Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039933 Chenopodium quinoa HOM05D005270 ORTHO05D006239 1.2e-55 219.5 110 100.0
AUR62007475 Chenopodium quinoa HOM05D005270 ORTHO05D006239 1.4e-54 216.1 110 98.2
EL10Ac5g13010 Beta vulgaris HOM05D005270 ORTHO05D006239 1.7e-52 209.1 110 94.5
Sc01g0009340 Simmondsia chinensis HOM05D005270 ORTHO05D006239 1.6e-47 192.6 110 84.5
PGR031G3926 Punica granatum HOM05D005270 ORTHO05D006239 2.8e-47 191.8 110 83.6
Eucgr.D02030 Eucalyptus grandis HOM05D005270 ORTHO05D006239 6.1e-47 190.7 110 84.5
Prupe.5G075500 Prunus persica HOM05D005270 ORTHO05D006239 8.0e-47 190.3 110 84.5
QL12p013868 Quercus lobata HOM05D005270 ORTHO05D006239 1.4e-46 189.5 109 83.5
Actinidia05188 Actinidia chinensis HOM05D005270 ORTHO05D006239 1.8e-46 189.1 110 82.7
CiPaw.11G150400 Carya illinoinensis HOM05D005270 ORTHO05D006239 1.8e-46 189.1 110 82.7
GSVIVG01001274001 Vitis vinifera HOM05D005270 ORTHO05D006239 2.3e-46 188.7 110 83.6
GSVIVG01004774001 Vitis vinifera HOM05D005270 ORTHO05D006239 2.3e-46 188.7 110 83.6
MD06G1067000 Malus domestica HOM05D005270 ORTHO05D006239 3.0e-46 188.3 110 80.9
Potri.001G120400 Populus trichocarpa HOM05D005270 ORTHO05D006239 3.0e-46 188.3 110 82.7
Ca_25339_v3 Cicer arietinum L. HOM05D005270 ORTHO05D006239 4.0e-46 188.0 110 82.7
Manes.01G076600 Manihot esculenta HOM05D005270 ORTHO05D006239 4.0e-46 188.0 110 83.6
Actinidia27450 Actinidia chinensis HOM05D005270 ORTHO05D006239 5.2e-46 187.6 110 81.8
TPR.G37612 Trifolium pratense HOM05D005270 ORTHO05D006239 5.2e-46 187.6 110 81.8
Psat4g070360 Pisum sativum HOM05D005270 ORTHO05D006239 8.9e-46 186.8 110 80.9
Dinv21601 Davidia involucrata HOM05D005270 ORTHO05D006239 1.2e-45 186.4 110 80.9
Atru.chr9.1379_Atru.chr9.1380 Acer truncatum HOM05D005270 ORTHO05D006239 1.5e-45 186.0 110 81.8
Atru.chr9.1383 Acer truncatum HOM05D005270 ORTHO05D006239 1.5e-45 186.0 110 81.8
Lalb_Chr05g0225581 Lupinus albus HOM05D005270 ORTHO05D006239 1.5e-45 186.0 110 81.8
Duzib205G1833 Durio zibethinus HOM05D005270 ORTHO05D006239 2.6e-45 185.3 110 81.8
FvH4_5g00280 Fragaria vesca HOM05D005270 ORTHO05D006239 2.6e-45 185.3 110 79.1
FAN08G1405 Fragaria x ananassa HOM05D005270 ORTHO05D006239 2.6e-45 185.3 110 79.1
Phvul.003G218000 Phaseolus vulgaris HOM05D005270 ORTHO05D006239 2.6e-45 185.3 110 80.9
RcHm_v2.0_Chr7g0202331 Rosa chinensis HOM05D005270 ORTHO05D006239 2.6e-45 185.3 110 80.0
Gohir.A03G010000 Gossypium hirsutum HOM05D005270 ORTHO05D006239 3.4e-45 184.9 110 82.7
