Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62040028 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.1e-106 389.0 200 100.0
AUR62040143 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.8e-50 201.8 111 95.5
AUR62043585 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.8e-49 199.9 105 99.0
AUR62029242 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.1e-49 199.1 111 94.6
AUR62044732 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.1e-49 199.1 111 94.6
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.4e-49 198.4 111 93.7
AUR62014273 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.6e-48 196.8 111 93.7
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.0e-48 196.4 105 97.1
AUR62030655 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.0e-48 196.4 111 93.7
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.7e-48 196.1 111 93.7
AUR62026239 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.2e-45 187.2 111 89.2
AUR62027501 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.6e-45 186.8 111 88.3
AUR62044017 Chenopodium quinoa HOM05D004615 ORTHO05D000062 4.9e-42 175.3 100 91.0
AUR62007689 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.5e-40 168.7 101 87.1
AUR62031149 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.9e-36 154.5 103 78.6
AUR62015616 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.6e-19 99.8 103 52.4
AUR62043404 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.6e-19 99.8 96 54.2
AUR62041516 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.4e-19 99.0 96 52.1
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.2e-18 96.7 96 53.1
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.2e-18 96.7 103 51.5
AUR62036566 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.9e-18 96.3 94 52.1
AUR62034011 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.4e-18 95.1 103 51.5
AUR62020795 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-17 94.0 91 52.7
AUR62040424 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-17 94.0 96 51.0
AUR62042361 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.1e-16 90.1 96 53.1
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 2.7e-16 89.7 106 49.1
AUR62041916 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.5e-16 89.4 103 47.6
EL10Ac6g14405 Beta vulgaris HOM05D004615 ORTHO05D000385 7.8e-16 88.2 115 41.7
AUR62031864 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.8e-16 88.2 78 55.1
AUR62030190 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-15 87.4 91 49.5
EL10Ac7g17625 Beta vulgaris HOM05D004615 ORTHO05D000385 1.7e-15 87.0 100 43.0
EL10Ac8g20398 Beta vulgaris HOM05D000137 ORTHO05D000385 1.7e-15 87.0 100 43.0
EL10Ac9g22619 Beta vulgaris HOM05D004615 ORTHO05D000385 1.7e-15 87.0 100 43.0
AUR62040771 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.3e-15 86.7 91 46.2
EL10Ac1g02164 Beta vulgaris HOM05D004615 ORTHO05D000385 3.0e-15 86.3 100 43.0
AUR62029526 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.6e-15 85.1 90 53.3
AUR62042035 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.1e-14 84.3 99 51.5
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 1.5e-14 84.0 112 39.3
EL10Ac4g08554 Beta vulgaris HOM05D004615 ORTHO05D000385 1.5e-14 84.0 94 42.6
AUR62031856 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.9e-14 83.6 84 50.0
