Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039062 Chenopodium quinoa HOM05D007211 ORTHO05D009060 1.3e-42 176.0 89 100.0
AUR62010326 Chenopodium quinoa HOM05D007211 ORTHO05D009060 3.2e-38 161.4 84 95.2
EL10Ac9g22259 Beta vulgaris HOM05D007211 ORTHO05D009060 4.4e-35 151.0 89 83.1
Hund00155 Selenicereus undatus HOM05D000364 ORTHO05D009060 3.1e-33 144.8 88 77.3
Sc14g0001880 Simmondsia chinensis HOM05D007211 ORTHO05D009060 5.5e-30 134.0 80 77.5
TPR.G21608 Trifolium pratense HOM05D007211 ORTHO05D009060 5.5e-30 134.0 82 74.4
Migut.B00396 Erythranthe guttata HOM05D007211 ORTHO05D009060 1.2e-29 132.9 86 73.3
Ca_24347_v3 Cicer arietinum L. HOM05D007211 ORTHO05D009060 1.6e-29 132.5 80 75.0
Oeu013758.1 Olea europaea HOM05D007211 ORTHO05D009060 3.6e-29 131.3 82 75.6
Psat4g228560 Pisum sativum HOM05D007211 ORTHO05D009060 3.6e-29 131.3 81 72.8
CSS0010427 Camellia sinensis var. sinensis HOM05D007211 ORTHO05D009060 8.0e-29 130.2 85 70.6
GSVIVG01037902001 Vitis vinifera HOM05D007211 ORTHO05D009060 8.0e-29 130.2 80 75.0
Gorai.013G048100 Gossypium raimondii HOM05D007211 ORTHO05D009060 1.0e-28 129.8 80 73.8
CSS0021869 Camellia sinensis var. sinensis HOM05D007211 ORTHO05D009060 1.4e-28 129.4 80 73.8
Medtr5g004970 Medicago truncatula HOM05D007211 ORTHO05D009060 1.4e-28 129.4 80 73.8
Oeu029529.1 Olea europaea HOM05D007211 ORTHO05D009060 1.4e-28 129.4 82 74.4
Actinidia34396 Actinidia chinensis HOM05D007211 ORTHO05D009060 1.8e-28 129.0 85 70.6
Ciclev10029710m.g Citrus clementina HOM05D007211 ORTHO05D009060 1.8e-28 129.0 80 75.0
Rhsim11G0158600 Rhododendron simsii HOM05D007211 ORTHO05D009060 1.8e-28 129.0 81 75.3
vmacro01995 Vaccinium macrocarpon HOM05D007211 ORTHO05D009060 1.8e-28 129.0 81 75.3
Cc02_g19360 Coffea canephora HOM05D007211 ORTHO05D009060 2.3e-28 128.6 80 76.2
Haze_10197 Corylus avellana HOM05D007211 ORTHO05D009060 2.3e-28 128.6 80 73.8
Lj1g0022136 Lotus japonicus HOM05D007211 ORTHO05D009060 2.3e-28 128.6 82 70.7
Sopen01g049710 Solanum pennellii HOM05D007211 ORTHO05D009060 2.3e-28 128.6 86 67.4
Gohir.A13G044300 Gossypium hirsutum HOM05D007211 ORTHO05D009060 4.0e-28 127.9 80 72.5
Thecc.02G110400 Theobroma cacao HOM05D007211 ORTHO05D009060 4.0e-28 127.9 80 73.8
arahy.Tifrunner.gnm1.ann1.0PG00T Arachis hypogaea HOM05D007211 ORTHO05D009060 6.7e-28 127.1 80 70.0
arahy.Tifrunner.gnm1.ann1.UEWU3Q Arachis hypogaea HOM05D007211 ORTHO05D009060 6.7e-28 127.1 80 70.0
