Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039593 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.9e-101 372.5 185 100.0
AUR62031758 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.9e-56 223.0 187 60.4
AUR62041752 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.5e-55 218.8 184 60.9
AUR62044577 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.5e-55 218.8 184 60.9
AUR62041682 Chenopodium quinoa HOM05D000096 ORTHO05D000045 4.6e-39 165.2 142 59.9
RcHm_v2.0_Chr5g0013161 Rosa chinensis HOM05D000096 ORTHO05D000045 2.0e-37 159.8 184 46.2
COL.COLO4_30364 Corchorus olitorius HOM05D000096 ORTHO05D000045 2.0e-34 149.8 181 44.2
AUR62037399 Chenopodium quinoa HOM05D000096 ORTHO05D000045 5.9e-34 148.3 97 74.2
Aqoxy5G03346 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 2.2e-33 146.4 181 40.9
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 5.0e-33 145.2 182 41.2
AUR62040391 Chenopodium quinoa HOM05D000096 ORTHO05D000045 6.5e-33 144.8 92 73.9
Medtr0077s0060 Medicago truncatula HOM05D000096 ORTHO05D000045 3.2e-32 142.5 196 38.8
COL.COLO4_35927 Corchorus olitorius HOM05D000096 ORTHO05D000045 5.5e-32 141.7 172 42.4
RcHm_v2.0_Chr2g0140301 Rosa chinensis HOM05D000096 ORTHO05D000045 7.2e-32 141.4 173 43.4
FvH4_3g36631 Fragaria vesca HOM05D000096 ORTHO05D000045 9.4e-32 141.0 194 43.3
PSO063G0288 Papaver somniferum HOM05D000096 ORTHO05D000045 1.6e-31 140.2 196 40.8
PSO063G4809 Papaver somniferum HOM05D000096 ORTHO05D000045 1.6e-31 140.2 196 40.8
TPR.G18330 Trifolium pratense HOM05D000096 ORTHO05D000045 3.0e-30 136.0 183 40.4
QL04p091343 Quercus lobata HOM05D000096 ORTHO05D000045 3.9e-30 135.6 184 41.8
PSO832G3507 Papaver somniferum HOM05D000096 ORTHO05D000045 7.4e-29 131.3 202 34.7
AUR62004426 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.8e-28 129.4 119 61.3
PSO478G3149 Papaver somniferum HOM05D000096 ORTHO05D000045 4.2e-24 115.5 181 35.4
Aqoxy3G01378 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 5.5e-24 115.2 145 41.4
PSO700G0156 Papaver somniferum HOM05D000096 ORTHO05D000045 7.2e-24 114.8 188 34.6
FvH4_6g14351 Fragaria vesca HOM05D000096 ORTHO05D000045 1.2e-23 114.0 96 59.4
PSO357G0164 Papaver somniferum HOM05D000096 ORTHO05D000045 2.7e-23 112.8 182 36.3
PSO063G4686 Papaver somniferum HOM05D000096 ORTHO05D000045 1.4e-22 110.5 170 38.2
COL.COLO4_15176 Corchorus olitorius HOM05D000096 ORTHO05D000045 6.7e-22 108.2 93 51.6
Medtr0003s0430 Medicago truncatula HOM05D000096 ORTHO05D020878 1.1e-19 100.9 192 32.3
PSO210G0169 Papaver somniferum HOM05D000096 ORTHO05D000045 5.3e-19 98.6 174 35.6
FvH4_5g25551 Fragaria vesca HOM05D000096 ORTHO05D000045 2.1e-15 86.7 120 40.0
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.4e-14 84.0 157 32.5
A08p06590 Brassica napus HOM05D000096 ORTHO05D000045 7.5e-13 78.2 187 33.7
BraA08t32675Z Brassica rapa HOM05D000096 ORTHO05D000045 7.5e-13 78.2 187 32.1
Phvul.008G074400 Phaseolus vulgaris HOM05D000096 ORTHO05D000045 9.8e-13 77.8 179 27.4
BolC5t33121H Brassica oleracea HOM05D000096 ORTHO05D000045 1.7e-12 77.0 189 31.2
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.8e-12 76.3 180 30.6
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.3e-12 75.1 180 30.0
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.3e-12 75.1 180 30.0
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.3e-12 75.1 180 30.0
BraA07t28121Z Brassica rapa HOM05D000096 ORTHO05D000045 8.3e-12 74.7 196 32.1
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-11 74.3 180 28.9
AUR62018339 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.8e-11 73.6 219 32.0
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 1.8e-11 73.6 173 28.3
BolC7t41213H Brassica oleracea HOM05D000096 ORTHO05D000045 2.4e-11 73.2 196 32.1
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.4e-11 73.2 180 28.3
C07p07960 Brassica napus HOM05D000096 ORTHO05D000045 5.4e-11 72.0 196 32.1
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.0e-11 71.6 160 30.6
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 7.0e-11 71.6 180 30.0
AUR62038719 Chenopodium quinoa HOM05D000096 ORTHO05D000045 9.1e-11 71.2 210 31.4
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 1.2e-10 70.9 179 26.8
