Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 1.2e-124 449.9 229 100.0
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 7.8e-44 181.4 94 91.5
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.4e-13 80.9 61 63.9
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 3.2e-13 79.7 63 63.5
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 5.4e-13 79.0 87 49.4
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 7.1e-13 78.6 109 45.9
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 1.6e-12 77.4 63 61.9
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 1.6e-12 77.4 64 60.9
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 1.6e-12 77.4 71 60.6
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 4.6e-12 75.9 59 64.4
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 4.6e-12 75.9 103 49.5
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 1.0e-11 74.7 64 57.8
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 1.3e-11 74.3 76 51.3
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 1.3e-11 74.3 75 52.0
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 1.7e-11 73.9 64 57.8
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 2.3e-11 73.6 65 64.6
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 3.0e-11 73.2 64 65.6
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 3.0e-11 73.2 62 58.1
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 6.6e-11 72.0 65 58.5
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 6.6e-11 72.0 60 58.3
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 8.7e-11 71.6 87 47.1
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 8.7e-11 71.6 65 60.0
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 1.1e-10 71.2 61 60.7
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 1.1e-10 71.2 64 56.2
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 1.5e-10 70.9 62 59.7
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 1.5e-10 70.9 74 48.6
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 1.5e-10 70.9 61 60.7
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 1.5e-10 70.9 60 58.3
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 2.5e-10 70.1 85 45.9
DCAR_009075 Daucus carota HOM05D000059 ORTHO05D012409 3.3e-10 69.7 69 55.1
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 3.3e-10 69.7 127 37.8
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 3.3e-10 69.7 54 68.5
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 4.3e-10 69.3 75 49.3
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 4.3e-10 69.3 99 42.4
TWI77G0719 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 4.3e-10 69.3 60 55.0
Medtr7g106840 Medicago truncatula HOM05D005113 ORTHO05D006045 7.3e-10 68.6 84 48.8
Solyc01g006760.3 Solanum lycopersicum HOM05D005113 ORTHO05D006045 7.3e-10 68.6 93 44.1
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 9.6e-10 68.2 60 61.7
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 9.6e-10 68.2 99 46.5
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.3e-09 67.8 60 55.0
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 1.6e-09 67.4 96 41.7
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 3.6e-09 66.2 111 40.5
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 3.6e-09 66.2 63 54.0
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 6.2e-09 65.5 63 54.0
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 6.2e-09 65.5 63 54.0
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 8.1e-09 65.1 95 43.2
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 8.1e-09 65.1 115 40.9
Sopen01g002760 Solanum pennellii HOM05D005113 ORTHO05D006045 8.1e-09 65.1 93 41.9
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 1.1e-08 64.7 108 42.6
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 1.1e-08 64.7 84 45.2
THA.LOC104803378 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 1.1e-08 64.7 57 59.6
HanXRQChr07g0196541 Helianthus annuus HOM05D005113 ORTHO05D006045 1.4e-08 64.3 90 45.6
Gohir.D04G093000 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.8e-08 63.9 59 57.6
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 2.4e-08 63.5 79 46.8
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 2.4e-08 63.5 85 50.6
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 2.4e-08 63.5 56 57.1
