Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 5.7e-121 437.6 217 100.0
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 3.6e-107 391.7 217 89.9
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 1.4e-74 283.5 214 68.2
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 9.6e-52 207.6 166 63.9
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 1.4e-47 193.7 203 49.3
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 1.9e-47 193.4 212 46.2
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 4.6e-46 188.7 212 45.3
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 1.0e-45 187.6 160 53.8
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 2.3e-45 186.4 212 46.2
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 3.0e-45 186.0 208 47.1
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 1.9e-44 183.3 199 44.2
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 2.5e-44 183.0 217 47.0
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 4.3e-44 182.2 204 45.6
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 9.6e-44 181.0 212 43.4
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 1.6e-43 180.3 217 46.1
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 2.1e-43 179.9 209 45.5
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 3.6e-43 179.1 209 44.0
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 6.2e-43 178.3 161 50.3
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 8.1e-43 177.9 212 45.3
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 2.2e-40 169.9 205 43.4
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 2.9e-40 169.5 161 50.3
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 3.2e-39 166.0 193 45.1
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 3.2e-39 166.0 211 43.6
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 3.2e-39 166.0 197 45.2
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 5.5e-39 165.2 200 43.0
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 9.3e-39 164.5 214 42.5
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 1.6e-38 163.7 193 44.0
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 3.5e-38 162.5 201 43.8
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 7.9e-38 161.4 157 49.7
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 7.9e-38 161.4 215 41.9
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 1.0e-37 161.0 155 50.3
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 1.0e-37 161.0 161 48.4
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 1.8e-37 160.2 216 41.7
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 3.9e-37 159.1 201 43.3
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 8.7e-37 157.9 198 43.4
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 1.5e-36 157.1 194 42.8
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 1.6e-35 153.7 147 49.0
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 2.1e-35 153.3 206 40.3
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 2.8e-35 152.9 217 41.0
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 3.7e-35 152.5 213 39.9
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 4.8e-35 152.1 191 44.0
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 6.2e-35 151.8 158 46.8
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 1.4e-34 150.6 212 41.5
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 2.4e-34 149.8 199 42.2
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 3.1e-34 149.4 202 42.6
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 5.3e-34 148.7 209 39.2
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 9.0e-34 147.9 214 41.1
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.2e-33 147.5 167 45.5
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 2.0e-33 146.7 206 39.8
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 2.0e-33 146.7 169 44.4
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.4e-33 146.0 169 42.6
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 4.5e-33 145.6 153 46.4
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 2.9e-32 142.9 169 43.2
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 1.4e-31 140.6 166 43.4
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 1.4e-31 140.6 196 38.8
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 2.5e-31 139.8 161 44.1
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 1.6e-30 137.1 145 44.1
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 6.0e-30 135.2 167 40.7
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.0e-29 132.9 186 40.3
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 2.5e-28 129.8 194 37.6
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.8e-26 123.6 169 40.8
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 3.4e-25 119.4 144 42.4
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 4.5e-25 119.0 122 48.4
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 5.9e-25 118.6 184 40.2
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 2.9e-24 116.3 141 44.0
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 1.9e-23 113.6 135 46.7
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 5.5e-23 112.1 216 35.6
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 2.8e-19 99.8 125 41.6
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 1.8e-18 97.1 110 36.4
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 4.1e-18 95.9 113 42.5
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 3.6e-14 82.8 99 43.4
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 1.1e-10 71.2 212 26.4
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 5.3e-10 68.9 189 27.5
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 2.6e-09 66.6 134 28.4
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 2.6e-09 66.6 161 29.2
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 3.4e-09 66.2 161 29.2
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 3.4e-09 66.2 161 29.2
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 1.0e-08 64.7 148 29.7
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 1.7e-08 63.9 152 26.3
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 2.2e-08 63.5 134 29.9
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 2.2e-08 63.5 134 28.4
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 2.9e-08 63.2 177 25.4
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 5.0e-08 62.4 146 28.1
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 5.0e-08 62.4 160 27.5
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 5.0e-08 62.4 203 26.1
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 5.0e-08 62.4 184 26.6
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 1.4e-07 60.8 157 26.8
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 1.4e-07 60.8 141 30.5
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 1.4e-07 60.8 135 27.4
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 1.9e-07 60.5 154 25.3
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 2.5e-07 60.1 140 26.4
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 2.5e-07 60.1 82 39.0
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 2.5e-07 60.1 153 26.8
Psat6g096080 Pisum sativum HOM05D007054 ORTHO05D008888 2.5e-07 60.1 139 25.9
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 4.2e-07 59.3 178 24.7
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 4.2e-07 59.3 139 28.1
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 5.5e-07 58.9 135 24.4
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 5.5e-07 58.9 157 26.8
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 7.2e-07 58.5 140 26.4
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 9.4e-07 58.2 139 26.6
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 9.4e-07 58.2 139 28.1
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 1.2e-06 57.8 153 26.8
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 1.2e-06 57.8 139 26.6
Medtr1g034050 Medicago truncatula HOM05D007054 ORTHO05D008888 1.2e-06 57.8 134 25.4
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 1.6e-06 57.4 148 26.4
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 1.6e-06 57.4 135 25.9
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 2.1e-06 57.0 154 24.0
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 2.7e-06 56.6 135 23.7
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 2.7e-06 56.6 157 26.1
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 3.6e-06 56.2 140 26.4
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 3.6e-06 56.2 149 26.8
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 3.6e-06 56.2 151 27.8
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 3.6e-06 56.2 191 23.6
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 4.7e-06 55.8 135 23.7
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 6.1e-06 55.5 135 25.2
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 6.1e-06 55.5 173 26.0
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 7.9e-06 55.1 135 23.0


User provided reference genes

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