AUR62043459 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.9e-14 83.6 84 50.0
AUR62043465 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.9e-14 83.6 84 50.0
EL10Ac8g19486 Beta vulgaris HOM05D004615 ORTHO05D000385 4.3e-14 82.4 94 42.6
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 9.5e-14 81.3 105 41.0
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 1.6e-13 80.5 105 40.0
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 1.6e-13 80.5 102 40.2
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 2.8e-13 79.7 105 40.0
EL10Ac7g17419 Beta vulgaris HOM05D004615 ORTHO05D000385 2.8e-13 79.7 105 39.0
EL10As6g23645 Beta vulgaris HOM05D004615 ORTHO05D000385 1.1e-12 77.8 105 39.0
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 1.4e-12 77.4 102 39.2
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 2.4e-12 76.6 105 39.0
EL10Ac7g17658 Beta vulgaris HOM05D004615 ORTHO05D000385 8.9e-12 74.7 105 38.1
AUR62042552 Chenopodium quinoa HOM05D004615 ORTHO05D000004 1.4e-09 67.4 67 50.7
EL10Ac3g05071 Beta vulgaris HOM05D001579 ORTHO05D003470 1.9e-09 67.0 44 75.0
Ah.02g117280 Amaranthus hybridus HOM05D001579 ORTHO05D003470 2.4e-09 66.6 31 93.5
AUR62034190 Chenopodium quinoa HOM05D001579 ORTHO05D003470 4.1e-09 65.9 52 61.5
AUR62036521 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.4e-09 65.5 61 54.1
Ah.12g056180 Amaranthus hybridus HOM05D001579 ORTHO05D003470 9.2e-09 64.7 31 90.3
AUR62034498 Chenopodium quinoa HOM05D001579 ORTHO05D003470 9.2e-09 64.7 47 63.8
AUR62033503 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.6e-08 63.9 61 52.5
AUR62003165 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.7e-08 63.2 31 87.1
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.7e-08 63.2 30 90.0
AUR62007688 Chenopodium quinoa HOM05D015894 ORTHO05D138324 6.0e-08 62.0 131 39.7
EL10Ac2g02989 Beta vulgaris HOM05D004615 ORTHO05D000385 7.8e-08 61.6 67 41.8
Hund14641 Selenicereus undatus HOM05D001579 ORTHO05D003470 7.8e-08 61.6 51 56.9
AUR62012549 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.0e-07 61.2 86 44.2
arahy.Tifrunner.gnm1.ann1.D5Q7RU Arachis hypogaea HOM05D001579 ORTHO05D003470 1.3e-07 60.8 33 75.8
CAN.G1412.7 Capsicum annuum HOM05D001579 ORTHO05D003470 1.7e-07 60.5 30 83.3
Cfa005003 Carpinus fangiana HOM05D001579 ORTHO05D003470 1.7e-07 60.5 43 62.8
CiPaw.05G064600 Carya illinoinensis HOM05D001579 ORTHO05D003470 1.7e-07 60.5 40 67.5
Ca_01102_v3 Cicer arietinum L. HOM05D001579 ORTHO05D003470 1.7e-07 60.5 33 75.8
Lalb_Chr01g0002541 Lupinus albus HOM05D001579 ORTHO05D003470 1.7e-07 60.5 33 75.8
Hund11566 Selenicereus undatus HOM05D001579 ORTHO05D003470 1.7e-07 60.5 30 86.7
Haze_02385 Corylus avellana HOM05D001579 ORTHO05D003470 2.3e-07 60.1 43 62.8
Lalb_Chr03g0025691 Lupinus albus HOM05D001579 ORTHO05D003470 2.3e-07 60.1 33 75.8
Rhsim11G0177200 Rhododendron simsii HOM05D001579 ORTHO05D003470 2.3e-07 60.1 32 78.1
Atru.chr5.3017 Acer truncatum HOM05D001579 ORTHO05D003470 3.0e-07 59.7 43 67.4
AUR62042133 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.0e-07 59.7 60 46.7
Ciclev10028310m.g Citrus clementina HOM05D001579 ORTHO05D003470 3.0e-07 59.7 43 67.4
DCAR_006199 Daucus carota HOM05D001579 ORTHO05D003470 3.0e-07 59.7 28 85.7
Lj3g0013700 Lotus japonicus HOM05D001579 ORTHO05D003470 3.0e-07 59.7 33 75.8
