Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039881 Chenopodium quinoa HOM05D004355 ORTHO05D005228 5.0e-252 874.0 455 100.0
Ah.08g211740 Amaranthus hybridus HOM05D004355 ORTHO05D005228 1.7e-188 662.9 448 77.2
EL10Ac7g16576 Beta vulgaris HOM05D004355 ORTHO05D005228 2.0e-176 622.9 464 74.4
AUR62040465 Chenopodium quinoa HOM05D004355 ORTHO05D005228 5.9e-160 568.2 304 95.7
Sc02g0001740 Simmondsia chinensis HOM05D004355 ORTHO05D005228 5.5e-158 561.6 455 66.8
CANSAT80G0576 Cannabis sativa HOM05D004355 ORTHO05D005228 1.5e-147 526.9 463 61.3
Atru.chr8.1850 Acer truncatum HOM05D004355 ORTHO05D005228 2.6e-147 526.2 465 60.4
Lj1g0007988 Lotus japonicus HOM05D004355 ORTHO05D005228 7.7e-144 514.6 457 60.8
TWI77G0715 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 7.7e-144 514.6 474 58.9
Haze_20575 Corylus avellana HOM05D004355 ORTHO05D005228 3.2e-142 509.2 473 59.8
Glyma.03G182000 Glycine max HOM05D004355 ORTHO05D005228 8.0e-141 504.6 468 59.2
Cfa017577 Carpinus fangiana HOM05D004355 ORTHO05D005228 1.4e-140 503.8 475 58.3
TWI74G0762 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 1.4e-140 503.8 481 57.6
Manes.08G008600 Manihot esculenta HOM05D004355 ORTHO05D005228 3.0e-140 502.7 466 58.2
Phvul.001G178100 Phaseolus vulgaris HOM05D004355 ORTHO05D005228 3.9e-140 502.3 472 58.7
VMungo1383G3555 Vigna mungo HOM05D004355 ORTHO05D005228 5.2e-140 501.9 469 58.8
CiPaw.10G132700 Carya illinoinensis HOM05D004355 ORTHO05D005228 8.8e-140 501.1 458 59.2
TAR633G2000 Trochodendron aralioides HOM05D004355 ORTHO05D005228 8.8e-140 501.1 466 58.4
Lalb_Chr01g0018741 Lupinus albus HOM05D004355 ORTHO05D005228 7.4e-139 498.0 471 57.1
MELO3C009345.2 Cucumis melo HOM05D004355 ORTHO05D005228 9.7e-139 497.7 464 58.2
Glyma.19G182500 Glycine max HOM05D004355 ORTHO05D005228 9.7e-139 497.7 463 58.3
CsaV3_3G035850 Cucumis sativus L. HOM05D004355 ORTHO05D005228 2.2e-138 496.5 464 58.0
Manes.09G063900 Manihot esculenta HOM05D004355 ORTHO05D005228 2.8e-138 496.1 463 58.1
Dinv35767 Davidia involucrata HOM05D004355 ORTHO05D003235 1.8e-137 493.4 455 58.2
Sed0019590 Sechium edule HOM05D004355 ORTHO05D005228 3.1e-137 492.7 462 57.4
TAR636G0816 Trochodendron aralioides HOM05D004355 ORTHO05D005228 1.2e-136 490.7 458 58.3
QL07p044062 Quercus lobata HOM05D004355 ORTHO05D005228 2.2e-135 486.5 477 56.8
Potri.006G126600 Populus trichocarpa HOM05D004355 ORTHO05D005228 8.5e-135 484.6 460 58.3
MD04G1095900 Malus domestica HOM05D004355 ORTHO05D005228 3.2e-134 482.6 453 57.8
Prupe.6G235000 Prunus persica HOM05D004355 ORTHO05D005228 3.2e-134 482.6 453 60.0
Hma1.2p1_1099F.1_g256870 Hydrangea macrophylla HOM05D004355 ORTHO05D005228 6.1e-133 478.4 455 56.3
FvH4_6g16100 Fragaria vesca HOM05D004355 ORTHO05D005228 1.4e-132 477.2 450 58.9
