Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040029 Chenopodium quinoa HOM05D004499 ORTHO05D004928 3.1e-160 568.5 314 100.0
AUR62044753 Chenopodium quinoa HOM05D004499 ORTHO05D004928 3.7e-97 359.0 317 66.2
AUR62042302 Chenopodium quinoa HOM05D004499 ORTHO05D004928 6.0e-79 298.5 289 62.6
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 3.5e-39 166.4 241 50.6
Ah.15g092180 Amaranthus hybridus HOM05D004499 ORTHO05D004928 1.2e-26 124.8 159 49.7
Medtr7g100830 Medicago truncatula HOM05D004499 ORTHO05D004928 1.0e-25 121.7 295 34.6
Lalb_Chr01g0018981 Lupinus albus HOM05D004499 ORTHO05D004928 1.3e-25 121.3 279 34.4
Lalb_Chr25g0289231 Lupinus albus HOM05D004499 ORTHO05D004928 1.7e-25 120.9 282 36.5
ClCG10G020450 Citrullus lanatus HOM05D004499 ORTHO05D004928 9.4e-24 115.2 317 33.8
Prupe.6G240400 Prunus persica HOM05D004499 ORTHO05D004928 1.2e-23 114.8 306 36.3
FAN05G3415 Fragaria x ananassa HOM05D004499 ORTHO05D004928 1.6e-23 114.4 327 32.7
CSS0015121 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 3.6e-23 113.2 321 37.7
Gohir.A09G151400 Gossypium hirsutum HOM05D004499 ORTHO05D004928 3.6e-23 113.2 292 35.3
Sc20g0005110 Simmondsia chinensis HOM05D004499 ORTHO05D004928 3.6e-23 113.2 310 33.5
MD04G1102600 Malus domestica HOM05D004499 ORTHO05D004928 4.6e-23 112.8 309 32.4
Potri.006G130500 Populus trichocarpa HOM05D004499 ORTHO05D004928 1.0e-22 111.7 300 35.7
FvH4_6g15510 Fragaria vesca HOM05D004499 ORTHO05D004928 1.4e-22 111.3 332 34.3
FAN14G2800 Fragaria x ananassa HOM05D004499 ORTHO05D004928 1.4e-22 111.3 332 34.3
FAN09G3365 Fragaria x ananassa HOM05D004499 ORTHO05D004928 1.8e-22 110.9 327 34.6
Gorai.006G168200 Gossypium raimondii HOM05D004499 ORTHO05D004928 2.3e-22 110.5 289 33.9
Gohir.D09G147000 Gossypium hirsutum HOM05D004499 ORTHO05D004928 5.1e-22 109.4 289 33.9
TAR623G0879 Trochodendron aralioides HOM05D004499 ORTHO05D004928 5.1e-22 109.4 311 32.8
CSS0037383 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 6.7e-22 109.0 301 33.2
Lj5g0026303 Lotus japonicus HOM05D004499 ORTHO05D004928 6.7e-22 109.0 299 35.1
Sabra06G0102500 Salix brachista HOM05D004499 ORTHO05D004928 6.7e-22 109.0 290 34.1
CSS0026303 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 1.1e-21 108.2 301 33.9
Haze_20629 Corylus avellana HOM05D004499 ORTHO05D004928 1.5e-21 107.8 302 33.4
RcHm_v2.0_Chr3g0469011 Rosa chinensis HOM05D004499 ORTHO05D004928 1.5e-21 107.8 321 31.5
CANSAT80G2505 Cannabis sativa HOM05D004499 ORTHO05D004928 2.0e-21 107.5 324 37.0
Lj1g0000961 Lotus japonicus HOM05D004499 ORTHO05D004928 2.6e-21 107.1 315 33.0
FAN02G0924 Fragaria x ananassa HOM05D004499 ORTHO05D004928 3.3e-21 106.7 323 32.8
