Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 8.9e-87 323.6 162 100.0
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 4.3e-57 224.9 116 94.0
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 3.7e-56 221.9 127 86.6
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 2.0e-54 216.1 129 82.2
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 1.2e-46 190.3 129 72.1
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 5.7e-41 171.4 112 69.6
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 5.7e-41 171.4 129 64.3
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 7.4e-41 171.0 124 64.5
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 2.8e-40 169.1 138 61.6
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 2.8e-40 169.1 126 62.7
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 2.8e-40 169.1 124 63.7
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 3.7e-40 168.7 126 65.1
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.1e-39 167.2 109 68.8
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.1e-39 167.2 113 63.7
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 1.4e-39 166.8 112 65.2
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.4e-39 166.8 114 66.7
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.8e-39 166.4 120 66.7
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.8e-39 166.4 120 66.7
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.8e-39 166.4 128 64.8
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 5.3e-39 164.9 129 65.1
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 6.9e-39 164.5 124 65.3
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 9.1e-39 164.1 114 65.8
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 9.1e-39 164.1 127 60.6
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.5e-38 163.3 128 63.3
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 1.5e-38 163.3 110 68.2
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 1.5e-38 163.3 109 67.0
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 1.5e-38 163.3 108 71.3
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 2.0e-38 162.9 109 68.8
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 3.4e-38 162.2 125 61.6
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 4.5e-38 161.8 114 66.7
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 4.5e-38 161.8 105 69.5
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 4.5e-38 161.8 130 66.2
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 5.9e-38 161.4 110 66.4
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 5.9e-38 161.4 126 61.9
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 1.3e-37 160.2 113 65.5
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 1.3e-37 160.2 127 59.8
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.7e-37 159.8 120 60.0
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.7e-37 159.8 130 57.7
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 2.2e-37 159.5 129 57.4
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 2.9e-37 159.1 109 67.0
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 3.8e-37 158.7 116 65.5
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 5.0e-37 158.3 130 56.2
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 8.5e-37 157.5 107 68.2
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 1.4e-36 156.8 109 70.6
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.5e-36 156.0 130 56.2
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 3.2e-36 155.6 130 56.2
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 4.2e-36 155.2 105 65.7
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 5.5e-36 154.8 105 65.7
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 1.2e-35 153.7 107 64.5
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.2e-35 153.7 118 64.4
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.2e-35 153.7 120 66.7
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.6e-35 153.3 115 60.0
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 2.1e-35 152.9 117 56.4
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 2.7e-35 152.5 105 63.8
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.7e-35 152.5 114 60.5
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 2.7e-35 152.5 118 63.6
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 2.7e-35 152.5 104 64.4
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 4.7e-35 151.8 131 53.4
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 4.7e-35 151.8 103 66.0
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 6.1e-35 151.4 130 53.8
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 7.9e-35 151.0 114 59.6
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 7.9e-35 151.0 107 60.7
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 2.3e-34 149.4 134 53.0
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 3.9e-34 148.7 120 57.5
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 3.9e-34 148.7 120 63.3
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 5.1e-34 148.3 105 61.0
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 5.1e-34 148.3 103 68.0
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 6.7e-34 147.9 149 49.7
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 1.5e-33 146.7 112 61.6
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 2.6e-33 146.0 128 55.5
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 3.3e-33 145.6 105 60.0
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 1.7e-32 143.3 103 63.1
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 2.8e-32 142.5 120 60.0
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.1e-31 140.6 103 61.2
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.8e-31 139.8 106 61.3
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 2.4e-31 139.4 96 67.7
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 1.6e-30 136.7 104 58.7
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.6e-30 136.7 106 59.4
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 7.7e-30 134.4 109 57.8
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 1.3e-29 133.7 127 51.2
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 2.2e-29 132.9 96 61.5
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 8.5e-29 131.0 94 62.8
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 1.1e-28 130.6 100 60.0
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.9e-28 129.8 94 62.8
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 4.2e-28 128.6 100 60.0
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 9.4e-28 127.5 122 50.0
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 1.2e-27 127.1 101 60.4
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 6.1e-27 124.8 86 66.3
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 1.4e-26 123.6 191 39.8
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 1.8e-26 123.2 103 55.3
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 2.2e-24 116.3 96 55.2
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 4.8e-24 115.2 120 48.3
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 2.4e-23 112.8 105 55.2
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 1.2e-22 110.5 118 49.2
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 1.0e-21 107.5 76 61.8
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.3e-21 107.1 74 64.9
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 2.2e-21 106.3 122 45.1
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 3.8e-21 105.5 80 57.5
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 6.5e-21 104.8 97 49.5
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 4.2e-20 102.1 65 67.7
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 5.5e-20 101.7 113 41.6
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 5.2e-18 95.1 99 42.4
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 1.5e-17 93.6 101 49.5
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 3.7e-16 89.0 93 48.4
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 5.4e-15 85.1 101 39.6
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 1.6e-11 73.6 98 38.8
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 4.7e-11 72.0 46 73.9
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 3.7e-08 62.4 46 63.0
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 3.1e-07 59.3 48 58.3
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.0e-06 56.6 70 44.3


User provided reference genes

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