Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.6e-119 432.2 237 100.0
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 6.0e-108 394.4 219 98.2
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 5.7e-98 361.3 223 90.1
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 7.0e-80 301.2 227 74.4
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 1.1e-69 267.3 223 70.0
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 6.8e-67 258.1 153 94.8
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 1.4e-51 207.2 225 55.1
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 1.3e-41 174.1 239 46.0
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 7.0e-40 168.3 235 43.8
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 7.0e-40 168.3 235 43.8
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 7.8e-39 164.9 235 44.3
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 1.5e-37 160.6 235 43.4
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 4.3e-37 159.1 235 43.0
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 5.6e-37 158.7 235 42.6
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 7.3e-37 158.3 237 43.0
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 1.2e-36 157.5 235 43.8
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 1.2e-36 157.5 233 42.9
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 1.6e-36 157.1 235 44.7
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 3.6e-36 156.0 232 42.7
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 6.2e-36 155.2 235 43.0
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 6.2e-36 155.2 235 43.4
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 8.0e-36 154.8 235 43.0
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 1.1e-35 154.5 235 40.4
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 1.8e-35 153.7 235 40.4
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 1.8e-35 153.7 235 42.1
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 1.8e-35 153.7 239 42.3
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 2.3e-35 153.3 236 42.8
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 3.1e-35 152.9 234 43.6
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 5.2e-35 152.1 235 41.3
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 8.9e-35 151.4 237 41.4
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 8.9e-35 151.4 235 42.1
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 2.0e-34 150.2 237 41.8
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 2.6e-34 149.8 235 43.0
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 4.4e-34 149.1 237 40.5
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 4.4e-34 149.1 235 40.0
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 4.4e-34 149.1 235 41.3
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 4.4e-34 149.1 232 43.1
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 5.8e-34 148.7 237 41.8
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 7.5e-34 148.3 235 39.6
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 7.5e-34 148.3 242 43.0
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 7.5e-34 148.3 240 39.2
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 1.7e-33 147.1 235 41.3
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 2.2e-33 146.7 224 41.5
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 2.2e-33 146.7 235 40.0
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 2.2e-33 146.7 233 40.3
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 2.2e-33 146.7 249 38.2
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 4.9e-33 145.6 235 38.3
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 4.9e-33 145.6 235 37.9
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 8.3e-33 144.8 235 40.4
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 1.4e-32 144.1 235 38.7
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.4e-32 144.1 237 41.8
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 1.9e-32 143.7 228 42.5
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 2.4e-32 143.3 233 41.6
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 3.2e-32 142.9 240 42.5
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 3.2e-32 142.9 235 38.7
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 4.1e-32 142.5 247 39.3
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 5.4e-32 142.1 286 36.4
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 9.2e-32 141.4 237 39.7
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 9.2e-32 141.4 250 40.4
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 2.1e-31 140.2 238 40.8
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 1.3e-30 137.5 221 37.6
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 6.6e-30 135.2 222 39.2
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 3.3e-29 132.9 235 37.4
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 4.3e-29 132.5 222 38.7
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 9.5e-29 131.3 233 39.5
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 2.8e-28 129.8 235 37.4
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 2.8e-28 129.8 214 40.7
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 5.2e-27 125.6 238 38.7
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 5.2e-27 125.6 127 53.5
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 5.8e-26 122.1 235 35.3
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 5.8e-26 122.1 235 38.3
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 2.9e-25 119.8 226 38.5
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 2.4e-24 116.7 233 33.9
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 2.1e-23 113.6 254 37.0
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 3.5e-23 112.8 230 37.0
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 7.8e-23 111.7 196 37.2
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 1.0e-22 111.3 235 35.7
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 8.6e-22 108.2 260 31.9
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 1.5e-21 107.5 224 32.1
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 1.5e-21 107.5 235 35.7
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 1.2e-20 104.4 185 37.3
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 1.4e-19 100.9 210 36.7
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 6.8e-19 98.6 192 37.5
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 8.4e-17 91.7 136 43.4
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 1.1e-16 91.3 155 41.9
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 1.1e-16 91.3 119 44.5
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 1.4e-16 90.9 137 46.0
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 8.7e-14 81.6 119 38.7
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 1.6e-12 77.4 110 45.5
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 2.1e-12 77.0 112 47.3
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.8e-11 73.9 115 42.6
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 5.8e-10 68.9 86 47.7
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 4.6e-07 59.3 248 25.4
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 8.7e-06 55.1 97 37.1


User provided reference genes

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