Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 9.1e-201 703.4 355 100.0
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.4e-169 599.0 379 83.6
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 4.2e-145 518.5 382 72.3
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 2.4e-129 466.1 384 65.6
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 5.3e-124 448.4 335 69.3
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 2.9e-122 442.6 335 67.2
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 3.8e-122 442.2 368 62.8
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 8.4e-122 441.0 334 68.0
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 8.4e-122 441.0 335 67.5
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 4.2e-121 438.7 374 62.0
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 4.2e-121 438.7 335 68.1
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 6.0e-120 434.9 369 64.0
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 3.0e-119 432.6 361 63.4
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 5.1e-119 431.8 361 62.6
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 6.7e-119 431.4 380 60.3
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 1.5e-118 430.3 384 60.7
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 7.4e-118 427.9 362 62.2
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 1.3e-117 427.2 384 58.9
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 2.1e-117 426.4 335 64.5
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 1.4e-116 423.7 335 65.1
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 1.8e-116 423.3 362 61.0
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 3.1e-116 422.5 337 64.7
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 4.0e-116 422.2 383 59.3
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 6.9e-116 421.4 375 60.5
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 9.0e-116 421.0 391 58.3
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.6e-115 419.5 375 60.3
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 3.4e-115 419.1 387 58.9
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 1.3e-114 417.2 350 62.0
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 2.2e-114 416.4 392 57.4
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 2.2e-114 416.4 375 58.4
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 2.2e-114 416.4 382 58.6
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 8.4e-114 414.5 383 58.0
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 8.4e-114 414.5 331 65.0
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 1.1e-113 414.1 350 61.4
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 2.5e-113 412.9 382 57.9
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 5.5e-113 411.8 373 60.1
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 2.1e-112 409.8 334 62.0
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 2.1e-112 409.8 334 62.0
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 7.9e-112 407.9 336 61.9
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 7.9e-112 407.9 336 62.2
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 1.0e-111 407.5 360 59.2
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.0e-111 407.5 357 59.1
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 1.8e-111 406.8 371 58.8
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 2.3e-111 406.4 357 60.5
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 3.9e-111 405.6 333 64.0
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 6.7e-111 404.8 340 61.5
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 1.5e-110 403.7 391 54.5
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 1.5e-110 403.7 357 57.7
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.6e-109 400.2 384 56.2
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 4.1e-108 395.6 377 56.8
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 9.0e-108 394.4 334 60.2
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 9.0e-108 394.4 334 60.2
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.2e-107 394.0 258 74.8
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 2.0e-107 393.3 366 56.8
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 7.7e-107 391.3 386 54.9
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 1.9e-105 386.7 416 51.0
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 9.4e-105 384.4 250 76.8
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 4.6e-104 382.1 338 56.8
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 6.1e-104 381.7 252 75.0
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 6.1e-104 381.7 368 55.2
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 4.3e-102 375.6 448 48.7
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 2.8e-93 346.3 317 58.4
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 1.1e-92 344.4 292 61.0
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 1.8e-92 343.6 289 60.2
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 9.1e-92 341.3 309 60.5
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 9.1e-92 341.3 339 55.2
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.2e-91 340.9 250 67.2
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 1.2e-91 340.9 305 61.3
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.7e-90 337.0 250 64.8
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 5.0e-90 335.5 339 52.2
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 1.2e-88 330.9 346 52.6
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 3.3e-86 322.8 265 61.9
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 8.8e-79 298.1 335 46.6
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.8e-71 273.9 250 58.8
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.3e-71 273.5 245 58.4
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.1e-68 264.6 347 48.7
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.1e-65 254.6 177 68.4
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 6.8e-63 245.4 258 53.1
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.6e-62 243.4 377 39.0
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.8e-60 237.3 232 53.0
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 1.2e-59 234.6 358 41.1
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 2.9e-58 229.9 182 59.9
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 1.5e-57 227.6 228 55.3
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 4.7e-56 222.6 333 40.5
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 4.7e-56 222.6 212 55.7
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 2.4e-52 210.3 254 48.4
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 5.4e-52 209.1 203 55.2
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.2e-51 208.0 408 34.8
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 3.3e-49 199.9 189 57.7
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.2e-46 191.4 339 36.9
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.7e-45 186.4 101 87.1
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 4.6e-43 179.5 155 58.7
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 6.0e-43 179.1 250 40.4
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 1.7e-42 177.6 120 70.8
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.1e-40 170.6 255 42.4
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.1e-39 168.3 259 43.2
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 5.2e-39 166.0 337 33.8
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.4e-38 162.9 248 38.3
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 2.9e-37 160.2 253 37.9
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 4.9e-37 159.5 106 75.5
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 5.4e-36 156.0 258 38.8
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 1.0e-34 151.8 384 32.3
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 5.6e-33 146.0 263 34.6
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 9.6e-33 145.2 139 56.1
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 7.6e-30 135.6 134 55.2
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.2e-27 128.3 182 41.2
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 6.0e-27 125.9 176 46.0
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 5.8e-22 109.4 64 71.9
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 1.3e-21 108.2 110 60.0
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 9.3e-20 102.1 91 64.8
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.6e-19 101.3 56 87.5
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.7e-19 100.5 125 48.0
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 7.9e-19 99.0 56 85.7
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 1.3e-16 91.7 99 51.5
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 1.5e-14 84.7 251 26.7
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 9.3e-12 75.5 168 32.1
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 1.8e-10 71.2 48 70.8
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 6.7e-10 69.3 226 25.2
BcaB03g11936 Brassica carinata HOM05D005748 ORTHO05D007123 1.1e-09 68.6 185 27.6
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 1.6e-08 64.7 239 23.0
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 8.1e-08 62.4 242 24.8
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.1e-07 62.0 171 26.3
Nitab4.5_0000160g0130 Nicotiana tabacum HOM05D005748 ORTHO05D007123 5.3e-07 59.7 143 29.4
Cre14.g624350 Chlamydomonas reinhardtii HOM05D003793 ORTHO05D004471 2.0e-06 57.8 115 33.9
HanXRQChr12g0371641 Helianthus annuus HOM05D005748 ORTHO05D007123 2.6e-06 57.4 143 26.6


User provided reference genes

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