Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039124 Chenopodium quinoa HOM05D000079 ORTHO05D137633 7.8e-38 159.8 74 100.0
AUR62009466 Chenopodium quinoa HOM05D000079 ORTHO05D000211 1.7e-29 132.1 73 78.1
EL10Ac2g03853 Beta vulgaris HOM05D000079 ORTHO05D000211 2.2e-16 88.6 59 62.7
EL10Ac2g03850 Beta vulgaris HOM05D000079 ORTHO05D000211 8.4e-16 86.7 59 61.0
EL10Ac2g03841 Beta vulgaris HOM05D000079 ORTHO05D000211 1.1e-15 86.3 59 59.3
EL10Ac2g03848 Beta vulgaris HOM05D000079 ORTHO05D000211 3.2e-15 84.7 72 56.9
AUR62020711 Chenopodium quinoa HOM05D000079 ORTHO05D000211 3.4e-09 64.7 53 54.7
unitig_699.g19251 Utricularia gibba HOM05D000079 ORTHO05D000211 5.8e-09 63.9 61 44.3
MSTRG.9266 Avicennia marina HOM05D000079 ORTHO05D000211 2.2e-08 62.0 63 39.7
HanXRQChr05g0136361 Helianthus annuus HOM05D000079 ORTHO05D000211 2.2e-08 62.0 61 54.1
BcaB08g34840 Brassica carinata HOM05D000079 ORTHO05D000211 3.8e-08 61.2 60 45.0
BcaC01g02869 Brassica carinata HOM05D000079 ORTHO05D000211 3.8e-08 61.2 60 45.0
A06p33020 Brassica napus HOM05D000079 ORTHO05D000211 3.8e-08 61.2 60 45.0
C03p59460 Brassica napus HOM05D000079 ORTHO05D000211 3.8e-08 61.2 60 45.0
BolC3t18208H Brassica oleracea HOM05D000079 ORTHO05D000211 3.8e-08 61.2 60 45.0
BraA06t26233Z Brassica rapa HOM05D000079 ORTHO05D000211 3.8e-08 61.2 60 45.0
Medtr4g127650 Medicago truncatula HOM05D000079 ORTHO05D000211 3.8e-08 61.2 61 47.5
CANSAT11G0950 Cannabis sativa HOM05D000079 ORTHO05D000211 8.4e-08 60.1 61 44.3
Lsat_1_v5_gn_8_71541 Lactuca sativa HOM05D000079 ORTHO05D000211 8.4e-08 60.1 61 49.2
Aa31LG8G16100 Aethionema arabicum HOM05D000079 ORTHO05D000211 1.1e-07 59.7 53 50.9
Psat4g077600 Pisum sativum HOM05D000079 ORTHO05D000211 1.1e-07 59.7 74 39.2
Hma1.2p1_0314F.1_g121860 Hydrangea macrophylla HOM05D000079 ORTHO05D000211 1.4e-07 59.3 60 41.7
Hma1.2p1_0314F.1_g121865 Hydrangea macrophylla HOM05D000079 ORTHO05D000211 1.4e-07 59.3 60 41.7
Psat0s4042g0080 Pisum sativum HOM05D000079 ORTHO05D000211 1.4e-07 59.3 62 46.8
Potri.018G109900 Populus trichocarpa HOM05D000079 ORTHO05D000211 1.4e-07 59.3 61 42.6
CSS0026810 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D000211 1.9e-07 58.9 69 40.6
ECA236G1146 Erigeron canadensis HOM05D000079 ORTHO05D000211 1.9e-07 58.9 54 46.3
Hma1.2p1_0661F.1_g198040 Hydrangea macrophylla HOM05D000079 ORTHO05D000211 2.5e-07 58.5 60 41.7
Solyc07g015960.1 Solanum lycopersicum HOM05D000079 ORTHO05D000211 2.5e-07 58.5 81 39.5
PGSC0003DMG400037355 Solanum tuberosum HOM05D000079 ORTHO05D000211 2.5e-07 58.5 81 39.5
TWI75G0717 Tripterygium wilfordii HOM05D000079 ORTHO05D000211 2.5e-07 58.5 61 42.6
CSS0007718 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D000211 3.2e-07 58.2 66 40.9
Ca_21244_v3 Cicer arietinum L. HOM05D000079 ORTHO05D000211 3.2e-07 58.2 61 45.9
FvH4_5g22390 Fragaria vesca HOM05D000079 ORTHO05D000211 3.2e-07 58.2 61 49.2
FAN08G2120 Fragaria x ananassa HOM05D000079 ORTHO05D000211 3.2e-07 58.2 61 49.2
FAN18G1852 Fragaria x ananassa HOM05D000079 ORTHO05D000211 3.2e-07 58.2 61 49.2
FAN18G2947 Fragaria x ananassa HOM05D000079 ORTHO05D000211 3.2e-07 58.2 61 49.2
Potri.006G165200 Populus trichocarpa HOM05D000079 ORTHO05D000211 3.2e-07 58.2 61 42.6
RcHm_v2.0_Chr7g0210141 Rosa chinensis HOM05D000079 ORTHO05D000211 3.2e-07 58.2 61 49.2
Sabra18G0092900 Salix brachista HOM05D000079 ORTHO05D000211 3.2e-07 58.2 62 40.3
GSVIVG01010912001 Vitis vinifera HOM05D000079 ORTHO05D000211 3.2e-07 58.2 60 45.0
ECA234G2841 Erigeron canadensis HOM05D001787 ORTHO05D003488 4.2e-07 57.8 61 41.0
Atru.chr7.829 Acer truncatum HOM05D000079 ORTHO05D000211 5.5e-07 57.4 63 44.4