arahy.Tifrunner.gnm1.ann1.YF4EPK Arachis hypogaea HOM05D007211 ORTHO05D009060 6.7e-28 127.1 80 70.0
Nitab4.5_0001480g0150 Nicotiana tabacum HOM05D007211 ORTHO05D009060 6.7e-28 127.1 88 64.8
QL11p032854 Quercus lobata HOM05D007211 ORTHO05D009060 6.7e-28 127.1 80 72.5
CiPaw.06G168700 Carya illinoinensis HOM05D007211 ORTHO05D009060 8.8e-28 126.7 80 72.5
Hma1.2p1_1518F.1_g288450 Hydrangea macrophylla HOM05D007211 ORTHO05D009060 8.8e-28 126.7 80 75.0
Rhsim11G0157000 Rhododendron simsii HOM05D007211 ORTHO05D009060 8.8e-28 126.7 81 74.1
Eucgr.I01095 Eucalyptus grandis HOM05D007211 ORTHO05D009060 1.2e-27 126.3 80 71.2
PGSC0003DMG400025763 Solanum tuberosum HOM05D007211 ORTHO05D009060 1.2e-27 126.3 81 71.6
unitig_0.g876 Utricularia gibba HOM05D007211 ORTHO05D009060 1.2e-27 126.3 80 76.2
Prupe.8G136900 Prunus persica HOM05D007211 ORTHO05D009060 1.5e-27 125.9 81 71.6
Gohir.D13G043400 Gossypium hirsutum HOM05D007211 ORTHO05D009060 2.0e-27 125.6 80 71.2
ClCG05G010330 Citrullus lanatus HOM05D007211 ORTHO05D009060 2.6e-27 125.2 80 72.5
Duzib248G0207 Durio zibethinus HOM05D007211 ORTHO05D009060 3.3e-27 124.8 80 71.2
MELO3C019551.2 Cucumis melo HOM05D007211 ORTHO05D009060 4.4e-27 124.4 80 71.2
COL.COLO4_32576 Corchorus olitorius HOM05D007211 ORTHO05D009060 5.7e-27 124.0 80 71.2
RcHm_v2.0_Chr6g0254661 Rosa chinensis HOM05D007211 ORTHO05D009060 5.7e-27 124.0 81 70.4
Atru.chr5.2471 Acer truncatum HOM05D007211 ORTHO05D009060 7.5e-27 123.6 80 70.0
RcHm_v2.0_Chr6g0254711 Rosa chinensis HOM05D007211 ORTHO05D009060 7.5e-27 123.6 81 70.4
TAR376G0209 Trochodendron aralioides HOM05D007211 ORTHO05D009060 7.5e-27 123.6 81 69.1
Aqoxy6G02839 Aquilegia oxysepala HOM05D007211 ORTHO05D009060 1.7e-26 122.5 81 67.9
Cpa.g.sc106.108 Carica papaya HOM05D007211 ORTHO05D009060 1.7e-26 122.5 80 71.2
Lsat_1_v5_gn_9_112060 Lactuca sativa HOM05D007211 ORTHO05D009060 2.2e-26 122.1 80 71.2
CsaV3_3G018160 Cucumis sativus L. HOM05D007211 ORTHO05D009060 2.8e-26 121.7 80 68.8
Nn1g04662 Nelumbo nucifera HOM05D007211 ORTHO05D009060 2.8e-26 121.7 80 67.5
DCAR_029091 Daucus carota HOM05D007211 ORTHO05D009060 4.8e-26 120.9 80 71.2
Glyma.01G243800 Glycine max HOM05D007211 ORTHO05D009060 1.1e-25 119.8 82 67.1
MD00G1109400 Malus domestica HOM05D007211 ORTHO05D009060 1.1e-25 119.8 81 67.9
MD04G1005100 Malus domestica HOM05D007211 ORTHO05D009060 1.1e-25 119.8 81 67.9
Manes.10G075811 Manihot esculenta HOM05D007211 ORTHO05D009060 1.1e-25 119.8 80 68.8
