTHO05D005233 1.6e-30 136.3 116 59.5
Oeu004248.1 Olea europaea HOM05D004113 ORTHO05D005233 3.5e-30 135.2 122 54.9
RhsimUnG0017500 Rhododendron simsii HOM05D004113 ORTHO05D005233 3.5e-30 135.2 118 57.6
QL06p029175 Quercus lobata HOM05D004113 ORTHO05D005233 7.8e-30 134.0 118 58.5
Cfa002816 Carpinus fangiana HOM05D004113 ORTHO05D005233 1.0e-29 133.7 118 58.5
Atru.chr4.844 Acer truncatum HOM05D004113 ORTHO05D005233 1.3e-29 133.3 118 56.8
Ciclev10002604m.g Citrus clementina HOM05D004113 ORTHO05D005233 1.3e-29 133.3 120 56.7
CiPaw.03G129200 Carya illinoinensis HOM05D004113 ORTHO05D005233 1.7e-29 132.9 120 56.7
Lj1g0003494 Lotus japonicus HOM05D004113 ORTHO05D005233 1.7e-29 132.9 118 55.9
Lalb_Chr08g0238441 Lupinus albus HOM05D004113 ORTHO05D005233 1.7e-29 132.9 123 51.2
Sc01g0006950 Simmondsia chinensis HOM05D004113 ORTHO05D005233 1.7e-29 132.9 123 52.8
Actinidia06637 Actinidia chinensis HOM05D004113 ORTHO05D005233 2.3e-29 132.5 118 56.8
Haze_25111 Corylus avellana HOM05D004113 ORTHO05D005233 2.3e-29 132.5 118 57.6
RhsimUnG0133000 Rhododendron simsii HOM05D004113 ORTHO05D005233 2.3e-29 132.5 118 59.3
Migut.L00890 Erythranthe guttata HOM05D004113 ORTHO05D005233 5.1e-29 131.3 118 57.6
Migut.H00735 Erythranthe guttata HOM05D004113 ORTHO05D005233 6.6e-29 131.0 118 57.6
VMungo1309G2376 Vigna mungo HOM05D004113 ORTHO05D005233 6.6e-29 131.0 118 55.1
Ca_16933_v3 Cicer arietinum L. HOM05D004113 ORTHO05D005233 1.5e-28 129.8 118 54.2
Glyma.04G214000 Glycine max HOM05D004113 ORTHO05D005233 1.5e-28 129.8 118 54.2
Medtr3g095980 Medicago truncatula HOM05D004113 ORTHO05D005233 1.5e-28 129.8 121 53.7
COL.COLO4_35683 Corchorus olitorius HOM05D004113 ORTHO05D005233 2.5e-28 129.0 118 54.2
Psat0s10365g0080 Pisum sativum HOM05D004113 ORTHO05D005233 2.5e-28 129.0 121 52.9
Psat5g060000 Pisum sativum HOM05D004113 ORTHO05D005233 2.5e-28 129.0 121 52.9
Glyma.06G152400 Glycine max HOM05D004113 ORTHO05D005233 4.3e-28 128.3 118 55.1
MD15G1314600 Malus domestica HOM05D004113 ORTHO05D005233 4.3e-28 128.3 116 56.0
TPR.G34657 Trifolium pratense HOM05D004113 ORTHO05D005233 4.3e-28 128.3 121 52.9
VMungo0251G1253 Vigna mungo HOM05D004113 ORTHO05D005233 4.3e-28 128.3 118 55.1
Cpa.g.sc42.138 Carica papaya HOM05D004113 ORTHO05D005233 5.6e-28 127.9 116 55.2
Phvul.009G149400 Phaseolus vulgaris HOM05D004113 ORTHO05D005233 5.6e-28 127.9 118 54.2
Peaxi162Scf00589g00001 Petunia axillaris HOM05D004113 ORTHO05D005233 7.3e-28 127.5 123 54.5
Solyc11g005820.1 Solanum lycopersicum HOM05D004113 ORTHO05D005233 1.2e-27 126.7 122 55.7
PGSC0003DMG400028678 Solanum tuberosum HOM05D004113 ORTHO05D005233 2.1e-27 125.9 120 54.2
Nn5g28620 Nelumbo nucifera HOM05D004113 ORTHO05D005233 2.8e-27 125.6 118 52.5
TWI75G0632 Tripterygium wilfordii HOM05D004113 ORTHO05D005233 3.6e-27 125.2 118 51.7
Sopen11g001780 Solanum pennellii HOM05D004113 ORTHO05D005233 4.7e-27 124.8 122 54.9
TAR628G1510 Trochodendron aralioides HOM05D004113 ORTHO05D005233 6.2e-27 124.4 118 55.1
CAN.G1163.3 Capsicum annuum HOM05D004113 ORTHO05D005233 8.1e-27 124.0 120 55.0
Duzib147G1472 Durio zibethinus HOM05D004113 ORTHO05D005233 1.4e-26 123.2 118 51.7
