Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 4.0e-139 498.0 242 100.0
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 2.3e-118 429.1 219 95.9
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 5.8e-90 334.7 223 73.5
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 9.6e-85 317.4 167 91.0
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 1.3e-70 270.4 185 72.4
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 3.6e-39 166.0 220 42.7
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 3.0e-38 162.9 220 43.6
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.5e-37 160.6 227 44.1
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.5e-37 160.6 224 42.9
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.0e-37 160.2 219 42.0
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 2.0e-37 160.2 221 42.5
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 3.3e-37 159.5 219 42.0
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 3.3e-37 159.5 216 43.5
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 9.7e-37 157.9 219 41.6
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 3.7e-36 156.0 218 42.2
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 3.7e-36 156.0 221 42.1
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 4.8e-36 155.6 209 44.5
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 4.8e-36 155.6 213 43.7
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 6.3e-36 155.2 210 44.8
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 6.3e-36 155.2 218 43.1
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.1e-35 154.5 213 44.1
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 1.8e-35 153.7 213 44.1
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.4e-35 153.3 213 43.7
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 4.1e-35 152.5 221 43.4
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 4.1e-35 152.5 213 42.7
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 7.0e-35 151.8 233 39.1
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 9.1e-35 151.4 222 41.0
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 1.6e-34 150.6 220 42.7
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 2.0e-34 150.2 213 41.3
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 5.9e-34 148.7 223 40.8
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 7.7e-34 148.3 210 45.2
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 7.7e-34 148.3 222 39.2
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 1.0e-33 147.9 213 42.3
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 1.3e-33 147.5 219 40.6
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 1.7e-33 147.1 228 40.8
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.7e-33 147.1 224 41.1
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.7e-33 147.1 221 41.2
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 2.9e-33 146.4 224 40.6
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 3.8e-33 146.0 228 40.8
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 6.5e-33 145.2 221 44.3
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 8.5e-33 144.8 210 42.4
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 8.5e-33 144.8 210 42.4
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.1e-32 144.4 219 39.7
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 1.1e-32 144.4 219 37.9
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 1.5e-32 144.1 223 40.8
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.5e-32 143.3 224 40.6
AUR62037876 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.2e-32 142.9 92 77.2
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.2e-32 142.9 219 40.2
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 3.2e-32 142.9 219 39.7
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 9.4e-32 141.4 207 40.1
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 9.4e-32 141.4 207 40.1
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 9.4e-32 141.4 216 39.8
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.6e-31 140.6 216 40.7
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 1.6e-31 140.6 212 40.1
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 2.1e-31 140.2 221 39.8
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 2.7e-31 139.8 210 38.1
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 2.7e-31 139.8 221 40.7
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 3.6e-31 139.4 209 37.3
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 8.0e-31 138.3 211 40.3
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 2.3e-30 136.7 209 37.3
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 4.0e-30 136.0 218 39.0
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 5.2e-30 135.6 213 38.5
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 8.8e-30 134.8 210 37.6
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 2.0e-29 133.7 213 39.9
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 4.4e-29 132.5 189 40.2
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 7.5e-29 131.7 219 35.6
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 7.5e-29 131.7 209 36.8
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 9.7e-29 131.3 204 41.2
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 9.7e-29 131.3 208 38.5
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.3e-28 131.0 203 38.9
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.3e-28 131.0 203 38.9
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 2.8e-28 129.8 221 36.7
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 2.8e-28 129.8 219 41.1
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 6.3e-28 128.6 214 39.3
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 6.3e-28 128.6 219 36.5
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 8.2e-28 128.3 224 34.8
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.4e-27 127.5 258 36.0
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 2.4e-27 126.7 218 37.2
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 3.1e-27 126.3 203 38.4
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 3.1e-27 126.3 215 40.9
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 3.1e-27 126.3 212 40.1
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 7.0e-27 125.2 219 36.1
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 9.1e-27 124.8 203 38.9
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 2.0e-26 123.6 203 38.4
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 2.0e-26 123.6 165 43.6
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 4.5e-26 122.5 213 39.9
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 5.9e-26 122.1 200 39.0
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 1.3e-25 120.9 226 34.5
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 2.2e-25 120.2 211 38.9
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 2.9e-25 119.8 219 34.7
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 3.8e-25 119.4 199 39.2
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 3.8e-25 119.4 212 36.3
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 1.5e-24 117.5 219 35.2
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 1.9e-24 117.1 218 35.3
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 1.2e-23 114.4 199 38.2
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 3.6e-23 112.8 201 37.3
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 6.1e-23 112.1 205 36.1
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 6.1e-23 112.1 211 33.2
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 6.1e-23 112.1 220 34.1
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.0e-22 111.3 208 35.6
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 1.0e-22 111.3 188 36.2
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 4.0e-22 109.4 216 32.4
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 8.8e-22 108.2 150 39.3
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 1.7e-20 104.0 221 31.2
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 2.2e-20 103.6 220 35.5
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 2.2e-20 103.6 203 35.0
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 3.1e-19 99.8 230 33.0
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 7.0e-19 98.6 200 37.5
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.0e-17 94.7 213 33.8
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 3.6e-15 86.3 160 30.0
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 4.7e-15 85.9 88 46.6
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 4.7e-15 85.9 88 46.6
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 1.0e-14 84.7 178 36.0
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.4e-14 84.3 221 30.8
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 8.8e-14 81.6 160 30.0
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 3.7e-12 76.3 164 35.4
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 5.4e-11 72.4 121 39.7
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 5.9e-10 68.9 180 29.4
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 1.6e-07 60.8 92 42.4
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 1.4e-06 57.8 214 26.6
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 2.3e-06 57.0 25 88.0


User provided reference genes

Program Settings