Gohir.A04G075800 Gossypium hirsutum HOM05D004499 ORTHO05D004928 3.3e-21 106.7 302 35.4
Thecc.05G055800 Theobroma cacao HOM05D004499 ORTHO05D004928 9.7e-21 105.1 313 34.8
CiPaw.09G179000 Carya illinoinensis HOM05D004499 ORTHO05D004928 1.3e-20 104.8 298 31.9
Glyma.03G178700 Glycine max HOM05D004499 ORTHO05D004928 2.2e-20 104.0 293 33.1
Gorai.009G419500 Gossypium raimondii HOM05D004499 ORTHO05D004928 2.2e-20 104.0 307 35.8
Cc06_g03680 Coffea canephora HOM05D004499 ORTHO05D004928 2.8e-20 103.6 331 36.3
Manes.09G078863 Manihot esculenta HOM05D004499 ORTHO05D004928 6.3e-20 102.4 302 34.1
CsaV3_3G035670 Cucumis sativus L. HOM05D004499 ORTHO05D004928 8.2e-20 102.1 323 35.6
Dinv37265 Davidia involucrata HOM05D004499 ORTHO05D004928 1.1e-19 101.7 282 33.3
Nn2g10698 Nelumbo nucifera HOM05D004499 ORTHO05D004928 1.1e-19 101.7 303 33.7
MELO3C009326.2 Cucumis melo HOM05D004499 ORTHO05D004928 1.4e-19 101.3 326 35.6
Duzib093G0117 Durio zibethinus HOM05D004499 ORTHO05D004928 1.4e-19 101.3 285 32.6
Sed0006356 Sechium edule HOM05D004499 ORTHO05D004928 2.4e-19 100.5 314 32.8
Cfa017521 Carpinus fangiana HOM05D004499 ORTHO05D004928 4.1e-19 99.8 298 31.5
TWI77G0862 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 5.3e-19 99.4 303 32.7
Lalb_Chr20g0112851 Lupinus albus HOM05D004499 ORTHO05D004928 6.9e-19 99.0 286 33.2
Hma1.2p1_0350F.1_g132810 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 9.1e-19 98.6 283 33.2
Ca_08832_v3 Cicer arietinum L. HOM05D004499 ORTHO05D004928 2.0e-18 97.4 288 37.5
Sabra16G0093100 Salix brachista HOM05D004499 ORTHO05D004928 2.0e-18 97.4 291 34.0
TWI53G1356 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 2.0e-18 97.4 310 34.5
Hma1.2p1_0111F.1_g054000 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 3.4e-18 96.7 298 32.9
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 5.9e-18 95.9 293 36.9
Psat3g044200 Pisum sativum HOM05D004499 ORTHO05D004928 7.7e-18 95.5 291 34.4
Cpa.g.sc174.12 Carica papaya HOM05D004499 ORTHO05D004928 2.2e-17 94.0 293 32.8
QL07p045089 Quercus lobata HOM05D004499 ORTHO05D004928 2.2e-17 94.0 310 32.9
MSTRG.26719 Avicennia marina HOM05D004499 ORTHO05D004928 6.5e-17 92.4 316 31.3
Potri.016G086900 Populus trichocarpa HOM05D004499 ORTHO05D004928 6.5e-17 92.4 303 30.0
THA.LOC104806496 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 1.1e-16 91.7 297 31.3
Glyma.19G179400 Glycine max HOM05D004499 ORTHO05D004928 2.1e-15 87.4 283 31.4
CiPaw.10G136800 Carya illinoinensis HOM05D004499 ORTHO05D004928 2.7e-15 87.0 302 32.1
Manes.08G004109 Manihot esculenta HOM05D004499 ORTHO05D004928 2.7e-15 87.0 176 40.3
Manes.08G004117 Manihot esculenta HOM05D004499 ORTHO05D004928 2.7e-15 87.0 176 40.3
SalBow3G3210 Salvia bowleyana HOM05D004499 ORTHO05D004928 2.7e-15 87.0 312 30.4
