Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 0.0e+00 1531.9 811 100.0
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 0.0e+00 1285.0 749 92.0
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 0.0e+00 1080.9 777 70.9
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 2.8e-274 948.7 796 61.9
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.2e-272 943.3 799 62.7
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 5.9e-272 941.0 800 62.5
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.0e-271 940.3 666 70.4
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 1.9e-270 936.0 583 76.2
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 2.5e-270 935.6 786 60.6
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 3.3e-270 935.3 804 58.3
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 2.1e-269 932.6 806 59.3
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.3e-268 929.1 806 60.7
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 3.0e-268 928.7 801 62.0
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 1.2e-267 926.8 690 67.1
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.0e-267 926.0 801 62.2
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 5.7e-267 924.5 787 59.3
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 1.7e-266 922.9 808 62.3
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 6.3e-266 921.0 794 58.4
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 8.3e-266 920.6 779 60.1
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.4e-265 919.8 798 59.6
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.4e-265 919.8 798 59.6
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 1.4e-265 919.8 794 58.8
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.7e-264 915.6 802 59.4
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 8.6e-263 910.6 592 72.8
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 4.3e-262 908.3 791 58.4
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 2.8e-261 905.6 793 59.9
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 2.8e-261 905.6 805 60.4
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 4.7e-261 904.8 683 66.9
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 5.2e-260 901.4 792 61.5
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 6.8e-260 901.0 789 59.8
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.0e-259 899.4 815 57.9
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 3.4e-259 898.7 789 59.7
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 4.4e-259 898.3 782 59.6
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 7.5e-259 897.5 790 57.7
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 1.1e-257 893.6 705 64.7
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 1.4e-257 893.3 790 60.4
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 7.0e-257 891.0 759 58.5
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 7.0e-257 891.0 783 62.1
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 7.8e-256 887.5 791 59.0
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 2.3e-255 885.9 793 58.1
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 2.3e-255 885.9 787 61.0
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 9.5e-254 880.6 629 67.9
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 1.2e-253 880.2 737 59.3
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 4.7e-253 878.2 772 59.3
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 1.4e-252 876.7 783 59.3
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 1.5e-251 873.2 793 59.4
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 2.0e-251 872.8 780 58.7
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 4.4e-251 871.7 521 74.9
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 9.8e-251 870.5 671 66.2
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 1.7e-250 869.8 522 74.7
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 1.7e-250 869.8 531 74.6
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 1.7e-250 869.8 810 56.2
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 2.9e-250 869.0 792 59.1
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 2.9e-250 869.0 789 58.4
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 4.9e-250 868.2 786 58.1
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 4.9e-250 868.2 774 58.5
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 1.1e-249 867.1 781 60.6
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 2.7e-248 862.4 523 73.8
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 1.7e-247 859.8 809 56.1
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 5.0e-247 858.2 781 59.8
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 4.3e-246 855.1 776 57.2
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 1.6e-245 853.2 794 57.2
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 1.1e-244 850.5 789 56.7
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 4.0e-244 848.6 800 57.0
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 2.6e-243 845.9 686 64.6
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 3.2e-241 839.0 540 70.7
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 1.6e-240 836.6 716 60.9
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 3.5e-240 835.5 780 58.6
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 2.3e-239 832.8 781 55.8
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 3.6e-237 825.5 789 57.8
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 8.9e-236 820.8 813 55.1
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 3.4e-235 818.9 529 71.3
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 3.9e-231 805.4 815 53.6
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 1.9e-230 803.1 775 57.7
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 1.1e-228 797.3 793 55.4
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 1.2e-227 793.9 772 54.9
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 3.8e-226 788.9 528 68.8
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 3.8e-226 788.9 707 59.1
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 8.4e-226 787.7 726 57.9
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 1.1e-225 787.3 524 68.3
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 1.4e-225 786.9 550 66.4
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 7.8e-224 781.2 879 50.6
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 7.8e-224 781.2 771 52.4
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 2.8e-213 746.1 824 52.3
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 1.2e-208 730.7 780 51.0
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 7.1e-201 704.9 781 50.8
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 3.6e-184 649.4 609 57.5
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 1.8e-167 594.0 533 56.5
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 7.7e-155 552.0 497 55.3
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 3.8e-154 549.7 587 55.0
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.5e-153 547.7 327 73.7
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 4.0e-151 539.7 374 67.6
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 4.0e-151 539.7 539 50.5
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 2.4e-140 503.8 826 38.9
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 4.6e-139 499.6 487 51.5
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.3e-133 481.5 397 64.2
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 2.1e-128 464.2 492 53.3
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.3e-127 460.7 264 77.3
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 2.7e-107 394.0 346 55.5
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.4e-100 370.9 370 51.1
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 1.3e-96 358.6 188 85.6
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 1.0e-85 322.4 193 75.6
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 4.2e-84 317.0 502 41.6
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 5.7e-81 306.6 325 57.8
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 4.8e-80 303.5 341 46.6
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 9.4e-68 262.7 163 69.9
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 2.7e-43 181.4 327 41.6
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 9.5e-36 156.4 117 63.2
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 6.4e-32 143.7 360 31.7
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 2.7e-30 138.3 83 73.5
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.8e-19 101.7 122 43.4
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 5.8e-17 94.0 72 52.8
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 7.5e-17 93.6 75 58.7


User provided reference genes

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