Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 2.2e-67 258.8 132 100.0
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 7.8e-65 250.4 131 96.9
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 8.2e-46 187.2 130 75.4
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 2.3e-40 169.1 124 71.0
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 9.7e-31 137.1 131 58.0
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 2.2e-30 136.0 142 52.1
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 4.8e-30 134.8 130 54.6
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 1.4e-29 133.3 142 53.5
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 6.9e-29 131.0 130 53.8
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 9.1e-29 130.6 130 54.6
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 1.2e-28 130.2 130 53.1
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 1.2e-28 130.2 130 53.1
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 1.2e-28 130.2 130 54.6
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 2.0e-28 129.4 139 52.5
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 4.5e-28 128.3 104 67.3
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 4.5e-28 128.3 143 49.7
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 5.9e-28 127.9 141 51.1
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 7.7e-28 127.5 139 51.1
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 2.2e-27 125.9 138 51.4
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 3.8e-27 125.2 139 51.1
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 1.1e-26 123.6 130 51.5
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 1.9e-26 122.9 140 50.0
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 1.9e-26 122.9 133 50.4
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 5.5e-26 121.3 142 47.9
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 7.2e-26 120.9 132 49.2
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 9.4e-26 120.6 132 50.8
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 9.4e-26 120.6 142 47.2
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 1.2e-25 120.2 143 51.0
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 1.6e-25 119.8 142 48.6
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 1.6e-25 119.8 143 46.2
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 1.6e-25 119.8 127 49.6
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 2.1e-25 119.4 143 46.9
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 2.7e-25 119.0 141 47.5
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 4.7e-25 118.2 137 48.9
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 6.1e-25 117.9 142 46.5
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 6.1e-25 117.9 142 47.2
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 1.0e-24 117.1 143 44.1
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 1.4e-24 116.7 138 49.3
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 2.3e-24 115.9 145 45.5
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 2.3e-24 115.9 143 45.5
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 3.0e-24 115.5 143 49.0
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 3.9e-24 115.2 142 47.2
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 3.9e-24 115.2 131 48.9
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 3.9e-24 115.2 142 46.5
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 5.1e-24 114.8 140 47.9
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 5.1e-24 114.8 138 49.3
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 5.1e-24 114.8 142 45.8
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 6.7e-24 114.4 142 45.8
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 8.8e-24 114.0 142 45.8
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 8.8e-24 114.0 138 49.3
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 8.8e-24 114.0 138 49.3
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 8.8e-24 114.0 142 45.8
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.1e-23 113.6 138 49.3
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.5e-23 113.2 138 49.3
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 1.5e-23 113.2 134 49.3
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 3.3e-23 112.1 142 47.9
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 7.4e-23 110.9 141 46.8
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 7.4e-23 110.9 141 43.3
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 1.3e-22 110.2 142 44.4
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 1.3e-22 110.2 143 44.8
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 1.7e-22 109.8 131 47.3
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 2.2e-22 109.4 141 44.7
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 2.2e-22 109.4 138 50.7
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 3.7e-22 108.6 144 45.8
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 4.8e-22 108.2 140 45.7
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 4.8e-22 108.2 157 43.3
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 8.2e-22 107.5 131 46.6
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 1.1e-21 107.1 141 42.6
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 3.1e-21 105.5 132 43.9
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 4.1e-21 105.1 141 42.6
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 4.1e-21 105.1 140 45.7
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 4.1e-21 105.1 142 43.0
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 6.9e-21 104.4 131 44.3
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 9.1e-21 104.0 141 44.7
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 9.1e-21 104.0 137 48.9
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 1.2e-20 103.6 138 45.7
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 3.4e-20 102.1 142 43.7
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 5.9e-20 101.3 132 43.9
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 1.0e-19 100.5 151 42.4
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 1.0e-19 100.5 131 43.5
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 1.3e-19 100.1 139 46.0
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 1.7e-19 99.8 138 44.9
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 2.9e-19 99.0 140 44.3
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 6.5e-19 97.8 147 38.1
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 1.9e-18 96.3 92 52.2
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 7.2e-18 94.4 117 46.2
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 7.2e-18 94.4 131 42.0
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 9.4e-18 94.0 131 46.6
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 1.6e-17 93.2 104 50.0
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 1.1e-15 87.0 100 50.0
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 2.6e-15 85.9 96 51.0
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 9.7e-15 84.0 118 43.2
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 1.7e-14 83.2 116 44.0
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 2.8e-14 82.4 102 47.1
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 3.1e-13 79.0 91 46.2
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 4.1e-13 78.6 91 48.4
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 1.6e-12 76.6 135 36.3
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 1.6e-12 76.6 96 49.0
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 3.5e-12 75.5 108 46.3
THA.LOC104822186 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 3.5e-12 75.5 132 37.9
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 2.2e-11 72.8 98 46.9
C03p84900 Brassica napus HOM05D000455 ORTHO05D008451 8.5e-11 70.9 78 48.7
BolC3t20782H Brassica oleracea HOM05D000455 ORTHO05D008451 8.5e-11 70.9 78 48.7
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 5.5e-10 68.2 127 35.4
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 9.4e-10 67.4 99 39.4


User provided reference genes

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