Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 6.6e-260 900.2 465 100.0
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.2e-180 634.8 464 72.8
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 9.3e-137 491.1 475 57.9
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 2.2e-114 416.8 381 58.5
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 5.5e-113 412.1 471 52.2
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.0e-111 407.9 382 57.1
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 3.0e-111 406.4 406 54.4
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 6.7e-111 405.2 412 54.1
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 2.0e-110 403.7 459 50.5
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 2.5e-110 403.3 463 50.1
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.3e-110 402.9 453 50.3
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 7.4e-110 401.7 467 49.9
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.3e-109 401.0 383 54.8
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.3e-109 401.0 381 55.4
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 2.8e-109 399.8 496 49.0
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 6.3e-109 398.7 451 49.9
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 6.3e-109 398.7 466 50.0
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 6.9e-108 395.2 409 52.8
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.2e-107 394.4 370 56.2
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.6e-107 393.3 375 54.9
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 2.6e-107 393.3 389 54.0
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 5.9e-107 392.1 477 48.6
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 7.7e-107 391.7 382 54.2
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 1.7e-106 390.6 375 55.5
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.7e-106 390.6 390 53.6
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 2.2e-106 390.2 360 57.2
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 3.8e-106 389.4 392 54.6
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 3.8e-106 389.4 384 53.9
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 3.8e-106 389.4 382 53.7
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 8.5e-106 388.3 449 50.1
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.5e-106 388.3 375 55.2
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 1.9e-105 387.1 387 53.2
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 2.5e-105 386.7 378 53.4
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 3.2e-105 386.3 402 52.2
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 4.2e-105 386.0 382 53.4
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 7.2e-105 385.2 377 53.6
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 1.2e-104 384.4 423 51.5
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.6e-104 384.0 484 47.1
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 2.1e-104 383.6 368 53.8
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 3.6e-104 382.9 526 44.9
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 6.1e-104 382.1 406 51.7
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.8e-103 380.6 462 46.5
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.3e-103 380.2 385 53.0
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 2.3e-103 380.2 475 45.9
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 5.1e-103 379.0 442 48.4
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.7e-103 378.6 377 52.3
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 8.8e-103 378.3 442 48.9
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 2.0e-102 377.1 398 52.5
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 3.3e-102 376.3 468 48.1
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 3.3e-102 376.3 376 54.5
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 7.4e-102 375.2 403 51.9
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 7.4e-102 375.2 379 53.0
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.3e-101 374.4 449 49.2
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 2.8e-101 373.2 369 53.4
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 3.1e-100 369.8 459 46.8
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.1e-100 369.4 364 53.6
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 4.1e-100 369.4 399 52.1
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 5.3e-100 369.0 409 50.1
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 5.3e-100 369.0 384 51.3
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 5.3e-100 369.0 376 54.3
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 5.3e-100 369.0 383 49.6
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 7.0e-100 368.6 381 51.2
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.2e-99 367.9 377 51.5
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 3.5e-99 366.3 443 44.9
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 3.5e-99 366.3 389 50.1
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.9e-99 365.5 335 60.0
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 5.9e-99 365.5 451 46.1
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 5.9e-99 365.5 346 54.6
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 1.0e-98 364.8 364 53.6
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.5e-97 360.9 429 48.5
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 4.2e-97 359.4 313 59.1
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.5e-97 359.0 358 52.5
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 9.4e-97 358.2 480 44.2
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 1.2e-96 357.8 369 51.5
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.6e-96 357.5 376 49.7
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-96 357.5 372 52.4
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 3.6e-96 356.3 368 51.1
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.1e-96 355.5 375 52.0
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.0e-95 354.8 391 49.4
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 1.4e-95 354.4 472 44.3
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.8e-95 354.0 381 51.2
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 1.8e-95 354.0 366 50.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 2.3e-95 353.6 361 53.7
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 1.5e-94 350.9 486 45.7
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.7e-93 346.3 393 49.1
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 9.1e-92 341.7 385 49.6
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 2.7e-91 340.1 348 53.2
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 2.7e-91 340.1 381 49.9
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.2e-90 337.0 355 51.3
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 1.5e-89 334.3 337 55.2
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 3.6e-88 329.7 356 49.7
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.2e-80 304.7 395 47.3
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.0e-79 300.1 348 48.3
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 3.0e-79 300.1 395 46.3
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 4.5e-75 286.2 379 45.4
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 4.5e-75 286.2 492 37.8
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.7e-69 267.7 393 42.0
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 4.1e-68 263.1 274 53.6
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.3e-66 257.3 372 44.1
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 9.5e-65 251.9 210 61.4
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.1e-60 238.4 201 61.7
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.2e-59 235.0 350 38.9
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 2.1e-56 224.2 247 49.8
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 2.2e-53 214.2 251 49.8
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.6e-51 206.5 154 63.6
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 7.8e-51 205.7 267 46.4
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.3e-50 204.1 338 39.3
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 7.3e-49 199.1 243 45.7
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.1e-39 168.7 368 32.1
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 5.2e-39 166.4 308 36.7
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 2.0e-38 164.5 134 59.0
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 1.3e-37 161.8 121 62.0
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 8.4e-37 159.1 208 44.2
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.4e-31 141.7 256 38.7
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.2e-29 134.4 147 51.0
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 3.8e-29 133.7 135 54.1
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 7.1e-28 129.4 265 35.8
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 3.9e-26 123.6 105 58.1
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.8e-23 114.8 90 55.6
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 2.4e-23 114.4 87 59.8
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 6.9e-23 112.8 157 42.7
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 1.2e-22 112.1 78 66.7
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.4e-20 105.1 77 68.8
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 9.3e-20 102.4 101 53.5
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.6e-19 101.7 62 75.8
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 1.3e-18 98.6 224 33.9
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 2.5e-17 94.4 61 73.8
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 4.3e-17 93.6 66 65.2
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 2.6e-14 84.3 104 49.0
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 5.8e-14 83.2 371 22.9
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 5.8e-14 83.2 90 48.9
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 1.7e-13 81.6 95 47.4
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 2.9e-13 80.9 262 30.2
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 4.9e-13 80.1 107 45.8
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 1.0e-10 72.4 67 47.8
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 1.3e-10 72.0 56 62.5
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.5e-09 68.6 309 26.2
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.5e-09 67.8 376 21.8
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 7.4e-09 66.2 61 52.5
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 4.8e-08 63.5 384 23.7
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 1.0e-05 55.8 367 22.6


User provided reference genes

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