Sabra01G0092800 Salix brachista HOM05D005270 ORTHO05D006239 3.4e-45 184.9 110 81.8
Migut.E01048 Erythranthe guttata HOM05D005270 ORTHO05D006239 4.4e-45 184.5 110 79.1
arahy.Tifrunner.gnm1.ann1.9F7ELE Arachis hypogaea HOM05D005270 ORTHO05D006239 5.8e-45 184.1 110 80.9
Ciclev10020501m.g Citrus clementina HOM05D005270 ORTHO05D006239 5.8e-45 184.1 110 82.7
Glyma.05G056400 Glycine max HOM05D005270 ORTHO05D006239 5.8e-45 184.1 110 80.9
Hma1.2p1_1414F.1_g281890 Hydrangea macrophylla HOM05D005270 ORTHO05D006239 5.8e-45 184.1 110 79.1
CANSAT21G2027 Cannabis sativa HOM05D005270 ORTHO05D006239 9.8e-45 183.3 110 80.9
Gorai.N027100 Gossypium raimondii HOM05D005270 ORTHO05D006239 1.3e-44 183.0 110 81.8
FAN18G1040 Fragaria x ananassa HOM05D005270 ORTHO05D006239 1.7e-44 182.6 110 78.2
Gohir.D03G160700 Gossypium hirsutum HOM05D005270 ORTHO05D006239 1.7e-44 182.6 110 81.8
PGSC0003DMG400004791 Solanum tuberosum HOM05D005270 ORTHO05D006239 2.2e-44 182.2 110 79.1
arahy.Tifrunner.gnm1.ann1.VW53Z5 Arachis hypogaea HOM05D005270 ORTHO05D006239 2.9e-44 181.8 110 80.0
COL.COLO4_37215 Corchorus olitorius HOM05D005270 ORTHO05D006239 2.9e-44 181.8 110 80.9
FAN13G2928 Fragaria x ananassa HOM05D005270 ORTHO05D006239 2.9e-44 181.8 110 77.3
Gohir.A09G195500 Gossypium hirsutum HOM05D005270 ORTHO05D006239 2.9e-44 181.8 110 79.1
Rhsim07G0104300 Rhododendron simsii HOM05D005270 ORTHO05D006239 2.9e-44 181.8 110 79.1
Medtr4g101620 Medicago truncatula HOM05D005270 ORTHO05D006239 3.7e-44 181.4 110 80.9
TWI81G0718 Tripterygium wilfordii HOM05D005270 ORTHO05D006239 3.7e-44 181.4 110 80.0
CSS0023019 Camellia sinensis var. sinensis HOM05D005270 ORTHO05D006239 4.9e-44 181.0 110 80.0
CSS0046114 Camellia sinensis var. sinensis HOM05D005270 ORTHO05D006239 4.9e-44 181.0 110 80.0
Duzib068G0557 Durio zibethinus HOM05D005270 ORTHO05D006239 6.4e-44 180.6 110 80.9
Gohir.D09G190100 Gossypium hirsutum HOM05D005270 ORTHO05D006239 8.3e-44 180.3 110 77.3
Gorai.006G212700 Gossypium raimondii HOM05D005270 ORTHO05D006239 8.3e-44 180.3 110 77.3
Oeu038010.1 Olea europaea HOM05D005270 ORTHO05D006239 8.3e-44 180.3 110 77.3
Thecc.03G257000 Theobroma cacao HOM05D005270 ORTHO05D006239 1.1e-43 179.9 110 80.0
Solyc08g079070.2 Solanum lycopersicum HOM05D005270 ORTHO05D006239 1.4e-43 179.5 110 78.2
TAR629G2769 Trochodendron aralioides HOM05D005270 ORTHO05D006239 1.4e-43 179.5 110 80.9
FAN04G3018 Fragaria x ananassa HOM05D005270 ORTHO05D006239 1.8e-43 179.1 115 75.7