Cpa.g.sc92.114 Carica papaya HOM05D004355 ORTHO05D005228 6.7e-132 474.9 475 55.6
ClCG10G020240 Citrullus lanatus HOM05D004355 ORTHO05D005228 1.2e-131 474.2 450 57.6
Sabra06G0099700 Salix brachista HOM05D004355 ORTHO05D005228 2.6e-131 473.0 463 57.0
TAR369G0267 Trochodendron aralioides HOM05D004355 ORTHO05D005228 2.8e-130 469.5 451 56.3
Lalb_Chr25g0289061 Lupinus albus HOM05D004355 ORTHO05D005228 8.2e-130 468.0 460 55.7
Potri.016G091400 Populus trichocarpa HOM05D004355 ORTHO05D005228 8.2e-130 468.0 458 57.2
FAN05G2251 Fragaria x ananassa HOM05D004355 ORTHO05D005228 2.4e-129 466.5 439 58.8
FAN02G3539 Fragaria x ananassa HOM05D004355 ORTHO05D005228 5.3e-129 465.3 448 57.4
Thecc.05G062900 Theobroma cacao HOM05D004355 ORTHO05D005228 3.5e-128 462.6 441 56.7
PGR004G0459 Punica granatum HOM05D004355 ORTHO05D005228 5.9e-128 461.8 464 55.2
CSS0012498 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 7.7e-128 461.5 463 55.1
Ciclev10011674m.g Citrus clementina HOM05D004355 ORTHO05D005228 1.3e-127 460.7 457 55.4
COL.COLO4_26990 Corchorus olitorius HOM05D004355 ORTHO05D005228 1.7e-127 460.3 441 56.2
Duzib106G0643 Durio zibethinus HOM05D004355 ORTHO05D005228 1.5e-126 457.2 439 54.9
Gohir.A09G148600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.5e-126 456.4 439 54.9
Gorai.006G165700 Gossypium raimondii HOM05D004355 ORTHO05D005228 1.6e-125 453.8 439 54.7
Gohir.D09G144400 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.7e-125 453.0 439 54.7
Duzib128G1889 Durio zibethinus HOM05D004355 ORTHO05D005228 3.6e-125 452.6 441 55.1
Duzib093G1016 Durio zibethinus HOM05D004355 ORTHO05D005228 8.0e-125 451.4 439 55.6
PSO339G4715 Papaver somniferum HOM05D004355 ORTHO05D005228 8.0e-125 451.4 470 53.8
Nn2g13729 Nelumbo nucifera HOM05D004355 ORTHO05D005228 4.0e-124 449.1 462 54.8
TPR.G9373 Trifolium pratense HOM05D004355 ORTHO05D005228 5.2e-124 448.7 483 51.3
Psat3g043400 Pisum sativum HOM05D004355 ORTHO05D005228 2.0e-123 446.8 466 52.6
Aa31LG5G22300 Aethionema arabicum HOM05D004355 ORTHO05D005228 3.4e-123 446.0 471 51.8
CSS0041806 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 3.4e-123 446.0 464 52.8
Ca_08851_v3 Cicer arietinum L. HOM05D004355 ORTHO05D005228 3.4e-123 446.0 470 52.1
CSS0033330 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 5.7e-123 445.3 466 52.6
CsaV3_6G039740 Cucumis sativus L. HOM05D004355 ORTHO05D005228 7.5e-123 444.9 458 53.7
MELO3C014220.2 Cucumis melo HOM05D004355 ORTHO05D005228 1.7e-122 443.7 458 53.9
THA.LOC104823460 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 1.7e-122 443.7 462 52.8
DCAR_009301 Daucus carota HOM05D004355 ORTHO05D005228 2.2e-122 443.4 458 53.1
AL4G33360 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 3.7e-122 442.6 458 53.1