Manes.10G076037 Manihot esculenta HOM05D007211 ORTHO05D009060 1.1e-25 119.8 80 68.8
TWI79G1551 Tripterygium wilfordii HOM05D007211 ORTHO05D009060 1.1e-25 119.8 80 63.8
FvH4_2g04840 Fragaria vesca HOM05D007211 ORTHO05D009060 1.4e-25 119.4 81 67.9
FAN15G0614 Fragaria x ananassa HOM05D000062 ORTHO05D000043 1.4e-25 119.4 81 67.9
FAN24G1282 Fragaria x ananassa HOM05D000062 ORTHO05D000043 1.4e-25 119.4 82 67.1
CANSAT25G1462 Cannabis sativa HOM05D007211 ORTHO05D009060 1.8e-25 119.0 80 67.5
CANSAT25G3598 Cannabis sativa HOM05D007211 ORTHO05D009060 1.8e-25 119.0 80 67.5
MD05G1023600 Malus domestica HOM05D007211 ORTHO05D009060 1.8e-25 119.0 82 68.3
Potri.001G299200 Populus trichocarpa HOM05D007211 ORTHO05D009060 1.8e-25 119.0 80 67.5
Sabra09G0072500 Salix brachista HOM05D007211 ORTHO05D009060 1.8e-25 119.0 80 68.8
Sed0014592 Sechium edule HOM05D007211 ORTHO05D009060 3.1e-25 118.2 80 65.0
Potri.009G094200 Populus trichocarpa HOM05D007211 ORTHO05D009060 4.1e-25 117.9 80 68.8
PGR142G3039 Punica granatum HOM05D007211 ORTHO05D009060 4.1e-25 117.9 80 65.0
TWI31G1006 Tripterygium wilfordii HOM05D007211 ORTHO05D009060 4.1e-25 117.9 80 65.0
HanXRQChr03g0068751 Helianthus annuus HOM05D007211 ORTHO05D009060 5.3e-25 117.5 80 70.0
PSO541G5220 Papaver somniferum HOM05D007211 ORTHO05D009060 7.0e-25 117.1 82 65.9
FAN27G1079 Fragaria x ananassa HOM05D007211 ORTHO05D009060 1.6e-24 115.9 81 66.7
Lalb_Chr09g0319591 Lupinus albus HOM05D007211 ORTHO05D009060 1.6e-24 115.9 81 67.9
ECA240G2095 Erigeron canadensis HOM05D007211 ORTHO05D009060 2.0e-24 115.5 80 66.2
Phvul.002G053100 Phaseolus vulgaris HOM05D007211 ORTHO05D009060 7.7e-24 113.6 82 64.6
Aa31LG8G6260 Aethionema arabicum HOM05D007211 ORTHO05D009060 8.5e-23 110.2 80 65.0
CAN.G606.15 Capsicum annuum HOM05D007211 ORTHO05D009060 8.5e-23 110.2 70 74.3
AL3G32910 Arabidopsis lyrata HOM05D007211 ORTHO05D009060 1.1e-22 109.8 80 65.0
BcaC05g28470 Brassica carinata HOM05D007211 ORTHO05D009060 1.1e-22 109.8 80 63.8
BcaC09g48910 Brassica carinata HOM05D002228 ORTHO05D002347 1.1e-22 109.8 81 63.0
BolC5t33279H Brassica oleracea HOM05D007211 ORTHO05D009060 1.1e-22 109.8 80 63.8
CARHR094930 Cardamine hirsuta HOM05D007211 ORTHO05D009060 1.1e-22 109.8 80 63.8
A05p30110 Brassica napus HOM05D002228 ORTHO05D002347 1.5e-22 109.4 81 63.0
BraA05t21851Z Brassica rapa HOM05D002228 ORTHO05D002347 1.5e-22 109.4 81 63.0
BcaC09g48904 Brassica carinata HOM05D007211 ORTHO05D009060 1.9e-22 109.0 80 63.8
