Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 0.0e+00 1607.0 808 100.0
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 0.0e+00 1390.9 820 87.9
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 1.6e-232 810.1 809 58.2
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 4.7e-229 798.5 811 57.7
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 1.8e-151 540.8 870 43.0
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 3.2e-84 317.4 920 33.5
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 1.3e-69 268.9 851 31.3
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 7.9e-67 259.6 867 30.6
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 1.8e-66 258.5 841 31.0
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 8.5e-61 239.6 821 31.2
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 1.2e-59 235.7 849 29.6
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 1.2e-59 235.7 849 30.3
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 6.1e-59 233.4 828 29.2
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 7.9e-59 233.0 845 28.0
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 7.9e-59 233.0 813 28.9
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 1.5e-57 228.8 869 29.7
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 5.7e-57 226.9 863 28.7
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 9.7e-57 226.1 341 45.5
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 2.8e-56 224.6 831 28.5
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 4.8e-56 223.8 239 54.0
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 8.2e-56 223.0 257 50.6
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 3.1e-55 221.1 894 28.1
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 5.3e-55 220.3 886 29.3
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 1.2e-54 219.2 230 53.5
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 1.5e-54 218.8 831 29.5
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 2.6e-54 218.0 414 37.4
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 2.6e-54 218.0 257 49.8
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 4.5e-54 217.2 263 50.2
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 1.0e-53 216.1 280 47.5
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 1.7e-53 215.3 336 42.3
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 2.2e-53 214.9 247 51.0
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 6.5e-53 213.4 241 49.4
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 3.2e-52 211.1 175 60.0
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 3.2e-52 211.1 806 29.9
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 4.2e-52 210.7 274 47.1
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 5.5e-52 210.3 809 30.8
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 1.6e-51 208.8 223 52.0
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 6.1e-51 206.8 276 45.7
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 1.0e-50 206.1 451 35.3
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 3.0e-50 204.5 850 28.4
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 6.7e-50 203.4 278 46.0
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 8.8e-50 203.0 292 46.6
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 1.1e-49 202.6 168 63.1
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 2.6e-49 201.4 299 42.8
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 5.7e-49 200.3 277 44.4
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 2.8e-48 198.0 241 46.5
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 3.7e-48 197.6 835 29.5
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 3.7e-48 197.6 223 49.3
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 4.8e-48 197.2 217 50.2
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 9.1e-47 193.0 318 41.2
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 1.6e-46 192.2 809 28.2
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.0e-45 189.5 420 36.2
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 1.3e-45 189.1 229 46.7
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 2.9e-45 188.0 216 48.1
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 3.5e-38 164.5 344 36.6
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 9.4e-36 156.4 190 44.2
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 1.0e-34 152.9 176 49.4
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 6.3e-32 143.7 169 45.0
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 2.5e-28 131.7 205 34.6
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.4e-26 125.9 212 36.3
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 8.8e-26 123.2 288 30.9
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.3e-24 119.4 267 31.8
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 1.3e-24 119.4 267 31.8
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 2.3e-18 98.6 112 49.1
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 4.6e-14 84.3 79 55.7
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 1.3e-13 82.8 168 29.8
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 5.0e-13 80.9 134 36.6
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 3.1e-10 71.6 47 70.2
CBR_g10951 Chara braunii HOM05D008075 ORTHO05D010208 2.0e-09 68.9 133 30.1
HanXRQChr10g0307451 Helianthus annuus HOM05D008075 ORTHO05D010208 2.2e-08 65.5 58 53.4
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 9.2e-07 60.1 99 37.4


User provided reference genes

Program Settings