Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 3.5e-155 551.6 277 100.0
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.5e-142 509.6 277 93.5
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 2.0e-70 270.0 267 58.8
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 4.3e-57 225.7 262 51.9
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 5.1e-50 202.2 264 46.2
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 3.1e-39 166.4 263 41.8
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 2.6e-38 163.3 264 39.8
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 7.7e-38 161.8 259 39.8
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.0e-37 161.4 277 40.4
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 1.0e-37 161.4 245 40.8
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 1.3e-37 161.0 257 40.9
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 1.7e-37 160.6 257 41.2
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 2.2e-37 160.2 250 39.6
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 3.8e-37 159.5 276 39.9
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 4.2e-36 156.0 249 41.4
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 5.5e-36 155.6 244 41.8
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 9.4e-36 154.8 247 38.9
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.1e-35 153.7 263 38.8
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.0e-34 151.4 251 39.0
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 1.0e-34 151.4 249 39.4
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 1.4e-34 151.0 273 37.0
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.8e-34 150.6 244 41.0
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 2.3e-34 150.2 241 40.2
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 1.5e-33 147.5 275 38.5
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 4.4e-33 146.0 274 36.1
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 5.7e-33 145.6 253 37.9
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 9.7e-33 144.8 241 42.3
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 3.7e-32 142.9 256 37.1
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 4.8e-32 142.5 271 36.5
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 4.8e-32 142.5 278 36.0
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 6.3e-32 142.1 273 35.9
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 8.2e-32 141.7 250 38.4
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 8.2e-32 141.7 266 38.3
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.1e-31 141.4 238 37.0
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 3.1e-31 139.8 256 37.9
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 3.1e-31 139.8 242 38.8
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 3.1e-31 139.8 279 38.0
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 4.1e-31 139.4 272 34.9
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 4.1e-31 139.4 239 38.1
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 4.1e-31 139.4 276 36.6
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 7.0e-31 138.7 273 34.8
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 7.0e-31 138.7 245 38.8
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 9.1e-31 138.3 250 39.2
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 9.1e-31 138.3 242 38.4
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.2e-30 137.9 243 37.0
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 1.6e-30 137.5 244 40.2
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.0e-30 137.1 239 37.7
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 2.7e-30 136.7 238 38.7
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 4.5e-30 136.0 278 36.7
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 4.5e-30 136.0 251 38.6
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.0e-29 134.8 250 37.6
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 1.0e-29 134.8 239 36.8
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.7e-29 134.0 235 37.0
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 2.2e-29 133.7 260 38.5
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 2.2e-29 133.7 255 37.3
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 2.9e-29 133.3 272 33.5
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.9e-29 133.3 242 37.2
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 3.8e-29 132.9 254 37.0
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 3.8e-29 132.9 249 34.9
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 3.2e-28 129.8 238 38.2
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 4.2e-28 129.4 238 37.4
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 5.5e-28 129.0 258 39.9
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 1.6e-27 127.5 235 37.0
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 2.1e-27 127.1 235 37.0
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 3.6e-27 126.3 259 35.1
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.7e-27 125.9 241 36.5
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 3.0e-26 123.2 278 32.4
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 4.0e-26 122.9 236 36.0
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 1.5e-25 120.9 246 36.6
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.5e-25 120.9 280 33.2
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 1.5e-25 120.9 261 34.1
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.6e-25 120.2 212 39.2
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 9.8e-25 118.2 242 36.4
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 6.3e-24 115.5 268 35.8
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.4e-23 114.4 236 37.7
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 3.1e-23 113.2 229 37.1
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 2.5e-20 103.6 83 57.8
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 5.5e-20 102.4 199 36.7
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 7.2e-20 102.1 315 30.5
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 2.8e-19 100.1 76 64.5
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 2.3e-18 97.1 79 57.0
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 2.3e-18 97.1 79 57.0
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 2.3e-18 97.1 79 57.0
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 2.3e-18 97.1 79 57.0
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 2.3e-18 97.1 79 57.0
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 2.3e-18 97.1 79 57.0
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 4.0e-18 96.3 79 57.0
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 4.0e-18 96.3 79 55.7
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 4.0e-18 96.3 108 45.4
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 5.2e-18 95.9 244 30.3
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 8.8e-18 95.1 79 57.0
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 1.2e-17 94.7 83 51.8
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 2.0e-17 94.0 79 57.0
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 2.8e-16 90.1 95 46.3
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 4.9e-16 89.4 91 49.5
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 3.1e-15 86.7 78 55.1
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 3.1e-15 86.7 82 46.3
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 1.7e-13 80.9 189 32.8
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 5.6e-12 75.9 233 28.8
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.4e-07 61.2 122 33.6
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 1.6e-06 57.8 66 39.4
CDE01G0585 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 5.9e-06 55.8 52 50.0


User provided reference genes

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