Nn1g01939 Nelumbo nucifera HOM05D001579 ORTHO05D003470 3.0e-07 59.7 51 54.9
TAR376G1017 Trochodendron aralioides HOM05D001579 ORTHO05D003470 3.0e-07 59.7 51 54.9
TAR628G1064 Trochodendron aralioides HOM05D001579 ORTHO05D003470 3.0e-07 59.7 51 54.9
CANSAT80G0427 Cannabis sativa HOM05D001579 ORTHO05D003470 3.9e-07 59.3 30 80.0
Cc02_g25820 Coffea canephora HOM05D001579 ORTHO05D003470 3.9e-07 59.3 30 83.3
Solyc02g090860.3 Solanum lycopersicum HOM05D001579 ORTHO05D003470 3.9e-07 59.3 51 52.9
Solyc10g007060.4 Solanum lycopersicum HOM05D001579 ORTHO05D003470 3.9e-07 59.3 51 52.9
Sopen02g035480 Solanum pennellii HOM05D001579 ORTHO05D003470 3.9e-07 59.3 51 52.9
Sopen10g002960 Solanum pennellii HOM05D001579 ORTHO05D003470 3.9e-07 59.3 51 52.9
PGSC0003DMG400004021 Solanum tuberosum HOM05D001579 ORTHO05D003470 3.9e-07 59.3 51 52.9
HanXRQChr14g0446281 Helianthus annuus HOM05D001579 ORTHO05D003470 5.1e-07 58.9 52 50.0
Actinidia00524 Actinidia chinensis HOM05D001579 ORTHO05D003470 6.6e-07 58.5 137 34.3
AUR62020674 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.6e-07 58.5 74 43.2
MD05G1066200 Malus domestica HOM05D001579 ORTHO05D003470 6.6e-07 58.5 30 80.0
MD10G1076200 Malus domestica HOM05D001579 ORTHO05D003470 6.6e-07 58.5 30 80.0
Prupe.8G096800 Prunus persica HOM05D001579 ORTHO05D003470 6.6e-07 58.5 30 80.0
Sc13g0008990 Simmondsia chinensis HOM05D001579 ORTHO05D003470 6.6e-07 58.5 51 52.9
PGSC0003DMG400025010 Solanum tuberosum HOM05D001579 ORTHO05D003470 6.6e-07 58.5 51 51.0
THA.LOC104824827 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 6.6e-07 58.5 43 65.1
Actinidia27894 Actinidia chinensis HOM05D001579 ORTHO05D003470 8.7e-07 58.2 51 51.0
Glyma.11G117800 Glycine max HOM05D001579 ORTHO05D003470 8.7e-07 58.2 33 72.7
Lj1g0020223 Lotus japonicus HOM05D001579 ORTHO05D003470 8.7e-07 58.2 33 72.7
Nitab4.5_0000974g0080 Nicotiana tabacum HOM05D001579 ORTHO05D003470 8.7e-07 58.2 30 80.0
Nitab4.5_0011688g0020 Nicotiana tabacum HOM05D001579 ORTHO05D003470 8.7e-07 58.2 30 80.0
Peaxi162Scf00016g00732 Petunia axillaris HOM05D001579 ORTHO05D003470 8.7e-07 58.2 30 80.0
THA.LOC104804143 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 8.7e-07 58.2 43 65.1
CAN.G1298.23 Capsicum annuum HOM05D001579 ORTHO05D003470 1.1e-06 57.8 30 80.0
Glyma.17G231300 Glycine max HOM05D001579 ORTHO05D003470 1.1e-06 57.8 33 72.7
Phvul.011G045200 Phaseolus vulgaris HOM05D001579 ORTHO05D003470 1.1e-06 57.8 33 72.7
PGR042G0613 Punica granatum HOM05D001579 ORTHO05D003470 1.1e-06 57.8 51 52.9
VMungo1127G1806 Vigna mungo HOM05D001579 ORTHO05D003470 1.1e-06 57.8 33 72.7
Actinidia08226 Actinidia chinensis HOM05D001579 ORTHO05D030913 1.5e-06 57.4 30 76.7
Cpa.g.sc62.152 Carica papaya HOM05D001579 ORTHO05D003470 1.5e-06 57.4 43 65.1
Lj2C359T3 Lonicera japonica HOM05D001579 ORTHO05D003470 1.5e-06 57.4 40 65.0
Lj7A248G13 Lonicera japonica HOM05D001579 ORTHO05D003470 1.5e-06 57.4 30 80.0
Lj7A253G28 Lonicera japonica HOM05D001579 ORTHO05D003470 1.5e-06 57.4 30 80.0
TPR.G19411 Trifolium pratense HOM05D001579 ORTHO05D003470 1.5e-06 57.4 31 77.4
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.9e-06 57.0 46 63.0
Glyma.12G043200 Glycine max HOM05D001579 ORTHO05D003470 1.9e-06 57.0 33 72.7
Nitab4.5_0004172g0030 Nicotiana tabacum HOM05D001579 ORTHO05D003470 1.9e-06 57.0 38 65.8