Glyma.17G138600 Glycine max HOM05D005270 ORTHO05D006239 1.8e-43 179.1 110 80.9
Sopen08g027530 Solanum pennellii HOM05D005270 ORTHO05D006239 1.8e-43 179.1 110 78.2
SGA_v2.0_scaffold144G35994 Striga asiatica HOM05D005270 ORTHO05D003965 1.8e-43 179.1 108 78.7
Cc08_g12920 Coffea canephora HOM05D005270 ORTHO05D006239 2.4e-43 178.7 110 75.5
SalBow1G0839 Salvia bowleyana HOM05D005270 ORTHO05D006239 2.4e-43 178.7 110 76.4
vmacro14106 Vaccinium macrocarpon HOM05D005270 ORTHO05D006239 3.2e-43 178.3 110 76.4
Peaxi162Scf00002g00815 Petunia axillaris HOM05D005270 ORTHO05D006239 5.4e-43 177.6 110 76.4
VMungo0251G3554 Vigna mungo HOM05D005270 ORTHO05D006239 7.0e-43 177.2 110 77.3
MSTRG.25537 Avicennia marina HOM05D005270 ORTHO05D006239 9.2e-43 176.8 110 75.5
CAN.G1217.18 Capsicum annuum HOM05D000486 ORTHO05D000375 1.2e-42 176.4 108 77.8
ClCG01G003850 Citrullus lanatus HOM05D005270 ORTHO05D006239 1.2e-42 176.4 110 76.4
ATR1152G004 Amborella trichopoda HOM05D005270 ORTHO05D006239 2.0e-42 175.6 110 75.5
Lj4g0020394 Lotus japonicus HOM05D005270 ORTHO05D006239 2.0e-42 175.6 110 77.3
Sed0019529 Sechium edule HOM05D005270 ORTHO05D006239 2.7e-42 175.3 108 75.9
Aa31LG1G2400 Aethionema arabicum HOM05D005270 ORTHO05D006239 3.5e-42 174.9 110 74.5
BraA06t24120Z Brassica rapa HOM05D005270 ORTHO05D006239 6.0e-42 174.1 111 76.6
MELO3C005559.2 Cucumis melo HOM05D005270 ORTHO05D006239 6.0e-42 174.1 110 75.5
CsaV3_5G003980 Cucumis sativus L. HOM05D005270 ORTHO05D006239 6.0e-42 174.1 110 75.5
A06p09330 Brassica napus HOM05D005270 ORTHO05D006239 7.8e-42 173.7 111 75.7
THA.LOC104809459 Tarenaya hassleriana HOM05D005270 ORTHO05D006239 7.8e-42 173.7 110 75.5
Sp1g10840 Schrenkiella parvula HOM05D005270 ORTHO05D006239 1.0e-41 173.3 111 76.6
Carub.0001s1190 Capsella rubella HOM05D005270 ORTHO05D006239 1.3e-41 172.9 111 75.7
Thhalv10007790m.g Eutrema salsugineum HOM05D005270 ORTHO05D006239 1.3e-41 172.9 111 75.7
C05p11010 Brassica napus HOM05D005270 ORTHO05D006239 1.7e-41 172.6 111 74.8
CARHR012530 Cardamine hirsuta HOM05D005270 ORTHO05D006239 1.7e-41 172.6 111 74.8
Lj2A211T58 Lonicera japonica HOM05D005270 ORTHO05D006239 2.3e-41 172.2 110 73.6
HPP92_022434 Vanilla planifolia HOM05D005270 ORTHO05D006239 2.3e-41 172.2 110 72.7
AT1G12230 Arabidopsis thaliana HOM05D005270 ORTHO05D006239 3.0e-41 171.8 111 74.8
DCAR_006814 Daucus carota HOM05D005270 ORTHO05D006239 3.0e-41 171.8 110 74.5
unitig_0.g1234 Utricularia gibba HOM05D005270 ORTHO05D006239 3.9e-41 171.4 110 70.9
