Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.6e-198 696.0 385 100.0
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 2.2e-192 675.6 385 90.6
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 7.4e-172 607.4 398 80.4
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.8e-162 576.2 334 82.3
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 6.3e-155 551.2 390 72.8
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 4.4e-140 501.9 332 71.7
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 1.3e-139 500.4 335 71.0
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 3.1e-138 495.7 332 71.7
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 5.3e-138 495.0 341 70.1
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 2.0e-137 493.0 327 71.9
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 3.5e-137 492.3 385 69.1
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 5.9e-137 491.5 329 69.9
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 5.9e-137 491.5 385 67.8
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 2.9e-136 489.2 343 68.2
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 6.5e-136 488.0 325 72.3
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 6.5e-136 488.0 329 70.5
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 1.1e-135 487.3 327 70.6
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.9e-135 486.5 328 70.1
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 1.9e-135 486.5 388 62.9
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 3.2e-135 485.7 326 69.3
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 5.5e-135 485.0 332 69.6
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 7.2e-135 484.6 331 69.8
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 2.1e-134 483.0 334 69.8
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.1e-134 483.0 335 69.3
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 2.7e-134 482.6 329 69.9
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 3.6e-134 482.3 334 68.6
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 4.7e-134 481.9 335 69.3
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 4.7e-134 481.9 335 69.3
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 4.7e-134 481.9 332 68.4
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 6.1e-134 481.5 336 67.3
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 8.0e-134 481.1 323 70.9
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 2.3e-133 479.6 327 69.7
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 2.3e-133 479.6 334 68.0
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 3.0e-133 479.2 327 69.4
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.0e-132 476.5 332 67.2
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 3.3e-132 475.7 325 69.2
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 3.3e-132 475.7 332 66.9
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 4.4e-132 475.3 333 66.7
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 1.3e-131 473.8 385 64.7
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 4.8e-131 471.9 295 78.3
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 6.3e-131 471.5 335 66.9
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 1.1e-130 470.7 396 60.6
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.1e-130 470.7 408 58.3
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 1.4e-130 470.3 321 67.9
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 1.4e-130 470.3 335 66.3
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.4e-130 470.3 402 60.2
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 1.8e-130 469.9 339 67.8
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 3.1e-130 469.2 333 68.8
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 3.1e-130 469.2 335 66.3
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 4.1e-130 468.8 333 67.6
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 5.3e-130 468.4 321 67.6
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 9.1e-130 467.6 333 67.3
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 9.1e-130 467.6 336 67.9
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 1.6e-129 466.8 321 68.2
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 2.0e-129 466.5 321 69.2
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 2.7e-129 466.1 323 69.3
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 2.7e-129 466.1 331 66.5
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 3.5e-129 465.7 334 67.7
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 4.5e-129 465.3 385 61.0
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 7.7e-129 464.5 324 67.6
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 1.0e-128 464.2 324 66.4
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.3e-128 463.8 334 66.5
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 2.2e-128 463.0 321 68.5
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 3.8e-128 462.2 324 66.0
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 3.8e-128 462.2 324 68.5
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 8.5e-128 461.1 331 65.3
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 1.5e-127 460.3 323 68.4
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.9e-127 459.9 332 66.9
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.5e-127 459.5 325 66.5
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.2e-127 459.1 311 69.5
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 4.2e-127 458.8 332 66.9
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 5.5e-127 458.4 331 66.2
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 5.5e-127 458.4 326 66.3
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 7.2e-127 458.0 332 66.6
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 9.4e-127 457.6 333 67.3
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.6e-126 456.8 330 66.1
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 4.7e-126 455.3 326 67.8
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 8.0e-126 454.5 334 65.9
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 8.0e-126 454.5 334 65.9
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 1.4e-125 453.8 325 66.8
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 1.8e-125 453.4 323 65.9
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 2.3e-125 453.0 322 65.5
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 3.0e-125 452.6 331 65.0
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 3.0e-125 452.6 331 65.0
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 8.8e-125 451.1 333 63.7
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 1.5e-124 450.3 339 64.9
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 3.4e-124 449.1 343 65.6
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 2.8e-123 446.0 326 66.0
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 4.8e-123 445.3 312 67.0
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 8.3e-123 444.5 322 66.1
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 1.9e-119 433.3 338 62.7
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 5.5e-119 431.8 322 62.7
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 9.5e-119 431.0 312 65.1
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 1.0e-117 427.6 445 51.0
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 1.4e-114 417.2 318 64.8
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 3.1e-114 416.0 323 62.8
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 2.6e-108 396.4 286 65.7
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 3.5e-105 386.0 350 56.6
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 1.1e-103 380.9 309 59.9
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 1.7e-99 367.1 268 67.5
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 2.3e-96 356.7 321 54.2
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 6.6e-96 355.1 337 55.8
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.0e-92 343.6 248 66.5
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 2.6e-92 343.2 316 54.4
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.5e-87 326.6 313 50.5
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 3.3e-87 326.2 313 50.8
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 2.4e-85 320.1 231 67.1
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 5.9e-36 156.0 99 68.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 1.4e-32 144.8 397 31.2
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 3.0e-32 143.7 93 71.0
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 4.7e-25 119.8 68 75.0
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 1.6e-20 104.8 77 59.7
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 5.9e-20 102.8 65 70.8
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.0e-16 92.0 50 84.0
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.8e-16 91.3 63 71.4
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.7e-14 84.7 71 52.1
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 3.6e-09 67.0 53 56.6
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 1.3e-06 58.5 128 32.0


User provided reference genes

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