A01p35210 Brassica napus HOM05D007211 ORTHO05D009060 1.9e-22 109.0 80 63.8
C05p45540 Brassica napus HOM05D007211 ORTHO05D009060 1.9e-22 109.0 80 63.8
BraA01t03602Z Brassica rapa HOM05D007211 ORTHO05D009060 1.9e-22 109.0 80 63.8
Carub.0003s1931 Capsella rubella HOM05D007211 ORTHO05D009060 1.9e-22 109.0 81 63.0
Sp3g17560 Schrenkiella parvula HOM05D007211 ORTHO05D009060 2.5e-22 108.6 80 62.5
C01p44630 Brassica napus HOM05D007211 ORTHO05D009060 4.2e-22 107.8 80 62.5
BolC1t04431H Brassica oleracea HOM05D007211 ORTHO05D009060 4.2e-22 107.8 80 62.5
AT3G19508 Arabidopsis thaliana HOM05D007211 ORTHO05D009060 5.5e-22 107.5 80 62.5
Nitab4.5_0004326g0030 Nicotiana tabacum HOM05D007211 ORTHO05D009060 7.2e-22 107.1 71 67.6
BcaB06g26010 Brassica carinata HOM05D007211 ORTHO05D009060 1.2e-21 106.3 80 62.5
Cfa004601 Carpinus fangiana HOM05D007211 ORTHO05D009060 1.0e-20 103.2 80 57.5
Os01g0342800 Oryza sativa ssp. japonica HOM05D007211 ORTHO05D009060 5.7e-19 97.4 80 62.5
MD10G1099000 Malus domestica HOM05D007211 ORTHO05D009060 7.5e-19 97.1 69 66.7
CDE07G1397 Ceratophyllum demersum HOM05D007211 ORTHO05D009060 2.2e-18 95.5 81 58.0
Zm00001eb307960 Zea mays HOM05D007211 ORTHO05D009060 7.0e-17 90.5 76 60.5
BcaB04g20701 Brassica carinata HOM05D002228 ORTHO05D002347 2.0e-16 89.0 90 51.1
AagrBONN_evm.TU.Sc2ySwM_362.2090 Anthoceros agrestis HOM05D007211 ORTHO05D009060 5.9e-16 87.4 80 55.0
AagrBONN_evm.TU.Sc2ySwM_362.1547 Anthoceros agrestis HOM05D007211 ORTHO05D009060 3.8e-15 84.7 80 53.8
BcaC09g48905 Brassica carinata HOM05D007211 ORTHO05D009060 5.0e-15 84.3 84 52.4
Sabra16G0187800 Salix brachista HOM05D007211 ORTHO05D009060 2.5e-14 82.0 56 67.9
BcaC09g48902 Brassica carinata HOM05D007211 ORTHO05D009060 4.2e-14 81.3 105 42.9
MBI16_g16358_MAGBIO Magnolia biondii HOM05D007211 ORTHO05D009060 4.2e-14 81.3 61 62.3
BcaC09g48907 Brassica carinata HOM05D007211 ORTHO05D009060 7.5e-11 70.5 59 59.3
Pp3c17_14820 Physcomitrium patens HOM05D007211 ORTHO05D009060 1.1e-09 66.6 64 53.1
CBR_g972 Chara braunii HOM05D007211 ORTHO05D009060 4.1e-09 64.7 77 41.6
AagrBONN_evm.TU.Sc2ySwM_344.3864 Anthoceros agrestis HOM05D007211 ORTHO05D009060 7.0e-09 63.9 58 53.4
Duzib248G0756 Durio zibethinus HOM05D007211 ORTHO05D009060 8.6e-07 57.0 40 67.5
MCO09G621 Micromonas commoda HOM05D007211 ORTHO05D009060 9.5e-06 53.5 65 44.6


User provided reference genes

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