Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 5.2e-173 610.9 303 100.0
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 1.6e-92 343.6 269 69.1
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.6e-89 333.6 267 67.4
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 1.6e-89 333.6 268 67.2
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 4.7e-89 332.0 268 64.9
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 1.4e-88 330.5 268 66.0
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 1.8e-88 330.1 268 66.4
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.3e-88 329.7 268 65.3
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 2.3e-88 329.7 280 65.4
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 3.0e-88 329.3 268 66.4
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 6.8e-88 328.2 268 64.9
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 1.2e-87 327.4 270 65.6
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 1.5e-87 327.0 269 64.7
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.0e-87 326.6 268 65.7
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.0e-87 326.6 268 65.7
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 2.0e-87 326.6 170 95.3
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 5.7e-87 325.1 281 62.6
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 5.7e-87 325.1 268 65.3
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 7.5e-87 324.7 267 64.8
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 7.5e-87 324.7 268 65.3
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 7.5e-87 324.7 268 64.9
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 9.8e-87 324.3 269 66.2
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 9.8e-87 324.3 270 65.9
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 2.9e-86 322.8 269 65.1
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 3.7e-86 322.4 268 64.2
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 6.4e-86 321.6 269 64.3
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 6.4e-86 321.6 269 64.3
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 6.4e-86 321.6 274 66.1
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 8.3e-86 321.2 268 62.7
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 8.3e-86 321.2 268 63.4
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 8.3e-86 321.2 268 64.2
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.4e-85 320.5 268 64.2
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 3.2e-85 319.3 268 63.1
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 4.1e-85 318.9 268 64.9
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 5.4e-85 318.5 268 63.4
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 7.0e-85 318.2 268 64.2
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 7.0e-85 318.2 268 62.7
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 9.2e-85 317.8 269 63.2
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 9.2e-85 317.8 268 63.4
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 1.2e-84 317.4 268 62.7
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 1.6e-84 317.0 270 65.2
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.6e-84 317.0 268 63.4
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 4.6e-84 315.5 268 62.3
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 4.6e-84 315.5 269 63.9
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 5.9e-84 315.1 268 63.1
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 1.0e-83 314.3 268 62.3
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 1.0e-83 314.3 269 63.9
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 1.3e-83 313.9 268 61.9
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 1.7e-83 313.5 268 61.9
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 2.3e-83 313.2 274 60.6
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 2.3e-83 313.2 268 63.4
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 3.0e-83 312.8 268 61.2
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 3.9e-83 312.4 269 62.1
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 5.0e-83 312.0 271 63.5
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 8.6e-83 311.2 268 61.6
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 8.6e-83 311.2 269 62.5
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 8.6e-83 311.2 269 62.5
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 8.6e-83 311.2 274 63.5
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 1.1e-82 310.8 272 63.2
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 1.1e-82 310.8 271 63.1
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 1.5e-82 310.5 274 60.2
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 1.5e-82 310.5 268 62.7
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 1.5e-82 310.5 273 63.0
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 2.5e-82 309.7 267 62.9
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 2.5e-82 309.7 268 61.6
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 2.5e-82 309.7 272 62.9
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 3.3e-82 309.3 267 61.4
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 3.3e-82 309.3 277 59.9
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 4.3e-82 308.9 267 61.8
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 5.6e-82 308.5 269 61.7
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 7.3e-82 308.1 267 60.7
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 9.5e-82 307.8 267 61.0
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 1.2e-81 307.4 267 61.0
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 4.7e-81 305.4 274 61.7
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 6.2e-81 305.1 171 85.4
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 8.0e-81 304.7 171 84.2
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 1.1e-80 304.3 268 60.4
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.8e-80 303.5 290 59.7
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 2.3e-80 303.1 171 83.6
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 3.1e-80 302.8 268 60.4
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 4.0e-80 302.4 268 60.4
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 4.0e-80 302.4 171 84.2
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 4.0e-80 302.4 268 61.6
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 5.2e-80 302.0 171 83.0
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 5.2e-80 302.0 268 60.1
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 1.2e-79 300.8 171 83.0
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 2.0e-79 300.1 266 59.0
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 2.9e-78 296.2 271 62.7
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 1.4e-77 293.9 268 58.2
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 2.4e-77 293.1 271 62.0
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 5.4e-77 292.0 192 76.6
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 4.6e-76 288.9 244 64.3
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 1.2e-73 280.8 172 77.9
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 1.4e-72 277.3 244 61.9
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 1.8e-72 276.9 245 60.4
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 1.2e-71 274.2 139 96.4
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 4.9e-70 268.9 247 60.3
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 1.1e-69 267.7 269 56.9
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 9.2e-69 264.6 268 55.6
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 2.7e-68 263.1 268 55.2
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 3.5e-68 262.7 272 55.5
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 4.6e-68 262.3 268 52.2
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 6.0e-68 261.9 244 57.8
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 1.7e-67 260.4 277 56.7
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 3.9e-67 259.2 243 61.3
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 1.6e-65 253.8 171 76.0
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 2.1e-65 253.4 268 51.5
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 6.2e-65 251.9 140 85.7
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 1.8e-64 250.4 268 54.9
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 2.4e-64 250.0 468 37.6
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 4.0e-64 249.2 270 54.4
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 8.9e-64 248.1 269 55.0
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 9.9e-63 244.6 267 51.3
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 2.2e-62 243.4 267 50.9
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 3.9e-59 232.6 140 84.3
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 6.6e-59 231.9 170 65.9
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.4e-56 224.2 140 78.6
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 1.5e-55 220.7 269 51.3
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 5.8e-55 218.8 140 68.6
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 8.4e-54 214.9 268 48.9
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 7.1e-53 211.8 258 49.2
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 3.9e-51 206.1 154 68.2
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.5e-50 204.1 124 82.3
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 3.3e-50 203.0 268 46.3
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 4.8e-49 199.1 169 54.4
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 3.5e-44 183.0 354 40.1
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 3.9e-43 179.5 174 55.2
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 2.5e-42 176.8 170 50.0
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 2.4e-40 170.2 267 44.6
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 1.2e-39 167.9 207 51.2
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.3e-38 164.5 96 82.3
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 1.5e-34 151.0 84 88.1
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-30 136.3 91 75.8
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 8.4e-30 135.2 182 45.1
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 2.6e-23 113.6 154 47.4
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 1.8e-19 100.9 151 41.7
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.9e-18 97.4 63 69.8
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 1.3e-14 84.7 146 39.0


User provided reference genes

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