Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039711 Chenopodium quinoa HOM05D006398 ORTHO05D007983 3.2e-56 221.9 141 100.0
AUR62036260 Chenopodium quinoa HOM05D006398 ORTHO05D007983 2.1e-52 209.1 141 95.7
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 2.5e-29 132.5 142 54.9
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.5e-29 132.5 141 57.4
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 2.9e-17 92.4 146 56.8
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 5.3e-11 71.6 147 34.7
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 7.0e-11 71.2 147 34.0
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 5.9e-10 68.2 147 34.0
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 5.9e-10 68.2 147 34.0
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 5.0e-09 65.1 147 41.5
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 6.5e-09 64.7 146 32.2
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 8.5e-09 64.3 147 32.7
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 8.5e-09 64.3 149 34.9
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 1.1e-08 63.9 143 32.2
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 1.5e-08 63.5 142 31.0
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 1.5e-08 63.5 143 32.2
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 2.5e-08 62.8 135 31.9
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 3.2e-08 62.4 143 33.6
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 7.2e-08 61.2 147 33.3
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 9.4e-08 60.8 143 31.5
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 9.4e-08 60.8 108 33.3
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 9.4e-08 60.8 143 31.5
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.2e-07 60.5 148 39.2
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 1.2e-07 60.5 141 31.2
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 1.6e-07 60.1 138 37.0
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.6e-07 60.1 128 32.8
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 2.1e-07 59.7 125 30.4
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 3.6e-07 58.9 143 35.0
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 4.7e-07 58.5 99 34.3
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 6.1e-07 58.2 141 32.6
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 6.1e-07 58.2 141 34.0
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 8.0e-07 57.8 146 28.1
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 1.4e-06 57.0 141 41.1
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 1.8e-06 56.6 143 30.8
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 1.8e-06 56.6 142 32.4
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 1.8e-06 56.6 135 30.4
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 2.3e-06 56.2 145 37.2
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.3e-06 56.2 148 35.8
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 2.3e-06 56.2 146 33.6
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 2.3e-06 56.2 143 30.1
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.0e-06 55.8 143 38.5
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 4.0e-06 55.5 145 42.8
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 4.0e-06 55.5 147 36.1
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 5.2e-06 55.1 144 43.8
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 6.7e-06 54.7 142 42.3
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 8.8e-06 54.3 133 34.6


User provided reference genes

Program Settings