Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.8e-163 578.6 299 100.0
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.7e-128 463.0 356 73.6
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 1.1e-119 433.7 298 75.8
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 5.5e-106 388.3 360 60.6
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 1.0e-67 261.2 353 42.8
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 2.1e-65 253.4 335 45.7
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 8.2e-62 241.5 358 42.7
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 2.4e-61 240.0 353 43.1
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 4.5e-60 235.7 333 41.7
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 2.2e-59 233.4 351 42.5
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 3.2e-58 229.6 358 41.3
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 3.2e-58 229.6 345 42.6
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 7.2e-58 228.4 351 40.5
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.2e-57 227.6 351 40.5
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 1.2e-57 227.6 332 41.6
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 1.4e-56 224.2 351 41.6
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.4e-56 224.2 351 41.6
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 1.2e-55 221.1 354 39.8
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 1.2e-55 221.1 331 41.4
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 1.5e-55 220.7 342 40.4
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.5e-55 220.7 351 41.3
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 1.5e-55 220.7 344 40.7
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 5.7e-55 218.8 353 39.1
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 9.8e-55 218.0 350 40.0
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.3e-54 217.6 329 42.2
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 2.2e-54 216.9 344 38.4
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 3.7e-54 216.1 335 40.3
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 1.1e-53 214.5 349 39.5
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 1.4e-53 214.2 377 37.1
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 4.1e-53 212.6 351 39.6
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 7.0e-53 211.8 379 38.3
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 7.0e-53 211.8 335 39.7
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 1.2e-52 211.1 335 40.3
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 1.6e-52 210.7 341 40.8
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 1.6e-52 210.7 335 40.0
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 1.6e-52 210.7 354 37.9
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 2.0e-52 210.3 331 39.9
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 2.0e-52 210.3 336 39.0
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 2.7e-52 209.9 333 39.3
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 7.7e-52 208.4 347 38.3
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 1.0e-51 208.0 347 38.9
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 1.0e-51 208.0 335 39.1
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.7e-51 207.2 323 40.6
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 2.3e-51 206.8 353 37.1
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 2.3e-51 206.8 336 39.3
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 2.3e-51 206.8 336 39.0
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 2.9e-51 206.5 348 38.2
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 5.0e-51 205.7 350 39.1
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 5.0e-51 205.7 350 39.1
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 8.6e-51 204.9 384 37.0
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 1.1e-50 204.5 332 40.7
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 1.5e-50 204.1 347 39.2
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 1.5e-50 204.1 347 39.2
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 1.5e-50 204.1 345 36.8
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 1.9e-50 203.8 333 40.2
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 7.2e-50 201.8 348 37.1
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 7.2e-50 201.8 366 36.9
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 9.5e-50 201.4 349 38.4
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 1.2e-49 201.1 336 40.5
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 1.2e-49 201.1 330 37.9
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 2.1e-49 200.3 348 39.1
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 4.7e-49 199.1 339 36.6
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 6.1e-49 198.7 338 37.6
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 8.0e-49 198.4 343 38.2
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 1.4e-48 197.6 329 38.6
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 8.9e-48 194.9 338 38.2
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 2.0e-47 193.7 333 35.7
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 5.7e-47 192.2 338 36.7
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 2.8e-46 189.9 338 36.4
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 2.8e-46 189.9 340 36.2
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 3.7e-46 189.5 333 36.6