ClCG04G009160 Citrullus lanatus HOM05D004355 ORTHO05D005228 4.8e-122 442.2 460 53.3
Gorai.009G416200 Gossypium raimondii HOM05D004355 ORTHO05D005228 1.8e-121 440.3 437 53.3
Gohir.A04G073200 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.4e-121 439.9 437 53.3
Nitab4.5_0002963g0100 Nicotiana tabacum HOM05D004355 ORTHO05D005228 3.1e-121 439.5 444 53.4
THA.LOC104806491 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 3.1e-121 439.5 462 54.1
Gohir.D04G112100 Gossypium hirsutum HOM05D004355 ORTHO05D005228 5.4e-121 438.7 437 53.1
Gohir.A01G139600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.0e-120 436.8 440 54.3
PGSC0003DMG400035240 Solanum tuberosum HOM05D004355 ORTHO05D005228 7.7e-120 434.9 452 52.2
Gohir.D01G128600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.1e-118 431.0 438 53.4
Medtr7g101730 Medicago truncatula HOM05D004355 ORTHO05D005228 2.1e-117 426.8 480 48.5
Sopen09g002770 Solanum pennellii HOM05D004355 ORTHO05D005228 1.2e-115 421.0 430 52.6
Solyc09g007950.3 Solanum lycopersicum HOM05D004355 ORTHO05D005228 2.6e-115 419.9 430 52.6
vmacro08776 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 9.8e-115 417.9 508 48.8
HanXRQChr11g0350251 Helianthus annuus HOM05D004355 ORTHO05D005228 6.3e-114 415.2 432 53.0
Aqoxy1G01202 Aquilegia oxysepala HOM05D004355 ORTHO05D005228 8.3e-114 414.8 457 51.9
Rhsim05G0179400 Rhododendron simsii HOM05D004355 ORTHO05D005228 7.0e-113 411.8 445 51.7
Cc06_g04030 Coffea canephora HOM05D004355 ORTHO05D005228 2.7e-112 409.8 458 47.6
A05p08800 Brassica napus HOM05D004355 ORTHO05D005228 6.6e-111 405.2 449 50.1
ECA248G2910 Erigeron canadensis HOM05D004355 ORTHO05D005228 8.6e-111 404.8 434 52.8
MSTRG.26701 Avicennia marina HOM05D004355 ORTHO05D005228 1.9e-110 403.7 457 50.5
BraA05t19847Z Brassica rapa HOM05D004355 ORTHO05D005228 2.5e-110 403.3 451 49.2
BolC4t22685H Brassica oleracea HOM05D004355 ORTHO05D005228 4.3e-110 402.5 458 48.9
Sp4g19340 Schrenkiella parvula HOM05D004355 ORTHO05D005228 4.3e-110 402.5 464 50.0
BcaC02g11829 Brassica carinata HOM05D004355 ORTHO05D005228 9.5e-110 401.4 458 48.7
SalBow5G3882 Salvia bowleyana HOM05D004355 ORTHO05D005228 1.6e-109 400.6 449 49.4
SalBow5G3919 Salvia bowleyana HOM05D004355 ORTHO05D005228 2.1e-109 400.2 449 49.4
C04p10920 Brassica napus HOM05D004355 ORTHO05D005228 4.7e-109 399.1 458 48.5
Migut.L01688 Erythranthe guttata HOM05D004355 ORTHO05D005228 5.2e-108 395.6 457 47.5
Nitab4.5_0000101g0300 Nicotiana tabacum HOM05D004355 ORTHO05D005228 1.2e-107 394.4 415 52.3
PGR004G2422 Punica granatum HOM05D004355 ORTHO05D005228 2.6e-107 393.3 450 50.7
vmacro20020 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 7.5e-107 391.7 466 49.4