Sed0022446 Sechium edule HOM05D004499 ORTHO05D004928 2.7e-15 87.0 314 30.3
Manes.08G004114 Manihot esculenta HOM05D004499 ORTHO05D004928 3.6e-15 86.7 176 39.8
Manes.08G004120 Manihot esculenta HOM05D004499 ORTHO05D004928 3.6e-15 86.7 176 39.8
Manes.08G004126 Manihot esculenta HOM05D004499 ORTHO05D004928 3.6e-15 86.7 176 39.8
VMungo1383G2757 Vigna mungo HOM05D004499 ORTHO05D004928 3.6e-15 86.7 304 30.3
Manes.08G004127 Manihot esculenta HOM05D004499 ORTHO05D004928 6.1e-15 85.9 176 40.3
Manes.08G004131 Manihot esculenta HOM05D004499 ORTHO05D004928 6.1e-15 85.9 176 40.3
MSTRG.19143 Avicennia marina HOM05D004499 ORTHO05D004928 7.9e-15 85.5 319 31.3
Nn2g13028 Nelumbo nucifera HOM05D004499 ORTHO05D004928 1.0e-14 85.1 329 29.8
DCAR_014968 Daucus carota HOM05D004499 ORTHO05D004928 1.8e-14 84.3 275 32.4
Lsat_1_v5_gn_6_30120 Lactuca sativa HOM05D004499 ORTHO05D004928 3.0e-14 83.6 277 35.4
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 3.0e-14 83.6 158 39.9
PGR004G1454 Punica granatum HOM05D004499 ORTHO05D004928 3.9e-14 83.2 234 34.2
Phvul.001G175400 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 6.7e-14 82.4 283 30.7
Oeu029418.1 Olea europaea HOM05D004499 ORTHO05D004928 8.8e-14 82.0 278 31.3
Medtr1g066750 Medicago truncatula HOM05D004499 ORTHO05D004928 1.5e-13 81.3 283 30.7
CARHR210240 Cardamine hirsuta HOM05D004499 ORTHO05D004928 2.6e-13 80.5 199 34.2
ECA233G0353 Erigeron canadensis HOM05D004499 ORTHO05D004928 2.6e-13 80.5 193 40.4
Solyc09g007470.2 Solanum lycopersicum HOM05D004499 ORTHO05D004928 2.6e-13 80.5 178 36.0
Sopen00g013370 Solanum pennellii HOM05D004499 ORTHO05D004928 2.8e-12 77.0 176 36.4
AL6G12390 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 4.8e-12 76.3 234 32.9
CARHR131610 Cardamine hirsuta HOM05D004499 ORTHO05D004928 1.4e-11 74.7 197 35.0
Phvul.007G164800 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 4.1e-11 73.2 280 31.4
Rhsim04G0149000 Rhododendron simsii HOM05D004499 ORTHO05D004928 4.1e-11 73.2 321 29.9
Thhalv10016942m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 9.1e-11 72.0 180 35.6
BraA02t04744Z Brassica rapa HOM05D004499 ORTHO05D004928 1.6e-10 71.2 245 29.8
RhsimUnG0115800 Rhododendron simsii HOM05D004499 ORTHO05D004928 1.6e-10 71.2 282 29.8
Sp6g39600 Schrenkiella parvula HOM05D004499 ORTHO05D004928 2.0e-10 70.9 232 33.2
Sp4g19420 Schrenkiella parvula HOM05D004499 ORTHO05D004928 2.6e-10 70.5 184 35.9
AT5G03110 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 4.5e-10 69.7 172 34.9
Aqoxy4G03228 Aquilegia oxysepala HOM05D004499 ORTHO05D004928 5.9e-10 69.3 301 30.6
AT2G37100 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 5.9e-10 69.3 221 32.6
