Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 4.6e-57 224.2 102 100.0
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 8.8e-56 219.9 102 97.1
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 3.3e-55 218.0 102 97.1
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 3.7e-54 214.5 102 95.1
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 5.3e-53 210.7 122 82.8
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 1.1e-47 193.0 93 89.2
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 2.0e-47 192.2 93 87.1
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 2.2e-46 188.7 93 88.2
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 3.7e-46 188.0 92 88.0
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 3.7e-46 188.0 92 88.0
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 4.8e-46 187.6 92 87.0
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 4.8e-46 187.6 95 85.3
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 6.3e-46 187.2 95 84.2
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 6.3e-46 187.2 92 87.0
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 6.3e-46 187.2 91 89.0
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 6.3e-46 187.2 93 84.9
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 8.2e-46 186.8 95 84.2
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 8.2e-46 186.8 95 84.2
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 1.1e-45 186.4 93 84.9
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.4e-45 186.0 92 88.0
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 1.4e-45 186.0 92 88.0
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 1.4e-45 186.0 93 83.9
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.4e-45 186.0 93 83.9
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.4e-45 186.0 93 83.9
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.8e-45 185.7 93 83.9
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.8e-45 185.7 93 83.9
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 1.8e-45 185.7 93 83.9
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 2.4e-45 185.3 95 82.1
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 3.1e-45 184.9 92 85.9
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 9.1e-45 183.3 91 85.7
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 9.1e-45 183.3 95 80.0
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 1.6e-44 182.6 91 85.7
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 1.6e-44 182.6 101 79.2
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 2.0e-44 182.2 93 79.6
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 2.0e-44 182.2 91 85.7
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.0e-44 182.2 95 82.1
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 2.0e-44 182.2 93 81.7
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 2.6e-44 181.8 93 83.9
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 3.5e-44 181.4 91 86.8
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 3.5e-44 181.4 95 80.0
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 3.5e-44 181.4 93 84.9
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 4.5e-44 181.0 92 82.6
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 4.5e-44 181.0 93 83.9
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 4.5e-44 181.0 93 83.9
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 5.9e-44 180.6 91 85.7
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.9e-44 180.6 93 82.8
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 5.9e-44 180.6 91 82.4
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 7.7e-44 180.3 93 82.8
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 1.0e-43 179.9 101 78.2
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 1.3e-43 179.5 93 76.3
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 1.3e-43 179.5 95 78.9
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.7e-43 179.1 91 85.7
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 1.7e-43 179.1 95 78.9
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 1.7e-43 179.1 100 76.0
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 2.2e-43 178.7 89 85.4
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 2.2e-43 178.7 92 84.8
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 2.2e-43 178.7 100 81.0
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 2.9e-43 178.3 100 75.0
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 2.9e-43 178.3 93 82.8
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.8e-43 177.9 95 80.0
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 3.8e-43 177.9 91 84.6
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 5.0e-43 177.6 92 81.5
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 5.0e-43 177.6 91 82.4
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 8.5e-43 176.8 93 80.6
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 8.5e-43 176.8 93 79.6
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.1e-42 176.4 91 81.3
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.1e-42 176.4 91 81.3
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.1e-42 176.4 93 78.5
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 1.5e-42 176.0 93 79.6
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 1.9e-42 175.6 96 76.0
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 1.9e-42 175.6 96 76.0
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 2.5e-42 175.3 105 75.2
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 3.2e-42 174.9 93 78.5
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 4.2e-42 174.5 89 83.1
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.2e-42 174.5 93 77.4
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 5.5e-42 174.1 93 77.4
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 7.2e-42 173.7 92 77.2
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 7.2e-42 173.7 93 76.3
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 7.2e-42 173.7 95 76.8
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.6e-41 172.6 90 82.2
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.6e-41 172.6 90 82.2
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 1.6e-41 172.6 92 75.0
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 2.7e-41 171.8 92 75.0
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 2.7e-41 171.8 98 73.5
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 2.7e-41 171.8 89 83.1
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 3.6e-41 171.4 93 79.6
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 3.6e-41 171.4 98 76.5
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 4.7e-41 171.0 93 76.3
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 8.0e-41 170.2 92 77.2
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 1.4e-40 169.5 92 79.3
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 1.8e-40 169.1 92 76.1
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.3e-40 168.7 92 78.3
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 2.3e-40 168.7 92 78.3
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 2.3e-40 168.7 95 75.8
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 4.0e-40 167.9 90 75.6
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 8.8e-40 166.8 103 71.8
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 2.0e-39 165.6 117 63.2
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 2.6e-39 165.2 89 76.4
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 2.6e-39 165.2 89 76.4
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 3.3e-39 164.9 99 75.8
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 7.5e-39 163.7 91 76.9
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 7.5e-39 163.7 91 76.9
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 9.7e-39 163.3 91 73.6
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 9.7e-39 163.3 91 76.9
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 9.7e-39 163.3 97 73.2
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 1.7e-38 162.5 89 77.5
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 1.7e-38 162.5 89 77.5
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 1.7e-38 162.5 89 77.5
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 3.7e-38 161.4 89 76.4
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 3.7e-38 161.4 89 76.4
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 3.7e-38 161.4 89 76.4
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 3.7e-38 161.4 89 76.4
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 3.7e-38 161.4 89 76.4
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 4.8e-38 161.0 89 76.4
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 6.3e-38 160.6 81 84.0
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 6.3e-38 160.6 93 75.3
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 6.3e-38 160.6 89 77.5
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 1.8e-37 159.1 78 84.6
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 4.1e-37 157.9 89 76.4
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 9.1e-37 156.8 87 78.2
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 2.0e-36 155.6 91 75.8
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 3.5e-36 154.8 104 67.3
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 2.2e-35 152.1 93 68.8
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.4e-32 142.9 80 77.5
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.4e-32 142.9 78 79.5
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 9.8e-31 136.7 74 78.4
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 9.8e-31 136.7 69 84.1
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 6.3e-30 134.0 89 66.3
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 2.3e-27 125.6 64 79.7
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.5e-26 122.9 211 34.1
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 2.3e-24 115.5 61 85.2
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 8.9e-24 113.6 68 73.5
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 8.9e-24 113.6 61 80.3
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.3e-22 109.8 74 64.9
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 1.8e-16 89.4 68 55.9
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 6.8e-16 87.4 75 50.7
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 8.3e-14 80.5 61 59.0
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 4.3e-10 68.2 36 72.2
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 6.2e-09 64.3 57 47.4


User provided reference genes

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