Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038341 Chenopodium quinoa HOM05D005721 ORTHO05D006758 0.0e+00 1201.4 606 100.0
AUR62023905 Chenopodium quinoa HOM05D005721 ORTHO05D006758 4.1e-312 1073.5 585 94.2
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 3.5e-253 878.2 712 68.5
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 4.3e-243 844.7 678 67.4
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 1.5e-224 783.1 653 66.5
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 2.7e-213 745.7 688 59.6
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 1.4e-209 733.4 686 56.4
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 1.0e-207 727.2 687 57.2
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 1.7e-207 726.5 684 57.5
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 2.9e-207 725.7 688 57.6
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 4.2e-206 721.8 691 55.9
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 5.5e-206 721.5 683 57.2
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 1.4e-204 716.8 682 58.1
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 8.8e-204 714.1 687 56.5
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 1.5e-203 713.4 677 57.0
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 7.4e-203 711.1 678 56.3
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 1.7e-202 709.9 683 57.1
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 2.8e-202 709.1 684 55.8
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 1.1e-201 707.2 682 57.6
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.4e-201 706.8 677 57.2
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 1.4e-201 706.8 677 57.2
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 2.4e-201 706.1 683 57.1
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 2.6e-200 702.6 677 56.1
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 4.5e-200 701.8 677 56.1
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 1.3e-199 700.3 682 56.5
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 1.3e-199 700.3 678 57.2
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 2.2e-199 699.5 686 55.0
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 5.0e-199 698.4 658 57.9
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 8.5e-199 697.6 681 56.8
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 1.1e-198 697.2 689 56.3
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 1.9e-198 696.4 673 57.2
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 2.5e-198 696.0 680 56.0
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 9.4e-198 694.1 682 56.3
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 9.4e-198 694.1 647 57.3
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 3.6e-197 692.2 674 57.0
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 8.0e-197 691.0 692 55.2
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 1.0e-196 690.6 674 57.0
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 1.8e-196 689.9 682 55.3
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 4.0e-196 688.7 674 57.1
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 1.2e-195 687.2 690 53.9
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 2.6e-195 686.0 676 56.1
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 5.7e-195 684.9 687 54.3
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 7.5e-195 684.5 676 55.9
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 2.2e-194 682.9 683 55.5
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 2.2e-194 682.9 695 54.1
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 2.8e-194 682.6 677 55.2
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 2.8e-194 682.6 676 55.8
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 6.3e-194 681.4 682 55.9
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 8.3e-194 681.0 680 53.8
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 7.0e-193 677.9 646 57.6
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 9.1e-193 677.6 682 55.4
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 3.8e-191 672.2 685 54.0
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 1.5e-190 670.2 684 55.0
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 2.5e-190 669.5 690 55.5
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 7.2e-190 667.9 683 53.9
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 2.7e-189 666.0 682 55.3
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 6.1e-189 664.8 676 54.0
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 6.1e-189 664.8 676 54.0
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 1.4e-188 663.7 676 53.8
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 2.0e-187 659.8 659 55.2
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 5.7e-187 658.3 683 53.3
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 5.7e-187 658.3 657 55.4
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 5.7e-187 658.3 687 54.0
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 7.5e-187 657.9 562 61.7
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 1.3e-186 657.1 659 55.1
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 2.2e-186 656.4 687 53.1
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 2.8e-186 656.0 673 53.9