Glyma.13G138000 Glycine max HOM05D004499 ORTHO05D004928 7.7e-10 68.9 283 29.0
THA.LOC104826978 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 1.3e-09 68.2 223 34.5
Actinidia40043 Actinidia chinensis HOM05D004499 ORTHO05D004928 2.2e-09 67.4 182 33.5
Oeu060092.2 Olea europaea HOM05D000784 ORTHO05D004928 2.9e-09 67.0 220 31.8
Sc02g0001920 Simmondsia chinensis HOM05D004499 ORTHO05D004928 2.9e-09 67.0 187 33.7
Aa31LG5G22320 Aethionema arabicum HOM05D004499 ORTHO05D004928 3.8e-09 66.6 175 38.3
DCAR_009280 Daucus carota HOM05D004499 ORTHO05D004928 3.8e-09 66.6 222 30.6
MSTRG.10304 Avicennia marina HOM05D004499 ORTHO05D004928 5.0e-09 66.2 282 26.2
PGSC0003DMG400001742 Solanum tuberosum HOM05D004499 ORTHO05D004928 5.0e-09 66.2 183 41.0
BcaB02g09303 Brassica carinata HOM05D004499 ORTHO05D004928 8.5e-09 65.5 178 33.7
Thhalv10014228m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 1.1e-08 65.1 250 30.0
THA.LOC104816329 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 2.5e-08 63.9 278 28.4
Carub.0004s1899 Capsella rubella HOM05D004499 ORTHO05D004928 4.2e-08 63.2 218 32.1
Carub.0006s0191 Capsella rubella HOM05D004499 ORTHO05D004928 4.2e-08 63.2 238 36.1
BcaC03g13031 Brassica carinata HOM05D004499 ORTHO05D004928 5.5e-08 62.8 247 30.8
C02p00790 Brassica napus HOM05D004499 ORTHO05D004928 5.5e-08 62.8 247 29.1
BolC2t06077H Brassica oleracea HOM05D004499 ORTHO05D004928 5.5e-08 62.8 247 29.1
BcaB05g21851 Brassica carinata HOM05D004499 ORTHO05D004928 7.2e-08 62.4 226 31.9
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 9.4e-08 62.0 112 40.2
BcaC02g11837 Brassica carinata HOM05D004499 ORTHO05D004928 1.2e-07 61.6 196 30.6
A05p08740 Brassica napus HOM05D004499 ORTHO05D004928 1.2e-07 61.6 164 34.1
C04p10830 Brassica napus HOM05D004499 ORTHO05D004928 1.2e-07 61.6 196 30.6
BraA05t19842Z Brassica rapa HOM05D004499 ORTHO05D004928 1.2e-07 61.6 164 34.1
Lsat_1_v5_gn_1_54160 Lactuca sativa HOM05D004499 ORTHO05D004928 2.1e-07 60.8 211 30.8
Oeu059988.1 Olea europaea HOM05D004499 ORTHO05D004928 4.7e-07 59.7 161 34.2
Glyma.10G050500 Glycine max HOM05D004499 ORTHO05D004928 6.1e-07 59.3 287 28.9
Psat6g070200 Pisum sativum HOM05D004499 ORTHO05D004928 8.0e-07 58.9 226 31.4
Migut.J00423 Erythranthe guttata HOM05D004499 ORTHO05D004928 1.0e-06 58.5 241 33.2
BolC4t22678H Brassica oleracea HOM05D004499 ORTHO05D004928 3.0e-06 57.0 195 30.3
MELO3C014257.2 Cucumis melo HOM05D004499 ORTHO05D004928 3.0e-06 57.0 286 27.6
AL4G33450 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 5.2e-06 56.2 229 29.3
Dinv35728 Davidia involucrata HOM05D004499 ORTHO05D004928 6.7e-06 55.8 162 31.5


User provided reference genes

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