Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 9.2e-284 979.5 495 100.0
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 2.8e-216 755.4 401 95.5
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 1.3e-160 570.5 398 70.9
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 2.6e-153 546.2 403 69.0
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 1.1e-122 444.5 403 57.1
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 1.0e-112 411.4 402 53.7
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 1.3e-109 401.0 402 53.0
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 7.4e-108 395.2 400 52.5
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 8.2e-107 391.7 400 52.0
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.1e-106 391.3 400 51.8
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 1.1e-106 391.3 422 48.1
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.2e-105 387.9 402 50.2
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 2.6e-105 386.7 400 52.0
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.6e-105 386.7 400 52.0
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 5.9e-105 385.6 402 50.2
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 5.9e-105 385.6 400 51.0
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.0e-104 384.8 402 50.0
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 4.6e-102 375.9 397 50.6
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 6.1e-102 375.6 402 47.5
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 3.0e-101 373.2 402 50.2
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 8.8e-101 371.7 402 49.8
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 4.3e-100 369.4 403 46.9
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 2.8e-99 366.7 400 47.2
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 4.8e-99 365.9 406 49.0
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 1.4e-98 364.4 397 48.9
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.4e-98 364.4 399 50.4
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 1.8e-98 364.0 397 49.4
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 2.4e-98 363.6 400 48.5
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 6.9e-98 362.1 402 46.3
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 9.1e-98 361.7 400 47.0
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 9.1e-98 361.7 397 48.9
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.5e-97 360.9 402 49.3
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 5.9e-97 359.0 381 48.6
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 1.0e-96 358.2 402 49.0
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 1.3e-96 357.8 400 46.0
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.3e-96 357.8 402 47.5
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 6.5e-96 355.5 398 46.5
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 8.5e-96 355.1 402 46.3
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.1e-95 354.8 394 47.7
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 3.2e-95 353.2 397 49.4
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 4.2e-95 352.8 400 48.8
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 4.2e-95 352.8 424 45.0
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 5.5e-95 352.4 399 45.1
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 7.2e-95 352.1 397 48.9
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 1.2e-94 351.3 402 45.5
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 4.7e-94 349.4 399 45.9
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 4.7e-94 349.4 397 48.4
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 4.7e-94 349.4 411 47.7
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 4.7e-94 349.4 401 46.6
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 7.9e-94 348.6 401 48.9
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 7.9e-94 348.6 400 47.2
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 7.9e-94 348.6 400 46.0
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 2.3e-93 347.1 401 47.9
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 5.1e-93 345.9 407 45.7
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 5.1e-93 345.9 397 48.1
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 6.7e-93 345.5 384 46.9
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 1.1e-92 344.7 398 45.0
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 1.5e-92 344.4 404 45.3
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.5e-92 344.4 402 46.3
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 2.0e-92 344.0 397 44.8
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 2.6e-92 343.6 400 45.0
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 2.6e-92 343.6 406 46.3
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 3.3e-92 343.2 404 46.8
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 2.2e-91 340.5 397 44.1
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 8.2e-91 338.6 398 46.7
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 1.1e-90 338.2 397 47.1
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 1.1e-90 338.2 401 46.4
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 1.8e-90 337.4 404 46.8
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 4.1e-90 336.3 426 44.6
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 9.1e-90 335.1 402 45.3
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 9.1e-90 335.1 397 45.1
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 1.2e-89 334.7 424 45.3
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.2e-89 334.7 424 45.0
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.2e-89 334.7 424 45.0
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 1.5e-89 334.3 397 44.8
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 2.0e-89 334.0 362 49.4
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 2.0e-89 334.0 397 45.3
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 2.6e-89 333.6 401 47.4
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 1.3e-88 331.3 362 46.4
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 3.8e-88 329.7 396 45.2
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 8.5e-88 328.6 402 44.5
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 1.4e-87 327.8 425 44.7
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 4.2e-87 326.2 395 47.1
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 4.2e-87 326.2 403 44.2
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 7.2e-87 325.5 399 43.9
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 9.4e-87 325.1 404 43.1
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 1.6e-86 324.3 397 44.3
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 1.6e-86 324.3 400 44.2
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 2.3e-85 320.5 399 44.1
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 6.7e-85 318.9 396 46.7
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 9.7e-84 315.1 397 43.6
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 8.2e-83 312.0 400 42.0
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 3.1e-82 310.1 415 41.7
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 5.3e-82 309.3 404 40.8
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 5.9e-81 305.8 403 43.4
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.0e-80 305.1 404 42.1
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 1.0e-80 305.1 400 41.8
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 5.5e-79 299.3 401 43.6
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 2.0e-76 290.8 378 43.1
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 3.3e-76 290.0 275 50.5
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 9.7e-76 288.5 267 51.7
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 5.3e-74 282.7 390 41.8
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 7.0e-74 282.3 404 41.3
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 2.2e-72 277.3 401 39.9
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.1e-71 275.0 402 40.0
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.7e-70 270.4 404 40.3
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 5.2e-69 266.2 316 46.2
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 1.1e-66 258.5 339 44.0
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 7.0e-66 255.8 394 36.0
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 9.1e-66 255.4 279 49.8
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 1.2e-65 255.0 321 45.5
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 2.0e-60 237.7 181 63.0
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 2.8e-46 190.7 431 32.3
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 2.4e-42 177.6 226 41.2
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 1.1e-34 152.1 226 35.0
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 3.9e-32 143.7 202 37.1
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 3.6e-30 137.1 349 28.9
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 4.7e-30 136.7 186 42.5
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 5.3e-21 106.7 179 40.2
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 2.0e-20 104.8 354 27.4
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 3.4e-20 104.0 259 32.4
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 1.4e-18 98.6 352 23.6
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.7e-17 94.4 358 27.9
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 7.8e-17 92.8 275 29.1
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.0e-16 92.4 367 23.2
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.0e-16 92.4 367 23.2
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.6e-14 85.1 188 34.6
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 1.4e-13 82.0 123 38.2
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 6.2e-06 56.6 262 23.7


User provided reference genes

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