Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 5.5e-167 590.9 299 100.0
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 6.0e-137 491.1 317 80.4
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 2.0e-116 422.9 307 72.3
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 2.2e-107 392.9 306 68.3
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 2.4e-106 389.4 296 71.3
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 3.2e-106 389.0 296 67.9
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 9.3e-106 387.5 256 75.8
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.6e-105 386.7 204 95.1
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 3.5e-105 385.6 284 70.8
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 7.9e-105 384.4 286 68.5
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 7.9e-105 384.4 295 69.2
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.8e-104 383.3 284 71.1
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 6.7e-104 381.3 299 68.2
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 8.7e-104 380.9 287 71.8
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 1.5e-103 380.2 289 71.3
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.9e-103 379.8 287 71.8
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 4.3e-103 378.6 300 67.0
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 4.3e-103 378.6 292 69.5
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 4.3e-103 378.6 288 70.5
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 9.6e-103 377.5 255 71.8
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 9.6e-103 377.5 285 68.8
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 2.1e-102 376.3 265 73.2
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 6.2e-102 374.8 293 68.3
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 8.2e-102 374.4 311 66.6
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.1e-101 374.0 253 74.7
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.8e-101 373.2 253 71.5
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 5.3e-101 371.7 271 72.3
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 5.3e-101 371.7 271 72.3
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 9.0e-101 370.9 264 73.1
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 2.0e-100 369.8 302 64.9
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 1.3e-99 367.1 288 70.5
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 1.3e-99 367.1 288 67.4
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 2.2e-99 366.3 269 71.0
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 2.9e-99 365.9 297 67.0
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 2.9e-99 365.9 287 67.6
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 6.5e-99 364.8 295 67.1
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 6.5e-99 364.8 284 68.0
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.1e-98 364.0 269 70.3
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.1e-98 364.0 273 68.1
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.4e-98 363.6 292 65.8
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 1.9e-98 363.2 267 70.8
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 2.5e-98 362.8 243 74.9
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 7.1e-98 361.3 303 63.0
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.2e-97 360.5 287 67.2
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.2e-97 360.5 283 67.8
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 1.6e-97 360.1 276 68.5
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 1.6e-97 360.1 297 64.6
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 2.1e-97 359.8 263 70.0
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 2.1e-97 359.8 271 68.3
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 6.0e-97 358.2 291 67.7
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 7.9e-97 357.8 272 67.6
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 7.9e-97 357.8 251 70.9
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 7.9e-97 357.8 305 63.0
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 1.0e-96 357.5 250 74.0
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 1.8e-96 356.7 304 63.5
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 3.0e-96 355.9 272 67.3
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 3.9e-96 355.5 294 65.3
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 3.9e-96 355.5 270 68.5
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 5.1e-96 355.1 302 62.6
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 6.7e-96 354.8 256 69.9
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 1.1e-95 354.0 293 63.1
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 1.1e-95 354.0 266 68.4
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.9e-95 353.2 270 67.8
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 1.9e-95 353.2 269 70.6
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 3.3e-95 352.4 273 70.0
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 5.7e-95 351.7 280 66.1
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 5.7e-95 351.7 269 67.7
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 6.3e-94 348.2 298 62.8
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.1e-93 347.4 303 61.1
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 3.1e-93 345.9 253 71.5
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 3.1e-93 345.9 269 70.3
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 1.2e-92 344.0 245 70.2
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 5.0e-91 338.6 247 70.9
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.9e-90 336.7 301 60.8
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.9e-90 336.7 301 60.8
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 4.2e-90 335.5 289 64.4
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 9.4e-90 334.3 237 70.0
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.6e-89 333.6 241 69.7
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 2.1e-89 333.2 247 70.0
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 2.1e-89 333.2 261 69.0
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 2.7e-89 332.8 280 63.6
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 1.8e-88 330.1 271 64.2
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 3.0e-88 329.3 255 64.7
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 4.3e-87 325.5 292 62.7
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 2.8e-86 322.8 286 62.2
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 1.1e-85 320.9 258 65.5
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 6.5e-83 311.6 245 63.7
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.9e-82 310.1 224 70.1
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 5.5e-82 308.5 257 62.3
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 8.8e-80 301.2 225 69.8
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 3.1e-77 292.7 270 56.7
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 7.0e-77 291.6 199 73.4
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 7.7e-76 288.1 261 60.5
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 2.2e-75 286.6 254 60.6
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 1.8e-69 266.9 183 71.0
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 4.5e-68 262.3 254 57.1
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 9.7e-63 244.6 227 54.2
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.5e-60 235.7 287 51.6
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 1.0e-59 234.6 229 52.4
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.7e-54 217.2 227 47.6
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.4e-45 187.6 128 71.9
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 8.6e-43 178.3 248 39.1
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 7.3e-42 175.3 234 40.2
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 9.2e-37 158.3 245 36.7
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 6.6e-35 152.1 248 42.7
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.7e-30 137.5 92 69.6
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 6.0e-28 129.0 127 55.1
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 7.1e-21 105.5 88 56.8
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 2.7e-20 103.6 121 46.3
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 1.1e-16 91.7 102 52.0
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 6.0e-12 75.9 54 66.7
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.9e-10 70.9 103 46.6
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 9.6e-10 68.6 53 52.8
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 3.6e-09 66.6 60 56.7
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 3.6e-09 66.6 60 56.7
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 3.6e-09 66.6 61 54.1
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 1.1e-08 65.1 60 55.0
CDE06G0154 Ceratophyllum demersum HOM05D006923 ORTHO05D130285 3.8e-06 56.6 40 72.5


User provided reference genes

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