Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.6e-255 884.8 422 100.0
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.8e-240 835.5 410 97.1
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 1.2e-220 769.6 422 84.1
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 2.0e-202 709.1 424 77.4
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 4.4e-202 708.0 424 77.6
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 2.2e-201 705.7 424 75.9
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 4.9e-201 704.5 424 76.9
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 8.3e-201 703.7 425 75.5
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 4.1e-200 701.4 424 76.7
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 9.2e-200 700.3 424 74.8
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 9.2e-200 700.3 425 75.8
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 1.2e-199 699.9 425 75.5
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 3.5e-199 698.4 427 74.7
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 1.7e-198 696.0 424 75.2
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.1e-197 693.3 424 75.0
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 1.9e-197 692.6 420 75.5
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 7.3e-197 690.6 418 75.8
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.4e-195 686.4 424 73.8
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.8e-195 686.0 424 73.1
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 4.0e-195 684.9 424 73.8
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 5.2e-195 684.5 424 71.9
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 5.2e-195 684.5 424 71.9
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 3.4e-194 681.8 426 73.0
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 9.8e-194 680.2 423 73.3
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 2.2e-193 679.1 406 77.6
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 1.1e-192 676.8 404 75.5
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 1.4e-192 676.4 418 74.2
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 3.2e-192 675.2 421 73.2
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 3.2e-192 675.2 424 72.9
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 4.1e-192 674.9 424 73.1
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.2e-191 673.3 412 75.7
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 1.2e-191 673.3 413 73.8
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 2.0e-191 672.5 424 72.4
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 4.6e-191 671.4 425 72.5
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 5.9e-191 671.0 413 78.7
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 1.7e-190 669.5 424 71.7
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 3.9e-190 668.3 425 71.1
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 3.9e-190 668.3 424 71.0
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 3.9e-190 668.3 404 74.8
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 5.0e-190 667.9 424 71.7
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.5e-189 666.4 411 73.2
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 4.3e-189 664.8 418 71.5
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 9.5e-189 663.7 418 71.5
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.6e-188 662.9 412 73.3
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 3.6e-188 661.8 425 69.2
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 6.2e-188 661.0 424 71.0
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 8.0e-188 660.6 424 70.5
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 2.3e-187 659.1 424 70.8
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 3.1e-187 658.7 421 71.0
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 3.1e-187 658.7 424 71.5
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 3.1e-187 658.7 424 70.5
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 5.2e-187 657.9 424 71.5
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.2e-186 656.8 424 70.0
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.5e-186 656.4 424 70.0
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 7.5e-186 654.1 413 73.6
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 7.5e-186 654.1 424 71.0
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 9.8e-186 653.7 424 69.6
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 1.7e-185 652.9 424 69.8
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.7e-185 652.9 425 71.5
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 2.9e-185 652.1 418 71.3
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 6.4e-185 651.0 424 71.0
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 6.4e-185 651.0 425 71.8
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 8.3e-185 650.6 407 71.7
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.1e-184 650.2 425 71.8
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 1.9e-184 649.4 418 72.2
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 9.2e-184 647.1 450 67.1
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 1.2e-183 646.7 424 69.6
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 6.0e-183 644.4 422 71.6
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 2.3e-182 642.5 425 69.6
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 8.6e-182 640.6 406 70.9
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.1e-181 640.2 388 72.4
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 2.5e-181 639.0 422 69.9
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 2.1e-180 636.0 424 68.9
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 8.1e-180 634.0 424 69.3
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 5.2e-179 631.3 418 68.9
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.2e-178 630.2 424 68.4
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 9.9e-178 627.1 418 70.1
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 4.1e-176 621.7 407 68.6
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.1e-171 605.5 413 69.7
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 2.0e-170 602.8 413 68.5
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 4.4e-170 601.7 540 55.6
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 6.4e-169 597.8 435 63.7
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 4.6e-167 591.7 469 60.3
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.1e-164 582.8 449 62.8
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 2.4e-160 569.3 422 61.6
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 4.3e-157 558.5 313 82.1
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.5e-154 550.1 404 63.9
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 1.7e-153 546.6 423 63.6
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 7.1e-152 541.2 414 61.4
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 2.1e-151 539.7 374 66.3
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 4.8e-148 528.5 360 69.2
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.3e-142 510.4 313 73.8
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 1.5e-138 496.9 390 62.8
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 4.2e-128 462.2 424 55.7
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.1e-96 357.8 352 46.0
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 8.8e-94 348.2 214 72.9
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 4.0e-86 322.8 198 72.2
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 2.2e-84 317.0 205 70.7
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 2.4e-83 313.5 358 42.5
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 3.1e-83 313.2 347 41.2
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 2.8e-71 273.5 347 35.7
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 6.8e-62 242.3 279 41.2
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 3.8e-44 183.3 106 75.5
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 2.0e-37 161.0 103 67.0
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 1.1e-35 155.2 85 80.0
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 9.3e-35 152.1 106 63.2
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 9.3e-35 152.1 106 63.2
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 3.5e-34 150.2 103 63.1
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 1.3e-28 131.7 139 51.8
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.2e-12 77.8 49 71.4
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 6.5e-12 76.3 49 71.4
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.1e-11 75.5 50 68.0
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 6.7e-09 66.2 48 64.6
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 6.7e-09 66.2 45 64.4
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.7e-07 61.6 56 51.8


User provided reference genes

Program Settings