Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 1.1e-80 303.1 147 100.0
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 1.8e-73 279.3 147 91.8
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 8.7e-65 250.4 148 80.4
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 1.1e-62 243.4 119 96.6
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 5.5e-59 231.1 147 72.1
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 1.0e-57 226.9 148 70.3
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 1.4e-57 226.5 147 70.1
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 1.8e-57 226.1 148 72.3
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 3.0e-57 225.3 147 69.4
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 3.0e-57 225.3 148 69.6
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 5.1e-57 224.6 148 70.3
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 6.7e-57 224.2 148 70.9
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 1.9e-56 222.6 148 71.6
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 1.9e-56 222.6 148 70.9
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 3.3e-56 221.9 148 69.6
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 3.3e-56 221.9 148 69.6
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 3.3e-56 221.9 145 70.3
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 9.7e-56 220.3 148 68.9
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 9.7e-56 220.3 148 69.6
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.3e-55 219.9 148 68.9
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.3e-55 219.9 148 68.9
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 1.3e-55 219.9 147 69.4
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 1.7e-55 219.5 147 70.7
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 1.7e-55 219.5 148 71.6
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 2.2e-55 219.2 148 68.9
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 2.2e-55 219.2 148 68.9
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 2.8e-55 218.8 148 69.6
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 4.8e-55 218.0 147 68.0
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 6.3e-55 217.6 148 68.2
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 6.3e-55 217.6 148 68.9
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 1.1e-54 216.9 148 68.9
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.1e-54 216.9 144 69.4
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 1.1e-54 216.9 147 68.7
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.4e-54 216.5 145 66.2
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 1.4e-54 216.5 146 67.8
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 2.4e-54 215.7 148 68.9
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 2.4e-54 215.7 148 69.6
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 3.1e-54 215.3 148 67.6
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 9.1e-54 213.8 136 72.8
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 1.5e-53 213.0 147 66.0
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 1.5e-53 213.0 147 66.0
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.5e-53 213.0 145 65.5
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 2.0e-53 212.6 134 72.4
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 3.4e-53 211.8 145 67.6
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 3.4e-53 211.8 148 68.9
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 3.4e-53 211.8 168 62.5
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 4.5e-53 211.5 148 66.2
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 5.9e-53 211.1 148 65.5
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 5.9e-53 211.1 148 66.9
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 1.0e-52 210.3 172 58.7
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 1.3e-52 209.9 148 66.9
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.3e-52 209.9 172 58.7
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 2.2e-52 209.1 149 67.1
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 2.9e-52 208.8 149 68.5
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 3.8e-52 208.4 148 69.6
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 5.0e-52 208.0 148 65.5
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 6.5e-52 207.6 148 66.2
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 6.5e-52 207.6 148 65.5
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 1.1e-51 206.8 148 64.9
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 1.1e-51 206.8 148 65.5
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 1.4e-51 206.5 148 66.9
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 1.4e-51 206.5 148 64.9
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 2.5e-51 205.7 148 65.5
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 2.5e-51 205.7 149 66.4
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 2.5e-51 205.7 149 66.4
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 2.5e-51 205.7 148 64.9
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 2.5e-51 205.7 148 64.2
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 2.5e-51 205.7 148 63.5
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 2.5e-51 205.7 145 63.4
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 5.5e-51 204.5 149 65.8
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 7.2e-51 204.1 149 68.5
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 1.2e-50 203.4 148 62.8
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 2.7e-50 202.2 148 65.5
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 6.1e-50 201.1 151 62.3
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 2.3e-49 199.1 149 61.7
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 2.3e-49 199.1 154 64.3
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 3.0e-49 198.7 212 50.5
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 3.9e-49 198.4 149 64.4
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 1.1e-48 196.8 171 60.2
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 2.0e-48 196.1 145 61.4
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 4.4e-48 194.9 165 60.0
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 1.3e-47 193.4 145 60.7
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 1.7e-47 193.0 186 53.2
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 2.2e-47 192.6 144 60.4
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 1.8e-46 189.5 149 60.4
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 5.3e-46 188.0 124 70.2
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 2.6e-45 185.7 153 56.2
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 3.4e-45 185.3 173 52.0
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 2.2e-44 182.6 133 63.2
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 5.0e-44 181.4 148 56.1
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 6.5e-44 181.0 148 54.7
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 8.5e-44 180.6 145 57.2
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 1.9e-43 179.5 145 58.6
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 7.4e-40 167.5 104 78.8
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 1.8e-38 162.9 111 72.1
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 2.9e-36 155.6 119 59.7
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 1.9e-35 152.9 104 67.3
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 1.5e-27 126.7 94 59.6
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 9.4e-27 124.0 148 46.6
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.5e-24 116.7 82 67.1
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 1.1e-22 110.5 101 47.5
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 3.5e-21 105.5 145 33.8
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 2.5e-19 99.4 151 35.8
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 7.2e-19 97.8 103 52.4
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 5.2e-17 91.7 66 68.2
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 8.9e-17 90.9 127 44.1
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 4.9e-15 85.1 77 50.6
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 4.9e-15 85.1 66 60.6
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 8.3e-15 84.3 67 58.2
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 3.5e-13 79.0 145 31.0
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 2.3e-12 76.3 67 53.7
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 3.8e-12 75.5 45 73.3
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 4.3e-11 72.0 66 54.5
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 2.3e-09 66.2 38 73.7
Eucgr.E01843 Eucalyptus grandis HOM05D007311 ORTHO05D009011 2.4e-06 56.2 47 46.8


User provided reference genes

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