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.6e-10 70.5 180 27.8
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.0e-10 70.1 180 27.8
C09p27110 Brassica napus HOM05D000096 ORTHO05D000045 2.7e-10 69.7 193 30.6
BolC3t14259H Brassica oleracea HOM05D000096 ORTHO05D000045 2.7e-10 69.7 193 30.6
BraA02t08215Z Brassica rapa HOM05D000096 ORTHO05D000045 2.7e-10 69.7 194 29.9
CiPaw.01G058000 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.5e-10 69.3 180 28.9
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.5e-10 69.3 180 27.2
ECA240G0844 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.5e-10 69.3 180 27.2
FvH4_5g26611 Fragaria vesca HOM05D000096 ORTHO05D000045 3.5e-10 69.3 160 31.9
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.5e-10 68.9 180 28.9
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.9e-10 68.6 173 27.7
C03p18670 Brassica napus HOM05D000096 ORTHO05D000045 7.7e-10 68.2 193 30.1
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 7.7e-10 68.2 182 27.5
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.0e-09 67.8 198 27.3
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.0e-09 67.8 174 29.9
BolC7t45259H Brassica oleracea HOM05D000096 ORTHO05D009779 1.3e-09 67.4 194 29.9
PGR119G0932 Punica granatum HOM05D000096 ORTHO05D000045 1.3e-09 67.4 182 33.5
CANSAT25G0821 Cannabis sativa HOM05D000096 ORTHO05D000045 2.3e-09 66.6 181 28.2
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-09 66.2 180 27.2
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.9e-09 66.2 237 27.0
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 5.0e-09 65.5 181 28.7
Hma1.2p1_2176F.1_g316140 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 5.0e-09 65.5 186 28.5
A02p32450 Brassica napus HOM05D000096 ORTHO05D000045 6.5e-09 65.1 185 29.7
C04p11960 Brassica napus HOM05D000096 ORTHO05D000045 6.5e-09 65.1 175 32.6
C04p25990 Brassica napus HOM05D000096 ORTHO05D000045 6.5e-09 65.1 175 32.6
BraA09t38421Z Brassica rapa HOM05D000096 ORTHO05D000045 6.5e-09 65.1 186 32.3
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 8.6e-09 64.7 181 28.2
AUR62040088 Chenopodium quinoa HOM05D000096 ORTHO05D000045 8.6e-09 64.7 210 30.0
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 8.6e-09 64.7 208 27.9
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 8.6e-09 64.7 171 29.2
Hund03638 Selenicereus undatus HOM05D000096 ORTHO05D000045 1.1e-08 64.3 180 28.9
A03p68710 Brassica napus HOM05D000096 ORTHO05D000045 1.5e-08 63.9 184 29.9
A07p12900 Brassica napus HOM05D000096 ORTHO05D000045 1.5e-08 63.9 184 29.9
BolC2t07401H Brassica oleracea HOM05D011319 ORTHO05D031747 1.5e-08 63.9 173 28.9
BraA04t16942Z Brassica rapa HOM05D000096 ORTHO05D000045 1.5e-08 63.9 184 29.9
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 1.5e-08 63.9 171 28.7
Atru.chr3.2970 Acer truncatum HOM05D000096 ORTHO05D000045 1.9e-08 63.5 180 28.3
CiPaw.15G180000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.9e-08 63.5 180 27.8
A03p68310 Brassica napus HOM05D000096 ORTHO05D000045 3.2e-08 62.8 184 29.9
ECA233G0447 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.2e-08 62.8 66 43.9
Potri.011G042150 Populus trichocarpa HOM05D000096 ORTHO05D000045 3.2e-08 62.8 182 29.7
C05p51130 Brassica napus HOM05D000096 ORTHO05D000045 4.2e-08 62.4 175 32.0
C06p01070 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-08 62.4 185 30.3
FvH4_3g10331 Fragaria vesca HOM05D000096 ORTHO05D000045 4.2e-08 62.4 175 29.7
Rhsim06G0045600 Rhododendron simsii HOM05D000096 ORTHO05D000045 4.2e-08 62.4 178 29.2
PSO170G4068 Papaver somniferum HOM05D000096 ORTHO05D000045 7.2e-08 61.6 150 28.7
PSO541G6239 Papaver somniferum HOM05D000096 ORTHO05D000045 7.2e-08 61.6 63 47.6
PSO017G5134 Papaver somniferum HOM05D000096 ORTHO05D000045 9.5e-08 61.2 85 36.5
BolC4t25353H Brassica oleracea HOM05D000096 ORTHO05D000045 1.2e-07 60.8 178 29.8
ECA246G2519 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-07 60.8 195 28.7
Potri.001G185950 Populus trichocarpa HOM05D000096 ORTHO05D000045 1.2e-07 60.8 182 29.1
C04p41010 Brassica napus HOM05D000096 ORTHO05D000045 1.6e-07 60.5 199 27.1