Dinv37299 Davidia involucrata HOM05D004355 ORTHO05D005228 6.4e-106 388.7 270 69.3
Sabra16G0096600 Salix brachista HOM05D004355 ORTHO05D005228 1.1e-105 387.9 600 41.5
SGA_v2.0_scaffold75G24855 Striga asiatica HOM05D004355 ORTHO05D005228 3.9e-103 379.4 452 47.8
Gorai.002G162400 Gossypium raimondii HOM05D004355 ORTHO05D005228 6.6e-103 378.6 385 53.5
Rhsim04G0145100 Rhododendron simsii HOM05D004355 ORTHO05D005228 8.6e-103 378.3 572 42.5
AT2G37035 Arabidopsis thaliana HOM05D004355 ORTHO05D005228 1.1e-102 377.9 458 48.7
Actinidia19660 Actinidia chinensis HOM05D004355 ORTHO05D005228 3.6e-101 372.9 438 49.1
Eucgr.A01137 Eucalyptus grandis HOM05D004355 ORTHO05D005228 4.7e-101 372.5 268 65.3
Carub.0004s1891 Capsella rubella HOM05D004355 ORTHO05D005228 6.2e-101 372.1 464 47.8
CARHR131530 Cardamine hirsuta HOM05D004355 ORTHO05D005228 8.9e-100 368.2 457 47.5
FAN14G0897 Fragaria x ananassa HOM05D004355 ORTHO05D005228 5.8e-99 365.5 292 62.0
FAN14G5907 Fragaria x ananassa HOM05D004355 ORTHO05D005228 5.8e-99 365.5 292 62.0
Sed0012541 Sechium edule HOM05D004355 ORTHO05D005228 9.8e-99 364.8 433 49.0
RcHm_v2.0_Chr3g0469941 Rosa chinensis HOM05D004355 ORTHO05D005228 4.9e-98 362.5 296 61.8
ECA233G2716 Erigeron canadensis HOM05D004355 ORTHO05D005228 3.2e-97 359.8 430 46.7
Peaxi162Scf00123g01123 Petunia axillaris HOM05D004355 ORTHO05D005228 4.3e-94 349.4 441 45.8
Migut.J00528 Erythranthe guttata HOM05D004355 ORTHO05D005228 2.8e-93 346.7 443 45.8
GSVIVG01025706001 Vitis vinifera HOM05D004355 ORTHO05D005228 1.7e-90 337.4 264 65.5
Lsat_1_v5_gn_1_53141 Lactuca sativa HOM05D004355 ORTHO05D005228 4.1e-89 332.8 429 45.7
unitig_899.g15220 Utricularia gibba HOM05D002910 ORTHO05D003235 2.1e-88 330.5 446 43.9
FAN09G2012 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.3e-87 327.8 341 55.1
HanXRQChr13g0399881 Helianthus annuus HOM05D004355 ORTHO05D005228 3.9e-87 326.2 458 43.2
unitig_746.g26764 Utricularia gibba HOM05D004355 ORTHO05D005228 3.3e-86 323.2 449 42.1
Lj2P114T36 Lonicera japonica HOM05D004355 ORTHO05D005228 2.9e-82 310.1 266 58.3
MD12G1115900 Malus domestica HOM05D004355 ORTHO05D005228 4.2e-81 306.2 452 42.9
Lsat_1_v5_gn_6_31260 Lactuca sativa HOM05D004355 ORTHO05D005228 1.9e-78 297.4 433 41.3
CiPaw.09G174200 Carya illinoinensis HOM05D004355 ORTHO05D005228 4.3e-70 269.6 425 42.4
Lsat_1_v5_gn_6_31300 Lactuca sativa HOM05D004355 ORTHO05D005228 1.6e-69 267.7 436 37.8
Lsat_1_v5_gn_6_31200 Lactuca sativa HOM05D004355 ORTHO05D005228 4.0e-60 236.5 423 35.5
Lsat_1_v5_gn_6_70860 Lactuca sativa HOM05D004355 ORTHO05D005228 2.2e-58 230.7 416 35.6
Zm00001eb221710 Zea mays HOM05D004355 ORTHO05D005228 2.6e-51 207.2 448 34.4
Os10g0478400 Oryza sativa ssp. japonica HOM05D004355 ORTHO05D005228 8.4e-50 202.2 456 34.4