Thhalv10022690m.g Eutrema salsugineum HOM05D000079 ORTHO05D000211 5.5e-07 57.4 61 42.6
Lsat_1_v5_gn_5_83361 Lactuca sativa HOM05D000079 ORTHO05D000211 5.5e-07 57.4 61 42.6
Lj4g0002896 Lotus japonicus HOM05D000079 ORTHO05D000211 5.5e-07 57.4 61 45.9
Phvul.003G140550 Phaseolus vulgaris HOM05D000079 ORTHO05D000211 5.5e-07 57.4 62 45.2
Sc09g0009890 Simmondsia chinensis HOM05D000079 ORTHO05D000211 5.5e-07 57.4 54 44.4
Sopen07g005790 Solanum pennellii HOM05D000079 ORTHO05D000211 5.5e-07 57.4 81 38.3
Sopen07g005810 Solanum pennellii HOM05D000079 ORTHO05D000211 5.5e-07 57.4 81 38.3
Migut.B00846 Erythranthe guttata HOM05D000079 ORTHO05D000211 7.1e-07 57.0 71 43.7
Prupe.1G079800 Prunus persica HOM05D000079 ORTHO05D000211 7.1e-07 57.0 60 43.3
THA.LOC104819970 Tarenaya hassleriana HOM05D000079 ORTHO05D000211 7.1e-07 57.0 61 45.9
Ah.04g150100 Amaranthus hybridus HOM05D000079 ORTHO05D000211 9.3e-07 56.6 61 39.3
EL10Ac3g07370 Beta vulgaris HOM05D000079 ORTHO05D000211 9.3e-07 56.6 61 41.0
CSS0045346 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D000211 9.3e-07 56.6 69 40.6
Ciclev10008265m.g Citrus clementina HOM05D000079 ORTHO05D000211 9.3e-07 56.6 61 41.0
FAN13G1957 Fragaria x ananassa HOM05D000079 ORTHO05D000211 9.3e-07 56.6 61 49.2
QL11p004882 Quercus lobata HOM05D000079 ORTHO05D000211 9.3e-07 56.6 61 45.9
AUR62020975 Chenopodium quinoa HOM05D000079 ORTHO05D000211 1.2e-06 56.2 61 39.3
AUR62043197 Chenopodium quinoa HOM05D000079 ORTHO05D000211 1.2e-06 56.2 61 41.0
HanXRQChr12g0359251 Helianthus annuus HOM05D000079 ORTHO05D000211 1.2e-06 56.2 61 42.6
Hma1.2p1_0284F.1_g113790 Hydrangea macrophylla HOM05D000079 ORTHO05D000211 1.2e-06 56.2 61 42.6
Medtr4g097090 Medicago truncatula HOM05D000079 ORTHO05D000211 1.2e-06 56.2 55 47.3
Nitab4.5_0000413g0070 Nicotiana tabacum HOM05D000079 ORTHO05D000211 1.2e-06 56.2 62 45.2
TPR.G5448 Trifolium pratense HOM05D000079 ORTHO05D000211 1.2e-06 56.2 60 43.3
Ah.09g234200 Amaranthus hybridus HOM05D000079 ORTHO05D000211 1.6e-06 55.8 61 41.0
Lj4g0006459 Lotus japonicus HOM05D000079 ORTHO05D000211 1.6e-06 55.8 61 42.6
Cfa013421 Carpinus fangiana HOM05D000079 ORTHO05D000211 2.1e-06 55.5 55 50.9
Cfa016696 Carpinus fangiana HOM05D000079 ORTHO05D000211 2.1e-06 55.5 56 37.5
MD16G1253400 Malus domestica HOM05D000079 ORTHO05D000211 2.1e-06 55.5 61 42.6
Nitab4.5_0005014g0010 Nicotiana tabacum HOM05D000079 ORTHO05D000211 2.1e-06 55.5 62 38.7
THA.LOC104814627 Tarenaya hassleriana HOM05D000079 ORTHO05D000211 2.1e-06 55.5 63 44.4
CiPaw.08G034300 Carya illinoinensis HOM05D000079 ORTHO05D000211 2.7e-06 55.1 60 38.3
Glyma.17G061000 Glycine max HOM05D000079 ORTHO05D000211 2.7e-06 55.1 61 44.3
Lalb_Chr12g0199501 Lupinus albus HOM05D000079 ORTHO05D000211 2.7e-06 55.1 81 43.2
AT2G19070 Arabidopsis thaliana HOM05D000079 ORTHO05D000211 3.5e-06 54.7 61 41.0
Eucgr.C02269 Eucalyptus grandis HOM05D000079 ORTHO05D000211 4.6e-06 54.3 77 40.3
Actinidia01619 Actinidia chinensis HOM05D000079 ORTHO05D000211 7.9e-06 53.5 60 36.7
AL3G52850 Arabidopsis lyrata HOM05D000079 ORTHO05D000211 7.9e-06 53.5 61 39.3
arahy.Tifrunner.gnm1.ann1.JKWD75 Arachis hypogaea HOM05D000079 ORTHO05D000211 7.9e-06 53.5 61 44.3
BcaB07g31625 Brassica carinata HOM05D000079 ORTHO05D000211 7.9e-06 53.5 60 40.0
Carub.0003s3331 Capsella rubella HOM05D000079 ORTHO05D000211 7.9e-06 53.5 61 39.3
Cfa016693 Carpinus fangiana HOM05D000079 ORTHO05D000211 7.9e-06 53.5 56 37.5
Peaxi162Scf00320g00051 Petunia axillaris HOM05D000079 ORTHO05D000211 7.9e-06 53.5 63 38.1


User provided reference genes

Program Settings