Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 3.4e-112 408.3 198 100.0
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 1.3e-82 310.1 187 80.2
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 1.9e-62 243.0 186 67.2
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 1.1e-59 233.8 151 71.5
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 4.3e-59 231.9 152 70.4
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 4.3e-59 231.9 152 71.1
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 9.6e-59 230.7 151 70.2
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 1.6e-58 229.9 186 61.3
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 2.8e-58 229.2 151 72.2
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 4.8e-58 228.4 152 70.4
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 6.3e-58 228.0 151 68.9
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 6.3e-58 228.0 152 71.1
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 8.2e-58 227.6 151 70.2
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 8.2e-58 227.6 185 57.3
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 3.1e-57 225.7 168 64.9
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 3.1e-57 225.7 152 66.4
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 4.1e-57 225.3 191 57.6
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 5.3e-57 224.9 152 68.4
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 6.9e-57 224.6 152 68.4
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 6.9e-57 224.6 152 69.7
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 6.9e-57 224.6 152 69.1
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 9.0e-57 224.2 185 58.4
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 1.5e-56 223.4 152 68.4
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 2.0e-56 223.0 152 67.8
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 2.6e-56 222.6 151 66.9
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 7.6e-56 221.1 152 67.1
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 7.6e-56 221.1 186 56.5
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 1.0e-55 220.7 152 65.1
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 1.3e-55 220.3 152 67.1
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 1.3e-55 220.3 152 62.5
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 2.2e-55 219.5 154 66.9
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 2.2e-55 219.5 154 66.9
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 2.9e-55 219.2 151 68.9
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 2.9e-55 219.2 152 65.8
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 2.9e-55 219.2 153 68.0
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 5.0e-55 218.4 152 66.4
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 5.0e-55 218.4 152 69.1
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 5.0e-55 218.4 151 66.9
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 6.5e-55 218.0 152 67.8
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 6.5e-55 218.0 152 65.8
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 6.5e-55 218.0 152 64.5
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 8.4e-55 217.6 152 65.1
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 1.1e-54 217.2 152 65.8
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 1.4e-54 216.9 152 65.1
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 1.4e-54 216.9 152 65.8
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 1.4e-54 216.9 153 67.3
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 1.4e-54 216.9 152 66.4
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 1.9e-54 216.5 154 68.8
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 1.9e-54 216.5 152 66.4
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 2.5e-54 216.1 197 52.8
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 3.2e-54 215.7 188 59.0
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 3.2e-54 215.7 152 65.8
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 3.2e-54 215.7 152 63.2
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 3.2e-54 215.7 152 66.4
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 3.2e-54 215.7 153 64.7
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 4.2e-54 215.3 152 64.5
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 4.2e-54 215.3 152 65.1
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 4.2e-54 215.3 166 60.8
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 4.2e-54 215.3 152 65.1
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 4.2e-54 215.3 151 66.2
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 5.5e-54 214.9 152 65.1
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 7.2e-54 214.5 152 65.8
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 7.2e-54 214.5 152 65.8
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 7.2e-54 214.5 152 65.1
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 9.3e-54 214.2 151 64.9
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 9.3e-54 214.2 152 64.5
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 1.2e-53 213.8 152 64.5
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 1.6e-53 213.4 152 65.1
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 1.6e-53 213.4 152 65.1
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 2.1e-53 213.0 152 64.5
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 2.1e-53 213.0 152 65.1
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 3.5e-53 212.2 152 64.5
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 4.6e-53 211.8 202 53.5
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 6.1e-53 211.5 153 64.1
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 6.1e-53 211.5 152 66.4
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 6.1e-53 211.5 152 65.1
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 1.8e-52 209.9 159 62.3
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 1.8e-52 209.9 152 66.4
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 3.9e-52 208.8 172 59.9
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 8.7e-52 207.6 152 63.8
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 1.1e-51 207.2 187 56.1
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 3.3e-51 205.7 136 66.9
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 4.3e-51 205.3 154 62.3
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 5.7e-51 204.9 152 61.8
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 1.6e-50 203.4 185 53.5
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 2.8e-50 202.6 153 64.1
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 6.3e-50 201.4 152 57.9
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 8.2e-50 201.1 151 60.9
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 1.1e-49 200.7 152 58.6
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 1.4e-49 200.3 137 66.4
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 1.8e-49 199.9 152 57.9
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 2.4e-49 199.5 152 62.5
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 5.3e-49 198.4 203 48.8
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 6.9e-49 198.0 216 47.7
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 2.0e-48 196.4 160 61.2
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 2.2e-47 193.0 160 58.1
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 3.8e-47 192.2 152 56.6
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 8.5e-47 191.0 152 55.9
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 5.5e-46 188.3 152 56.6
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 1.0e-44 184.1 118 72.0
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 1.7e-42 176.8 201 50.2
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 4.1e-41 172.2 118 67.8
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 3.2e-30 136.0 162 40.7
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 2.8e-26 122.9 166 41.6
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 1.3e-18 97.4 160 35.0
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 2.8e-18 96.3 160 34.4
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 6.3e-18 95.1 162 32.7
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 1.4e-17 94.0 69 60.9
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 2.7e-16 89.7 155 34.2
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 3.2e-14 82.8 159 33.3
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 3.1e-09 66.2 47 57.4
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 1.7e-07 60.5 43 62.8
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 5.6e-06 55.5 51 43.1


User provided reference genes

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