Zm00001eb045770 Zea mays HOM05D004355 ORTHO05D005228 5.7e-46 189.5 444 33.1
ATR0048G009 Amborella trichopoda HOM05D004355 ORTHO05D005228 2.2e-45 187.6 447 33.1
CDE06G0791 Ceratophyllum demersum HOM05D004355 ORTHO05D005228 3.2e-41 173.7 301 40.2
VMungo0540G2091 Vigna mungo HOM05D004355 ORTHO05D005228 7.2e-41 172.6 117 70.9
CDE04G2254 Ceratophyllum demersum HOM05D004355 ORTHO05D005228 3.0e-39 167.2 296 39.5
Actinidia31337 Actinidia chinensis HOM05D004355 ORTHO05D005228 8.8e-39 165.6 137 57.7
ECA233G2931 Erigeron canadensis HOM05D004355 ORTHO05D005228 3.3e-38 163.7 214 38.8
Nn2g11520 Nelumbo nucifera HOM05D004355 ORTHO05D005228 2.6e-35 154.1 231 45.5
ECA233G2161 Erigeron canadensis HOM05D004355 ORTHO05D005228 1.6e-32 144.8 438 30.1
Sc02g0001720 Simmondsia chinensis HOM05D004355 ORTHO05D005228 1.3e-29 135.2 100 64.0
BcaB02g09308 Brassica carinata HOM05D004355 ORTHO05D005228 4.1e-28 130.2 105 62.9
FAN09G2758 Fragaria x ananassa HOM05D004355 ORTHO05D005228 7.0e-28 129.4 107 57.9
ECA233G3839 Erigeron canadensis HOM05D004355 ORTHO05D005228 1.9e-25 121.3 238 32.8
Dinv34489 Davidia involucrata HOM05D004355 ORTHO05D005228 3.2e-25 120.6 215 39.5
Oeu045216.1 Olea europaea HOM05D004355 ORTHO05D005228 3.2e-25 120.6 439 28.0
Oeu045215.1 Olea europaea HOM05D004355 ORTHO05D005228 4.2e-25 120.2 413 28.6
Dinv23629 Davidia involucrata HOM05D004355 ORTHO05D005228 2.1e-24 117.9 215 39.5
FAN03G0487 Fragaria x ananassa HOM05D004355 ORTHO05D005228 2.0e-22 111.3 155 47.1
PSO801G0805 Papaver somniferum HOM05D004355 ORTHO05D005228 4.4e-22 110.2 214 40.2
SEGI_02022 Sequoiadendron giganteum HOM05D004355 ORTHO05D005228 1.3e-21 108.6 193 33.2
FAN05G3868 Fragaria x ananassa HOM05D004355 ORTHO05D005228 2.4e-20 104.4 142 50.7
SEGI_31737 Sequoiadendron giganteum HOM05D004355 ORTHO05D005228 2.2e-18 97.8 291 26.8
HPP92_015190 Vanilla planifolia HOM05D004355 ORTHO05D005228 6.5e-18 96.3 118 44.9
AL693U10010 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 4.7e-16 90.1 130 44.6
FAN26G1787 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.0e-15 89.0 155 42.6
Oeu045217.1 Olea europaea HOM05D004355 ORTHO05D005228 1.2e-14 85.5 235 29.8
Dinv15971 Davidia involucrata HOM05D004355 ORTHO05D005228 1.3e-13 82.0 102 47.1
Dinv18225 Davidia involucrata HOM05D004355 ORTHO05D005228 1.3e-13 82.0 102 47.1
FAN18G3656 Fragaria x ananassa HOM05D004355 ORTHO05D005228 3.8e-10 70.5 83 55.4
FAN06G3154 Fragaria x ananassa HOM05D004355 ORTHO05D005228 3.2e-09 67.4 75 54.7
FAN06G2627 Fragaria x ananassa HOM05D004355 ORTHO05D005228 9.4e-09 65.9 75 54.7
FAN05G5296 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.6e-08 65.1 70 52.9
Dinv07786 Davidia involucrata HOM05D004355 ORTHO05D005228 2.7e-08 64.3 59 55.9


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