BolC5t29844H Brassica oleracea HOM05D005270 ORTHO05D006239 5.0e-41 171.0 111 73.9
HanXRQChr03g0087851 Helianthus annuus HOM05D005270 ORTHO05D006239 6.6e-41 170.6 110 71.8
AL1G23510 Arabidopsis lyrata HOM05D005270 ORTHO05D006239 8.6e-41 170.2 111 73.9
ECA240G0014 Erigeron canadensis HOM05D000201 ORTHO05D006239 1.1e-40 169.9 109 69.7
MBI04_g37584_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D006239 1.1e-40 169.9 110 76.4
PSO017G6911 Papaver somniferum HOM05D005270 ORTHO05D006239 2.5e-40 168.7 110 75.5
PSO170G6680 Papaver somniferum HOM05D005270 ORTHO05D006239 4.3e-40 167.9 110 76.4
Zm00001eb172680 Zea mays HOM05D005270 ORTHO05D006239 7.3e-40 167.2 110 70.0
CDE12G0422 Ceratophyllum demersum HOM05D005270 ORTHO05D006239 9.5e-40 166.8 110 70.9
Lsat_1_v5_gn_6_90321 Lactuca sativa HOM05D005270 ORTHO05D006239 1.6e-39 166.0 110 71.8
Aqoxy7G00723 Aquilegia oxysepala HOM05D005270 ORTHO05D006239 1.1e-38 163.3 110 71.8
SEGI_03700 Sequoiadendron giganteum HOM05D005270 ORTHO05D006239 6.8e-38 160.6 110 70.0
Dinv39103 Davidia involucrata HOM05D000201 ORTHO05D001515 8.9e-38 160.2 99 77.8
AagrBONN_evm.TU.Sc2ySwM_369.586 Anthoceros agrestis HOM05D005270 ORTHO05D006239 5.4e-35 151.0 110 64.5
Pp3c15_6350 Physcomitrium patens HOM05D005270 ORTHO05D006239 1.1e-32 143.3 110 62.7
BcaC05g25195 Brassica carinata HOM05D005270 ORTHO05D006239 1.9e-32 142.5 95 70.5
Cpa.g.sc29.127 Carica papaya HOM05D005270 ORTHO05D006239 4.7e-31 137.9 209 42.6
DCAR_004923 Daucus carota HOM05D005270 ORTHO05D006239 2.6e-29 132.1 110 60.0
Nitab4.5_0009175g0010 Nicotiana tabacum HOM05D005270 ORTHO05D006239 1.3e-28 129.8 120 58.3
Mapoly0029s0029 Marchantia polymorpha HOM05D005270 ORTHO05D006239 6.0e-26 120.9 114 55.3
Nitab4.5_0000993g0070 Nicotiana tabacum HOM05D005270 ORTHO05D006239 1.5e-24 116.3 110 56.4
CBR_g37411 Chara braunii HOM05D005270 ORTHO05D006239 2.8e-23 112.1 110 50.9
CDE04G2727 Ceratophyllum demersum HOM05D005270 ORTHO05D006239 2.0e-21 105.9 110 52.7
SalBow1G5553 Salvia bowleyana HOM05D005270 ORTHO05D006239 2.7e-18 95.5 62 71.0
Haze_07851 Corylus avellana HOM05D005270 ORTHO05D006239 6.6e-17 90.9 49 85.7
SalBow1G3426 Salvia bowleyana HOM05D005270 ORTHO05D006239 6.9e-14 80.9 51 66.7
BcaC07g41719 Brassica carinata HOM05D005270 ORTHO05D039702 2.4e-06 55.8 65 55.4
BolC8t52299H Brassica oleracea HOM05D005270 ORTHO05D039702 2.4e-06 55.8 65 55.4


User provided reference genes

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