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 1.1e-45 188.0 370 34.6
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 2.4e-45 186.8 361 37.7
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 4.1e-45 186.0 329 35.9
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 5.4e-45 185.7 359 34.8
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 7.0e-45 185.3 422 34.4
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.2e-44 184.5 339 35.4
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 2.0e-44 183.7 331 36.9
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 4.5e-44 182.6 338 35.5
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 5.9e-44 182.2 334 38.3
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 2.9e-43 179.9 340 35.6
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 3.9e-43 179.5 428 32.5
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 8.6e-43 178.3 327 37.9
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.2e-40 169.1 385 34.3
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 1.6e-36 157.5 128 61.7
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 2.3e-35 153.7 174 50.0
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 1.1e-34 151.4 217 42.4
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 5.6e-34 149.1 372 29.6
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 1.2e-33 147.9 282 35.5
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 2.3e-32 143.7 166 49.4
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-31 140.6 316 32.3
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 2.0e-31 140.6 287 36.2
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 2.6e-31 140.2 120 56.7
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 1.1e-29 134.8 122 56.6
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 3.2e-29 133.3 353 26.9
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 9.2e-29 131.7 331 30.8
Hund18750 Selenicereus undatus HOM05D005062 ORTHO05D006410 1.6e-28 131.0 96 67.7
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 3.5e-28 129.8 143 46.9
Thecc.10G106400 Theobroma cacao HOM05D005062 ORTHO05D006410 3.9e-27 126.3 248 34.7
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 8.6e-27 125.2 189 43.4
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 1.9e-26 124.0 163 42.3
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 2.8e-25 120.2 202 39.1
Gohir.D12G091480 Gossypium hirsutum HOM05D005062 ORTHO05D006410 6.2e-25 119.0 247 34.8
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 1.2e-23 114.8 319 29.2
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 1.1e-21 108.2 108 51.9
SMO347G0520 Selaginella moellendorffii HOM05D005062 ORTHO05D006410 1.4e-21 107.8 311 31.2
Haze_23393 Corylus avellana HOM05D005062 ORTHO05D006410 7.1e-21 105.5 97 52.6
Zm00001eb242730 Zea mays HOM05D005062 ORTHO05D006410 2.1e-20 104.0 227 33.5
AagrBONN_evm.TU.Sc2ySwM_117.1142 Anthoceros agrestis HOM05D005062 ORTHO05D006410 1.3e-19 101.3 266 28.9
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 1.7e-19 100.9 99 53.5
Ciclev10032297m.g Citrus clementina HOM05D005062 ORTHO05D006410 1.1e-18 98.2 217 31.8
QL01p012462 Quercus lobata HOM05D005062 ORTHO05D006410 1.1e-18 98.2 105 50.5
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 1.5e-18 97.8 100 54.0
Prupe.2G079400 Prunus persica HOM05D005062 ORTHO05D006410 1.1e-16 91.7 151 41.1
Zm00001eb296300 Zea mays HOM05D005062 ORTHO05D006410 1.1e-16 91.7 160 40.6
Haze_02485 Corylus avellana HOM05D005062 ORTHO05D006410 1.2e-15 88.2 94 47.9
Carub.0005s2291 Capsella rubella HOM05D005062 ORTHO05D006410 2.6e-15 87.0 209 34.4
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 2.6e-15 87.0 108 47.2
MD02G1256100 Malus domestica HOM05D005062 ORTHO05D006410 1.3e-14 84.7 151 37.7
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 6.4e-14 82.4 100 42.0
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 1.9e-13 80.9 182 36.3
SEGI_26426 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 3.2e-13 80.1 73 52.1
Lj3C928T13 Lonicera japonica HOM05D005062 ORTHO05D006410 4.2e-13 79.7 74 51.4
Dinv42565 Davidia involucrata HOM05D005062 ORTHO05D006410 1.2e-12 78.2 92 43.5
Sc20g0001180 Simmondsia chinensis HOM05D003607 ORTHO05D004049 1.2e-12 78.2 160 32.5
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-12 76.3 58 60.3
ClCG02G008710 Citrullus lanatus HOM05D005062 ORTHO05D006410 2.3e-11 73.9 78 46.2
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 3.3e-10 70.1 42 76.2
Pp3c3_30210 Physcomitrium patens HOM05D005062 ORTHO05D006410 7.3e-10 68.9 72 44.4
RcHm_v2.0_Chr1g0332551 Rosa chinensis HOM05D005062 ORTHO05D006410 7.3e-10 68.9 62 51.6
Cre09.g395700 Chlamydomonas reinhardtii HOM05D005062 ORTHO05D006410 2.8e-09 67.0 160 30.6
Ca_00262_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 8.1e-09 65.5 81 40.7
Psat6g129760 Pisum sativum HOM05D005062 ORTHO05D006410 8.1e-09 65.5 81 40.7
Hma1.2p1_0165F.1_g073310 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 3.1e-08 63.5 66 43.9
Hma1.2p1_1068F.1_g253985 Hydrangea macrophylla HOM05D005062 ORTHO05D006410 6.9e-08 62.4 59 47.5
SEGI_13629 Sequoiadendron giganteum HOM05D005062 ORTHO05D006410 3.4e-07 60.1 58 51.7
PRCOL_00003606 Prasinoderma coloniale HOM05D005062 ORTHO05D006410 9.9e-07 58.5 338 20.7
COL.COLO4_24556 Corchorus olitorius HOM05D005062 ORTHO05D006410 2.9e-06 57.0 58 44.8
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 3.8e-06 56.6 83 36.1


User provided reference genes

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