Lalb_Chr00c34g0408621 Lupinus albus HOM05D004113 ORTHO05D005233 1.4e-26 123.2 119 54.6
Lalb_Chr12g0203181 Lupinus albus HOM05D004113 ORTHO05D005233 1.4e-26 123.2 119 54.6
Thecc.01G128300 Theobroma cacao HOM05D004113 ORTHO05D005233 1.8e-26 122.9 118 51.7
RcHm_v2.0_Chr2g0120401 Rosa chinensis HOM05D004113 ORTHO05D005233 3.1e-26 122.1 118 54.2
FvH4_1g24160 Fragaria vesca HOM05D004113 ORTHO05D005233 6.8e-26 120.9 116 53.4
FAN19G1994 Fragaria x ananassa HOM05D004113 ORTHO05D005233 6.8e-26 120.9 116 53.4
Oeu047690.1 Olea europaea HOM05D004113 ORTHO05D005233 6.8e-26 120.9 118 52.5
Cc07_g18140 Coffea canephora HOM05D004113 ORTHO05D005233 1.5e-25 119.8 118 52.5
FAN16G3582 Fragaria x ananassa HOM05D004113 ORTHO05D005233 1.5e-25 119.8 116 53.4
CANSAT01G1731 Cannabis sativa HOM05D004113 ORTHO05D005233 2.0e-25 119.4 118 53.4
CANSAT01G2965 Cannabis sativa HOM05D004113 ORTHO05D005233 2.0e-25 119.4 118 53.4
FAN26G3157 Fragaria x ananassa HOM05D004113 ORTHO05D005233 2.0e-25 119.4 116 52.6
HanXRQChr12g0368871 Helianthus annuus HOM05D004113 ORTHO05D005233 2.0e-25 119.4 118 51.7
MSTRG.23446 Avicennia marina HOM05D004113 ORTHO05D005233 4.4e-25 118.2 116 52.6
Potri.007G108301 Populus trichocarpa HOM05D004113 ORTHO05D005233 7.6e-25 117.5 105 56.2
Gorai.003G067200 Gossypium raimondii HOM05D004113 ORTHO05D005233 1.7e-24 116.3 91 59.3
arahy.Tifrunner.gnm1.ann1.FMR9EU Arachis hypogaea HOM05D004113 ORTHO05D005233 2.2e-24 115.9 116 50.9
arahy.Tifrunner.gnm1.ann1.PRK495 Arachis hypogaea HOM05D004113 ORTHO05D005233 2.2e-24 115.9 116 50.9
FAN28G2384 Fragaria x ananassa HOM05D004113 ORTHO05D005233 2.2e-24 115.9 116 51.7
Gohir.D10G106500 Gossypium hirsutum HOM05D004113 ORTHO05D005233 3.8e-24 115.2 118 47.5
Gohir.A10G084907 Gossypium hirsutum HOM05D004113 ORTHO05D005233 4.9e-24 114.8 118 47.5
Gohir.A11G230200 Gossypium hirsutum HOM05D004113 ORTHO05D005233 6.4e-24 114.4 91 58.2
BcaB02g09804 Brassica carinata HOM05D004113 ORTHO05D005233 1.1e-23 113.6 118 46.6
Gohir.D11G230300 Gossypium hirsutum HOM05D004113 ORTHO05D005233 1.1e-23 113.6 91 57.1
Lsat_1_v5_gn_8_17501 Lactuca sativa HOM05D004113 ORTHO05D005233 1.9e-23 112.8 118 49.2
Nitab4.5_0000805g0060 Nicotiana tabacum HOM05D004113 ORTHO05D005233 1.9e-23 112.8 85 63.5
Nitab4.5_0011816g0010 Nicotiana tabacum HOM05D004113 ORTHO05D005233 1.9e-23 112.8 85 63.5
PSO063G6208 Papaver somniferum HOM05D004113 ORTHO05D005233 2.4e-23 112.5 118 48.3
PSO782G3380 Papaver somniferum HOM05D004113 ORTHO05D005233 3.2e-23 112.1 118 48.3
Carub.0008s2541 Capsella rubella HOM05D004113 ORTHO05D005233 4.2e-23 111.7 118 47.5
CARHR278590 Cardamine hirsuta HOM05D004113 ORTHO05D005233 7.1e-23 110.9 118 47.5
BolC3t18417H Brassica oleracea HOM05D004113 ORTHO05D005233 9.3e-23 110.5 118 46.6
BcaC01g02693 Brassica carinata HOM05D004113 ORTHO05D005233 2.1e-22 109.4 118 45.8
C03p61570 Brassica napus HOM05D004113 ORTHO05D005233 2.1e-22 109.4 118 45.8
AT5G64620 Arabidopsis thaliana HOM05D004113 ORTHO05D005233 3.5e-22 108.6 118 46.6
AL8G42030 Arabidopsis lyrata HOM05D004113 ORTHO05D005233 4.6e-22 108.2 118 46.6
CARHR287460 Cardamine hirsuta HOM05D004113 ORTHO05D005233 6.0e-22 107.8 118 45.8
