Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 6.9e-125 450.7 229 100.0
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.1e-103 380.2 257 79.8
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.7e-73 279.3 194 74.7
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 5.7e-71 271.6 251 60.2
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 8.8e-64 247.7 242 56.6
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-61 240.7 256 53.1
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.4e-61 240.4 256 52.7
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.4e-61 239.6 256 52.7
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 3.1e-61 239.2 256 52.3
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 3.1e-61 239.2 256 54.3
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 4.1e-61 238.8 256 52.3
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.2e-60 237.3 256 52.0
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 7.7e-60 234.6 256 53.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 5.0e-59 231.9 256 52.0
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.5e-58 230.3 256 52.7
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 4.2e-58 228.8 251 53.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.2e-58 228.8 256 52.3
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 9.4e-58 227.6 256 49.6
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.6e-57 226.9 251 52.6
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.6e-57 226.9 256 52.3
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.0e-56 224.2 257 51.0
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.8e-56 223.4 256 52.3
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.0e-56 222.6 256 52.3
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 6.8e-56 221.5 242 52.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 2.6e-55 219.5 261 49.8
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.6e-55 219.5 256 50.0
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 4.4e-55 218.8 256 49.2
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.4e-55 218.8 196 61.7
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 7.5e-55 218.0 256 49.6
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.3e-54 217.2 256 49.2
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.7e-54 216.9 257 47.9
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.7e-54 216.9 257 51.0
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.1e-53 214.2 256 50.4
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.1e-53 214.2 256 48.8
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.4e-53 213.8 256 50.4
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.8e-53 213.4 243 50.6
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.4e-53 213.0 256 48.4
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 3.1e-53 212.6 242 50.8
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 4.1e-53 212.2 256 48.8
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.0e-53 211.5 256 48.8
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 7.0e-53 211.5 256 50.4
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.2e-52 210.7 256 48.4
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.6e-52 210.3 257 50.6
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.7e-52 209.5 243 50.2
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 4.5e-52 208.8 256 50.4
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.7e-51 206.8 242 49.6
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 2.3e-51 206.5 256 47.3
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 3.8e-51 205.7 257 47.9
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 6.6e-51 204.9 240 50.8
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 1.9e-50 203.4 253 47.0
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.5e-50 203.0 250 48.0
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 3.3e-50 202.6 242 48.8
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 5.5e-50 201.8 196 57.7
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.8e-49 199.5 197 52.8
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 2.8e-49 199.5 243 49.8
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.8e-49 199.5 256 46.5
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 4.7e-49 198.7 243 47.7
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 6.1e-49 198.4 254 46.1
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 8.0e-49 198.0 240 50.0
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.8e-48 196.8 242 47.1
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 5.2e-48 195.3 245 46.1
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 5.2e-48 195.3 245 46.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 5.2e-48 195.3 245 46.1
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.2e-47 194.1 197 54.8
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 2.0e-47 193.4 237 48.5
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 2.6e-47 193.0 245 45.7
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.6e-47 193.0 196 55.1
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.4e-47 192.6 246 44.7
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 3.4e-47 192.6 243 47.7
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 3.4e-47 192.6 196 53.6
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.4e-47 192.2 193 53.9
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.4e-47 192.2 196 55.1
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 5.7e-47 191.8 245 46.1
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 5.7e-47 191.8 245 46.1
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 5.7e-47 191.8 197 51.3
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 9.8e-47 191.0 245 45.7
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.8e-47 191.0 193 53.4
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.7e-46 190.3 197 50.8
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 2.2e-46 189.9 244 48.0
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.2e-46 189.9 197 50.8
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.8e-46 189.5 245 47.3
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.8e-46 189.5 245 45.3
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 2.8e-46 189.5 245 45.7
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 6.3e-46 188.3 201 52.2
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 8.3e-46 188.0 245 45.7
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 8.3e-46 188.0 245 44.5
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.9e-43 179.5 240 43.3
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 2.9e-43 179.5 197 50.3
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 3.9e-43 179.1 223 48.0
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 5.6e-42 175.3 218 50.0
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.0e-40 171.0 243 43.6
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 5.2e-40 168.7 257 42.0
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.9e-38 162.9 189 49.7
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 4.9e-38 162.2 244 43.0
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 1.4e-37 160.6 189 46.6
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 2.0e-36 156.8 196 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.1e-32 144.4 199 42.2
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 2.9e-30 136.3 153 51.6
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 6.4e-30 135.2 116 61.2
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.4e-29 133.3 197 43.1
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.9e-27 125.9 198 42.4
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.5e-26 123.2 117 55.6
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 1.7e-19 100.5 95 51.6
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 6.6e-19 98.6 130 46.2
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.3e-18 95.1 74 67.6
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.6e-17 92.8 134 44.8
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 6.2e-17 92.0 97 52.6
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.4e-16 90.9 80 57.5
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 9.9e-15 84.7 193 35.8
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.8e-09 66.6 46 69.6
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.8e-09 66.6 69 55.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 2.8e-09 66.6 148 33.1
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-07 61.2 72 48.6
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 2.9e-06 56.6 128 28.9


User provided reference genes

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