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.8e-186 656.0 610 58.0
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 1.4e-185 653.7 685 53.4
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 2.7e-184 649.4 675 53.8
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 4.5e-184 648.7 673 53.3
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 4.5e-184 648.7 661 54.9
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 4.5e-184 648.7 673 53.3
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 3.8e-183 645.6 684 53.2
Lj9A516G96 Lonicera japonica HOM05D005721 ORTHO05D006758 5.0e-183 645.2 662 55.1
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 4.2e-182 642.1 672 53.4
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 9.5e-182 641.0 647 55.0
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 1.6e-181 640.2 673 52.9
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 8.0e-181 637.9 682 51.9
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 2.4e-177 626.3 651 52.7
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 2.4e-177 626.3 651 52.7
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 2.4e-177 626.3 677 53.5
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 4.1e-177 625.5 646 54.0
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 5.6e-174 615.1 673 51.4
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 1.2e-173 614.0 666 52.1
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 2.1e-173 613.2 676 51.2
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 3.1e-172 609.4 690 50.4
Hma1.2p1_0388F.1_g142120 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 3.1e-172 609.4 556 57.4
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 2.2e-170 603.2 653 52.5
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 1.9e-169 600.1 681 51.7
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 2.4e-169 599.7 690 49.9
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 1.6e-168 597.0 678 50.3
Cpa.g.sc131.22 Carica papaya HOM05D005721 ORTHO05D006758 1.4e-156 557.4 626 51.8
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 1.3e-141 507.7 586 50.0
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 4.8e-141 505.8 651 47.2
Oeu026535.1 Olea europaea HOM05D005721 ORTHO05D006758 9.0e-140 501.5 474 56.3
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 1.3e-138 497.7 683 43.3
Zm00001eb155350 Zea mays HOM05D005721 ORTHO05D006758 1.2e-131 474.6 529 49.9
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 1.6e-125 454.1 644 43.2
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 1.3e-117 427.9 662 40.3
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 2.1e-117 427.2 682 39.3
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 4.1e-116 422.9 678 38.5
MELO3C024406.2 Cucumis melo HOM05D005721 ORTHO05D006758 1.2e-112 411.4 522 48.1
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 8.7e-111 405.2 672 37.8
arahy.Tifrunner.gnm1.ann1.NL3M0M Arachis hypogaea HOM05D005721 ORTHO05D006758 1.6e-83 314.7 370 48.6
CBR_g57226 Chara braunii HOM05D005721 ORTHO05D006758 7.2e-81 305.8 650 31.7
FAN14G1222 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.5e-49 201.8 221 49.3
Gorai.010G178600 Gossypium raimondii HOM05D005721 ORTHO05D006758 3.3e-41 174.1 150 56.7
Oeu023783.1 Olea europaea HOM05D005721 ORTHO05D006758 2.1e-40 171.4 250 44.4
arahy.Tifrunner.gnm1.ann1.402B9T Arachis hypogaea HOM05D005721 ORTHO05D006758 1.1e-39 169.1 240 45.0
FvH4_6g32370 Fragaria vesca HOM05D005721 ORTHO05D006758 2.4e-36 157.9 141 56.0
VMungo0251G0043 Vigna mungo HOM05D005721 ORTHO05D006758 7.1e-36 156.4 131 59.5
Gohir.D06G152751 Gossypium hirsutum HOM05D005721 ORTHO05D006758 7.8e-35 152.9 149 51.0
QL05p015216 Quercus lobata HOM05D005721 ORTHO05D006758 1.7e-34 151.8 167 49.7
arahy.Tifrunner.gnm1.ann1.P3QXG2 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.5e-33 148.7 149 52.3
Gohir.A06G146950 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.4e-31 142.1 148 50.7
arahy.Tifrunner.gnm1.ann1.F8M988 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.2e-27 129.0 86 70.9
Zm00001eb344360 Zea mays HOM05D005721 ORTHO05D006758 3.5e-27 127.5 82 72.0
arahy.Tifrunner.gnm1.ann1.SY3941 Arachis hypogaea HOM05D005721 ORTHO05D006758 2.1e-24 118.2 82 68.3
HanXRQChr05g0162621 Helianthus annuus HOM05D005721 ORTHO05D006758 2.2e-21 108.2 112 52.7
Glyma.09G112900 Glycine max HOM05D005721 ORTHO05D006758 1.9e-20 105.1 101 50.5
HanXRQChr04g0123091 Helianthus annuus HOM05D005721 ORTHO05D006758 2.1e-19 101.7 110 50.0
Zm00001eb192810 Zea mays HOM05D005721 ORTHO05D006758 1.3e-18 99.0 110 51.8
Zm00001eb419420 Zea mays HOM05D005721 ORTHO05D006758 1.3e-18 99.0 56 80.4
Glyma.16G136400 Glycine max HOM05D005721 ORTHO05D006758 5.1e-18 97.1 107 51.4
Glyma.16G086100 Glycine max HOM05D005721 ORTHO05D006758 6.7e-18 96.7 107 51.4
Glyma.12G149950 Glycine max HOM05D005721 ORTHO05D006758 1.9e-17 95.1 53 79.2
SEGI_20658 Sequoiadendron giganteum HOM05D005721 ORTHO05D006758 8.1e-16 89.7 248 27.0
arahy.Tifrunner.gnm1.ann1.EXE9LQ Arachis hypogaea HOM05D005721 ORTHO05D006758 6.9e-15 86.7 52 75.0
HanXRQChr09g0276291 Helianthus annuus HOM05D005721 ORTHO05D006758 6.7e-10 70.1 48 66.7
COL.COLO4_30597 Corchorus olitorius HOM05D005721 ORTHO05D006758 4.8e-08 63.9 82 45.1


User provided reference genes

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