BolC4t25684H Brassica oleracea HOM05D000096 ORTHO05D000045 1.6e-07 60.5 199 27.1
AUR62014161 Chenopodium quinoa HOM05D007611 ORTHO05D000045 1.6e-07 60.5 40 70.0
Glyma.18G152100 Glycine max HOM05D000096 ORTHO05D000045 1.6e-07 60.5 184 29.9
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 1.6e-07 60.5 180 27.2
Rhsim12G0094200 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.6e-07 60.5 178 28.7
A02p01740 Brassica napus HOM05D000096 ORTHO05D000045 2.1e-07 60.1 185 28.1
Hma1.2p1_0051F.1_g029450 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.1e-07 60.1 186 26.9
Oeu038389.1 Olea europaea HOM05D000096 ORTHO05D000045 2.1e-07 60.1 180 27.8
C02p36440 Brassica napus HOM05D000096 ORTHO05D000045 2.8e-07 59.7 185 28.6
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 2.8e-07 59.7 168 29.2
Dinv21969 Davidia involucrata HOM05D000096 ORTHO05D000045 2.8e-07 59.7 177 25.4
TWI77G0609 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 2.8e-07 59.7 184 31.0
A02p09270 Brassica napus HOM05D000096 ORTHO05D000045 3.6e-07 59.3 214 26.2
C09p36130 Brassica napus HOM05D000096 ORTHO05D018655 3.6e-07 59.3 214 26.6
BolC9t56452H Brassica oleracea HOM05D000096 ORTHO05D000045 3.6e-07 59.3 214 26.6
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-07 59.3 173 28.3
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-07 59.3 173 28.3
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-07 59.3 173 28.3
Hma1.2p1_0217F.1_g091480 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 4.7e-07 58.9 179 26.3
BraA02t07162Z Brassica rapa HOM05D000096 ORTHO05D000045 6.1e-07 58.5 185 28.6
ECA236G0125 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.1e-07 58.5 195 28.2
Glyma.09G061100 Glycine max HOM05D000096 ORTHO05D000045 6.1e-07 58.5 184 27.2
Oeu032904.1 Olea europaea HOM05D000096 ORTHO05D000045 6.1e-07 58.5 170 27.6
C05p25370 Brassica napus HOM05D000096 ORTHO05D000045 8.0e-07 58.2 185 28.6
ECA232G2412 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.0e-07 58.2 187 27.8
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.0e-07 58.2 173 27.7
Hma1.2p1_0350F.1_g132640 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 8.0e-07 58.2 151 30.5
Oeu005870.1 Olea europaea HOM05D000096 ORTHO05D000045 1.0e-06 57.8 167 26.3
Rhsim11G0010600 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.0e-06 57.8 175 30.3
EL10Ac5g11733 Beta vulgaris HOM05D000096 ORTHO05D000045 1.4e-06 57.4 166 25.9
A01p15630 Brassica napus HOM05D000096 ORTHO05D000045 1.4e-06 57.4 185 28.1
C09p46800 Brassica napus HOM05D000096 ORTHO05D000045 1.4e-06 57.4 185 27.6
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.4e-06 57.4 141 31.2
ECA246G4273 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.4e-06 57.4 66 42.4
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 1.8e-06 57.0 166 25.9
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 2.3e-06 56.6 166 25.9
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-06 56.6 181 26.5
C09p37720 Brassica napus HOM05D000096 ORTHO05D000045 3.0e-06 56.2 185 28.6
Medtr8g447120 Medicago truncatula HOM05D000096 ORTHO05D000045 3.0e-06 56.2 99 34.3
ECA236G5075 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.0e-06 55.8 211 27.5
Hma1.2p1_0146F.1_g065470 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 4.0e-06 55.8 179 25.7
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 5.2e-06 55.5 155 29.0
BraA09t38075Z Brassica rapa HOM05D000096 ORTHO05D020038 5.2e-06 55.5 148 30.4
CARHR108030 Cardamine hirsuta HOM05D000096 ORTHO05D000045 5.2e-06 55.5 138 28.3
EL10Ac6g14190 Beta vulgaris HOM05D000096 ORTHO05D000045 6.8e-06 55.1 109 31.2
C03p46920 Brassica napus HOM05D000096 ORTHO05D000045 6.8e-06 55.1 147 29.9
BraA01t02638Z Brassica rapa HOM05D000096 ORTHO05D020038 6.8e-06 55.1 148 29.7
Hund08902 Selenicereus undatus HOM05D000096 ORTHO05D003441 6.8e-06 55.1 120 31.7
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 8.8e-06 54.7 166 25.3
BolC8t47057H Brassica oleracea HOM05D000096 ORTHO05D000045 8.8e-06 54.7 139 30.9
Cc02_g03220 Coffea canephora HOM05D000096 ORTHO05D000045 8.8e-06 54.7 129 28.7


User provided reference genes

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