Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.6e-234 815.8 448 100.0
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.8e-222 775.8 448 95.8
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 1.6e-186 656.4 448 83.3
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 5.1e-140 501.9 447 68.7
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 2.4e-134 483.0 447 66.4
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 7.1e-134 481.5 449 63.9
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 9.3e-134 481.1 448 66.3
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 1.1e-131 474.2 445 65.2
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 2.5e-131 473.0 451 66.1
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 4.3e-131 472.2 459 64.1
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 6.2e-130 468.4 452 64.2
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 6.2e-130 468.4 445 64.9
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 5.3e-129 465.3 454 64.8
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 1.5e-128 463.8 447 65.3
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 2.0e-128 463.4 454 64.5
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 2.2e-127 459.9 449 63.9
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 4.9e-127 458.8 447 64.0
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 3.2e-126 456.1 449 63.5
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 7.1e-126 454.9 458 62.2
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 2.7e-125 453.0 449 62.8
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 7.9e-125 451.4 445 63.6
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 7.9e-125 451.4 452 63.5
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 3.0e-124 449.5 457 62.4
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 8.7e-124 448.0 387 68.7
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 1.1e-123 447.6 449 62.1
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 2.5e-123 446.4 445 63.4
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 4.8e-122 442.2 448 61.8
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 6.2e-122 441.8 452 63.1
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 8.1e-122 441.4 448 61.6
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.1e-121 441.0 445 62.9
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 1.8e-121 440.3 447 61.3
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 2.4e-121 439.9 371 69.8
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 3.1e-121 439.5 448 61.4
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 1.2e-120 437.6 362 70.4
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 7.6e-120 434.9 445 57.1
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 4.9e-119 432.2 454 61.0
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 6.4e-119 431.8 458 60.7
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 1.5e-115 420.6 321 76.0
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 9.6e-115 417.9 315 77.8
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 2.1e-114 416.8 460 59.3
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 2.1e-114 416.8 442 60.0
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 1.1e-113 414.5 343 72.3
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 1.4e-113 414.1 446 61.4
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 2.4e-113 413.3 382 67.8
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 6.9e-113 411.8 386 64.0
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 9.0e-113 411.4 425 61.2
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.2e-112 411.0 366 68.9
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 1.2e-112 411.0 386 64.2
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 3.4e-112 409.5 446 60.5
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 5.8e-112 408.7 481 52.6
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 7.6e-112 408.3 378 65.1
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 1.0e-111 407.9 368 66.8
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 1.7e-111 407.1 378 65.1
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 2.2e-111 406.8 448 56.9
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 2.2e-111 406.8 386 65.8
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 2.9e-111 406.4 449 61.2
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 3.8e-111 406.0 421 60.1
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 6.5e-111 405.2 447 60.4
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 6.5e-111 405.2 392 62.8
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 1.1e-110 404.4 377 64.5
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 1.4e-110 404.1 444 60.6
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 4.2e-110 402.5 454 57.3
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 1.2e-109 401.0 448 60.5
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 1.6e-109 400.6 384 66.7
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 2.1e-109 400.2 448 59.8
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 2.7e-109 399.8 445 60.0
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 2.7e-109 399.8 385 64.9
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 4.6e-109 399.1 407 60.2
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 6.0e-109 398.7 454 57.7
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 1.0e-108 397.9 250 84.4
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 1.3e-108 397.5 445 59.8
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 1.3e-108 397.5 445 59.8
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 3.0e-108 396.4 444 59.9
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 3.0e-108 396.4 450 56.9
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 3.9e-108 396.0 396 62.6
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 3.9e-108 396.0 385 66.5
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 3.9e-108 396.0 385 66.5
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 5.1e-108 395.6 448 58.7
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 1.1e-107 394.4 360 68.9
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 1.9e-107 393.7 446 60.3
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 1.9e-107 393.7 440 53.9
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 3.7e-106 389.4 381 61.9
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 1.4e-105 387.5 383 63.7
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 6.9e-105 385.2 451 56.8
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 1.5e-104 384.0 425 59.8
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 1.5e-104 384.0 359 66.3
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 1.5e-104 384.0 451 56.1
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 3.4e-104 382.9 425 60.2
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 1.4e-102 377.5 413 61.5
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 7.9e-101 371.7 299 66.6
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 3.9e-100 369.4 317 71.0
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 2.5e-99 366.7 363 62.8
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 1.7e-98 364.0 331 68.0
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 4.1e-97 359.4 310 69.7
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 1.5e-96 357.5 375 61.6
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 8.5e-95 351.7 393 57.3
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 3.6e-93 346.3 316 68.4
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 4.1e-89 332.8 254 67.7
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 1.2e-88 331.3 400 57.5
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 9.4e-86 321.6 407 55.3
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 4.7e-85 319.3 315 66.0
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 8.8e-84 315.1 385 55.3
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 2.0e-83 313.9 383 53.8
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 3.7e-82 309.7 381 54.6
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.6e-72 277.7 189 76.7
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 1.1e-70 271.6 228 68.4
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 3.5e-56 223.4 336 47.9
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 2.3e-55 220.7 247 60.7
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 6.8e-52 209.1 305 51.1
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 1.2e-51 208.4 241 46.9
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 1.2e-51 208.4 275 53.8
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 1.4e-49 201.4 126 81.0
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 2.4e-49 200.7 341 44.9
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 5.0e-47 193.0 242 46.3
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 1.2e-43 181.8 331 45.3
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 1.1e-38 165.2 252 40.5
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 6.2e-37 159.5 163 53.4
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 5.2e-36 156.4 130 66.9
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 1.2e-35 155.2 237 50.2
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 1.7e-34 151.4 231 39.8
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 2.5e-30 137.5 77 93.5
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 8.4e-18 95.9 60 78.3
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.0e-15 89.0 160 45.0
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 2.4e-12 77.8 161 37.3
EL10Ac4g08098 Beta vulgaris HOM05D006243 ORTHO05D007688 9.0e-12 75.9 50 82.0
EL10Ac4g08939 Beta vulgaris HOM05D004819 ORTHO05D005654 1.1e-09 68.9 47 78.7


User provided reference genes

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