BcaB04g19979 Brassica carinata HOM05D004113 ORTHO05D005233 7.8e-22 107.5 118 46.6
Gorai.011G116700 Gossypium raimondii HOM05D004113 ORTHO05D005233 7.8e-22 107.5 111 47.7
Sed0011375 Sechium edule HOM05D004113 ORTHO05D005233 7.8e-22 107.5 119 47.9
ClCG01G015470 Citrullus lanatus HOM05D004113 ORTHO05D005233 1.0e-21 107.1 118 48.3
MELO3C008049.2 Cucumis melo HOM05D004113 ORTHO05D005233 1.0e-21 107.1 118 45.8
SGA_v2.0_scaffold355G49762 Striga asiatica HOM05D004113 ORTHO05D005233 1.0e-21 107.1 118 46.6
A06p31350 Brassica napus HOM05D004113 ORTHO05D005233 1.7e-21 106.3 118 44.9
CsaV3_6G041710 Cucumis sativus L. HOM05D004113 ORTHO05D005233 2.3e-21 105.9 118 46.6
BraA06t26077Z Brassica rapa HOM05D004113 ORTHO05D005233 3.9e-21 105.1 118 44.1
Sed0024266 Sechium edule HOM05D004113 ORTHO05D005233 5.1e-21 104.8 125 44.8
Thhalv10005004m.g Eutrema salsugineum HOM05D004113 ORTHO05D005233 8.7e-21 104.0 118 45.8
HanXRQChr08g0218241 Helianthus annuus HOM05D004113 ORTHO05D005233 3.3e-20 102.1 118 45.8
Sp2g27680 Schrenkiella parvula HOM05D004113 ORTHO05D005233 3.3e-20 102.1 118 44.1
A09p08750 Brassica napus HOM05D004113 ORTHO05D005233 2.1e-19 99.4 118 43.2
BraA09t36524Z Brassica rapa HOM05D004113 ORTHO05D005233 2.1e-19 99.4 118 43.2
Aqoxy5G02176 Aquilegia oxysepala HOM05D004113 ORTHO05D005233 8.1e-19 97.4 118 44.1
BcaC04g23305 Brassica carinata HOM05D004113 ORTHO05D005233 1.1e-18 97.1 118 42.4
C09p09900 Brassica napus HOM05D004113 ORTHO05D005233 1.4e-18 96.7 118 42.4
BolC9t53899H Brassica oleracea HOM05D004113 ORTHO05D005233 1.4e-18 96.7 118 42.4
THA.LOC104799518 Tarenaya hassleriana HOM05D004113 ORTHO05D005233 1.8e-18 96.3 112 44.6
THA.LOC104819318 Tarenaya hassleriana HOM05D004113 ORTHO05D005233 4.0e-18 95.1 109 45.9
TAR628G0877 Trochodendron aralioides HOM05D004113 ORTHO05D005233 1.5e-17 93.2 118 43.2
Aa31LG1G17330 Aethionema arabicum HOM05D004113 ORTHO05D005233 3.4e-17 92.0 118 36.4
CiPaw.04G086900 Carya illinoinensis HOM05D004113 ORTHO05D005233 3.2e-15 85.5 120 44.2
TWI75G0604 Tripterygium wilfordii HOM05D004113 ORTHO05D005233 3.2e-15 85.5 127 38.6
BcaC01g02692 Brassica carinata HOM05D004113 ORTHO05D005233 7.1e-15 84.3 94 45.7
C03p61580 Brassica napus HOM05D004113 ORTHO05D005233 7.1e-15 84.3 94 45.7
CDE06G1377 Ceratophyllum demersum HOM05D004113 ORTHO05D005233 5.6e-12 74.7 87 40.2
CDE08G0148 Ceratophyllum demersum HOM05D004113 ORTHO05D005233 9.6e-12 73.9 84 40.5
Zm00001eb260280 Zea mays HOM05D004113 ORTHO05D005233 1.8e-10 69.7 80 40.0
HPP92_012690 Vanilla planifolia HOM05D004113 ORTHO05D005233 5.3e-10 68.2 122 29.5
Os08g0108100 Oryza sativa ssp. japonica HOM05D004113 ORTHO05D005233 6.9e-10 67.8 90 34.4
Zm00001eb174300 Zea mays HOM05D004113 ORTHO05D005233 6.9e-10 67.8 77 37.7
HPP92_012697 Vanilla planifolia HOM05D004113 ORTHO05D005233 9.0e-10 67.4 122 29.5
Os12g0283400 Oryza sativa ssp. japonica HOM05D004113 ORTHO05D005233 1.5e-09 66.6 83 38.6
PSO017G2443 Papaver somniferum HOM05D004113 ORTHO05D005233 3.4e-09 65.5 123 33.3
PSO837G0066 Papaver somniferum HOM05D004113 ORTHO05D005233 1.1e-07 60.5 123 33.3


User provided reference genes

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