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 3.1e-08 63.2 111 39.6
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 4.0e-08 62.8 57 57.9
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 5.3e-08 62.4 116 41.4
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 5.3e-08 62.4 116 41.4
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 5.3e-08 62.4 116 41.4
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 5.3e-08 62.4 116 41.4
Lsat_1_v5_gn_2_101981 Lactuca sativa HOM05D005113 ORTHO05D006045 5.3e-08 62.4 95 42.1
PGSC0003DMG400021340 Solanum tuberosum HOM05D005113 ORTHO05D006045 5.3e-08 62.4 95 41.1
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 6.9e-08 62.0 67 52.2
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 9.0e-08 61.6 93 48.4
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 9.0e-08 61.6 96 39.6
Manes.09G042200 Manihot esculenta HOM05D005113 ORTHO05D006045 1.2e-07 61.2 95 43.2
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 2.0e-07 60.5 64 51.6
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.0e-07 60.5 118 38.1
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.0e-07 60.5 117 38.5
Psat3g027480 Pisum sativum HOM05D005113 ORTHO05D006045 2.0e-07 60.5 43 67.4
HPP92_013935 Vanilla planifolia HOM05D005113 ORTHO05D006045 2.0e-07 60.5 63 52.4
AL5G33010 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 2.6e-07 60.1 74 48.6
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 2.6e-07 60.1 63 54.0
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 2.6e-07 60.1 91 45.1
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 3.4e-07 59.7 59 57.6
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 3.4e-07 59.7 80 45.0
HPP92_012153 Vanilla planifolia HOM05D005113 ORTHO05D006045 3.4e-07 59.7 63 50.8
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 4.4e-07 59.3 58 55.2
Peaxi162Scf00203g00418 Petunia axillaris HOM05D005113 ORTHO05D006045 4.4e-07 59.3 101 37.6
ECA238G1367 Erigeron canadensis HOM05D005113 ORTHO05D006045 5.8e-07 58.9 90 41.1
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 5.8e-07 58.9 104 38.5
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 5.8e-07 58.9 99 42.4
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 7.6e-07 58.5 74 47.3
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 7.6e-07 58.5 108 40.7
PGR004G1479 Punica granatum HOM05D005113 ORTHO05D006045 7.6e-07 58.5 75 50.7
Lalb_Chr25g0287851 Lupinus albus HOM05D005113 ORTHO05D006045 9.9e-07 58.2 79 44.3
Lj1g0007298 Lotus japonicus HOM05D005113 ORTHO05D006045 1.3e-06 57.8 69 46.4
Sp5g09930 Schrenkiella parvula HOM05D005113 ORTHO05D006045 1.3e-06 57.8 58 53.4
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 1.3e-06 57.8 41 68.3
Thhalv10010863m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 1.7e-06 57.4 74 45.9
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 1.7e-06 57.4 74 44.6
PSO384G1750 Papaver somniferum HOM05D005113 ORTHO05D006045 1.7e-06 57.4 110 35.5
Sopen10g032200 Solanum pennellii HOM05D005113 ORTHO05D006045 2.2e-06 57.0 61 47.5
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 2.9e-06 56.6 60 51.7
BcaB02g08576 Brassica carinata HOM05D005113 ORTHO05D006045 2.9e-06 56.6 74 45.9
BcaC02g09265 Brassica carinata HOM05D005113 ORTHO05D006045 2.9e-06 56.6 74 45.9
A04p07080 Brassica napus HOM05D005113 ORTHO05D006045 2.9e-06 56.6 74 45.9
C04p40660 Brassica napus HOM05D005113 ORTHO05D006045 2.9e-06 56.6 74 45.9
BolC4t25648H Brassica oleracea HOM05D005113 ORTHO05D006045 2.9e-06 56.6 74 45.9
BraA04t16405Z Brassica rapa HOM05D005113 ORTHO05D006045 2.9e-06 56.6 74 45.9
Solyc10g081690.1 Solanum lycopersicum HOM05D005113 ORTHO05D006045 3.8e-06 56.2 79 40.5
PGSC0003DMG400028226 Solanum tuberosum HOM05D009103 ORTHO05D010883 3.8e-06 56.2 61 47.5
Eucgr.A02548 Eucalyptus grandis HOM05D005113 ORTHO05D006045 4.9e-06 55.8 85 41.2
Glyma.02G187500 Glycine max HOM05D005113 ORTHO05D006045 4.9e-06 55.8 80 43.8
CARHR130110 Cardamine hirsuta HOM05D005113 ORTHO05D006045 6.4e-06 55.5 57 50.9
Glyma.19G202000 Glycine max HOM05D005113 ORTHO05D006045 6.4e-06 55.5 69 46.4
Phvul.001G198200 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 6.4e-06 55.5 74 44.6


User provided reference genes

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