Aqoxy7G01384 Aquilegia oxysepala HOM05D001579 ORTHO05D003470 2.5e-06 56.6 53 50.9
AUR62035731 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.5e-06 56.6 61 47.5
Duzib248G0143 Durio zibethinus HOM05D001579 ORTHO05D003470 2.5e-06 56.6 32 75.0
Hma1.2p1_0633F.1_g192550 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 2.5e-06 56.6 30 80.0
Hma1.2p1_1375F.1_g279070 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 2.5e-06 56.6 30 80.0
Hma1.2p1_3239F.1_g334310 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 2.5e-06 56.6 30 80.0
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 3.3e-06 56.2 59 45.8
FvH4_3g28200 Fragaria vesca HOM05D001579 ORTHO05D003470 3.3e-06 56.2 51 56.9
FAN11G3917 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.3e-06 56.2 51 56.9
FAN16G0460 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.3e-06 56.2 51 56.9
FAN21G0623 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.3e-06 56.2 51 56.9
HanXRQChr14g0437911 Helianthus annuus HOM05D001579 ORTHO05D003470 3.3e-06 56.2 52 50.0
Psat7g141360 Pisum sativum HOM05D001579 ORTHO05D003470 3.3e-06 56.2 33 69.7
Sed0021732 Sechium edule HOM05D001579 ORTHO05D003470 3.3e-06 56.2 30 80.0
CSS0013099 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 4.3e-06 55.8 51 49.0
CSS0031219 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 4.3e-06 55.8 51 49.0
CSS0049673 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 4.3e-06 55.8 51 49.0
Medtr4g070040 Medicago truncatula HOM05D001579 ORTHO05D003470 4.3e-06 55.8 33 69.7
vmacro11113 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 4.3e-06 55.8 28 78.6
AL7G11270 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 5.6e-06 55.5 41 65.9
CSS0030391 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D030913 5.6e-06 55.5 48 54.2
AUR62044016 Chenopodium quinoa HOM05D001579 ORTHO05D137678 5.6e-06 55.5 69 55.1
FAN16G2055 Fragaria x ananassa HOM05D001579 ORTHO05D003470 5.6e-06 55.5 67 41.8
BcaC07g41119 Brassica carinata HOM05D001579 ORTHO05D003470 7.3e-06 55.1 41 65.9
C08p41200 Brassica napus HOM05D001579 ORTHO05D003470 7.3e-06 55.1 41 65.9
BolC8t51687H Brassica oleracea HOM05D001579 ORTHO05D003470 7.3e-06 55.1 41 65.9
Carub.0007s0120 Capsella rubella HOM05D001579 ORTHO05D003470 7.3e-06 55.1 41 65.9
CARHR247410 Cardamine hirsuta HOM05D001579 ORTHO05D003470 7.3e-06 55.1 41 65.9
ECA240G1027 Erigeron canadensis HOM05D001579 ORTHO05D003470 7.3e-06 55.1 31 74.2
Sp4g00870 Schrenkiella parvula HOM05D001579 ORTHO05D003470 7.3e-06 55.1 41 65.9
GSVIVG01031967001 Vitis vinifera HOM05D001579 ORTHO05D003470 7.3e-06 55.1 51 51.0
AT4G39280 Arabidopsis thaliana HOM05D001579 ORTHO05D003470 9.6e-06 54.7 41 63.4
Duzib132G0542 Durio zibethinus HOM05D001579 ORTHO05D003470 9.6e-06 54.7 30 76.7
Eucgr.D00245 Eucalyptus grandis HOM05D001579 ORTHO05D003470 9.6e-06 54.7 30 73.3
Gohir.A04G130900 Gossypium hirsutum HOM05D001579 ORTHO05D003470 9.6e-06 54.7 30 76.7
Gohir.D04G167200 Gossypium hirsutum HOM05D001579 ORTHO05D003470 9.6e-06 54.7 30 76.7
Gorai.012G155500 Gossypium raimondii HOM05D001579 ORTHO05D003470 9.6e-06 54.7 30 76.7
Potri.009G116100 Populus trichocarpa HOM05D001579 ORTHO05D003470 9.6e-06 54.7 45 62.2
Thecc.02G085100 Theobroma cacao HOM05D001579 ORTHO05D003470 9.6e-06 54.7 30 76.7


User provided reference genes

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