Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038223 Chenopodium quinoa HOM05D004860 ORTHO05D006366 4.9e-154 547.7 271 100.0
AUR62030079 Chenopodium quinoa HOM05D004860 ORTHO05D006366 2.5e-150 535.4 270 98.5
Ah.07g203980 Amaranthus hybridus HOM05D004860 ORTHO05D006366 6.8e-140 500.7 270 90.7
EL10Ac3g06352 Beta vulgaris HOM05D004860 ORTHO05D006366 7.1e-137 490.7 307 81.1
Ah.13g074180 Amaranthus hybridus HOM05D004860 ORTHO05D006366 1.8e-132 476.1 270 85.2
TAR636G2819 Trochodendron aralioides HOM05D004860 ORTHO05D006366 3.1e-132 475.3 270 85.2
Potri.008G202300 Populus trichocarpa HOM05D004860 ORTHO05D006366 4.4e-131 471.5 270 83.0
Hund12197 Selenicereus undatus HOM05D004860 ORTHO05D000105 5.8e-131 471.1 270 84.4
Thecc.04G221400 Theobroma cacao HOM05D004860 ORTHO05D006366 5.8e-131 471.1 270 83.7
Actinidia40192 Actinidia chinensis HOM05D004860 ORTHO05D006366 1.3e-130 469.9 270 84.4
PGR031G2771 Punica granatum HOM05D004860 ORTHO05D006366 1.7e-130 469.5 270 83.3
QL06p004255 Quercus lobata HOM05D004860 ORTHO05D006366 2.9e-130 468.8 269 84.8
GSVIVG01017886001 Vitis vinifera HOM05D004860 ORTHO05D006366 2.9e-130 468.8 270 84.4
CiPaw.02G092200 Carya illinoinensis HOM05D004860 ORTHO05D006366 4.9e-130 468.0 270 83.7
Duzib268G1873 Durio zibethinus HOM05D004860 ORTHO05D006366 6.4e-130 467.6 270 83.3
MELO3C006570.2 Cucumis melo HOM05D004860 ORTHO05D006366 8.4e-130 467.2 270 83.0
TAR365G0160 Trochodendron aralioides HOM05D004860 ORTHO05D006366 1.4e-129 466.5 270 83.7
COL.COLO4_21645 Corchorus olitorius HOM05D004860 ORTHO05D006366 1.9e-129 466.1 270 82.6
Nn4g26191 Nelumbo nucifera HOM05D004860 ORTHO05D006366 3.2e-129 465.3 270 82.6
CSS0038220 Camellia sinensis var. sinensis HOM05D004860 ORTHO05D006366 4.2e-129 464.9 270 83.3
ClCG05G005460 Citrullus lanatus HOM05D004860 ORTHO05D006366 4.2e-129 464.9 269 82.9
Gohir.A05G316600 Gossypium hirsutum HOM05D004860 ORTHO05D006366 4.2e-129 464.9 270 83.0
Manes.15G022900 Manihot esculenta HOM05D004860 ORTHO05D006366 5.4e-129 464.5 270 82.6
Ciclev10005293m.g Citrus clementina HOM05D004860 ORTHO05D006366 7.1e-129 464.2 270 83.0
TWI73G0632 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 7.1e-129 464.2 270 83.0
CANSAT78G2493 Cannabis sativa HOM05D004860 ORTHO05D006366 1.2e-128 463.4 270 82.2
Gorai.009G340700 Gossypium raimondii HOM05D004860 ORTHO05D006366 1.2e-128 463.4 271 82.7
CsaV3_3G013760 Cucumis sativus L. HOM05D004860 ORTHO05D006366 2.7e-128 462.2 270 82.2
Eucgr.D02658 Eucalyptus grandis HOM05D004860 ORTHO05D006366 2.7e-128 462.2 270 81.9
Sed0000368 Sechium edule HOM05D004860 ORTHO05D006366 2.7e-128 462.2 270 83.3
Os07g0211800 Oryza sativa ssp. japonica HOM05D004860 ORTHO05D006366 6.0e-128 461.1 270 81.9
Prupe.1G151200 Prunus persica HOM05D004860 ORTHO05D006366 6.0e-128 461.1 270 81.9
ECA240G4413 Erigeron canadensis HOM05D004860 ORTHO05D006366 7.8e-128 460.7 270 82.2
Cc03_g03100 Coffea canephora HOM05D004860 ORTHO05D006366 1.3e-127 459.9 270 81.5
FAN07G1456 Fragaria x ananassa HOM05D004860 ORTHO05D006366 2.3e-127 459.1 270 81.9
MD16G1183500 Malus domestica HOM05D004860 ORTHO05D006366 2.3e-127 459.1 270 82.2
Oeu029304.1 Olea europaea HOM05D004860 ORTHO05D006366 3.0e-127 458.8 270 81.9
HanXRQChr09g0248101 Helianthus annuus HOM05D004860 ORTHO05D006366 3.9e-127 458.4 270 81.1
Solyc01g080140.3 Solanum lycopersicum HOM05D004860 ORTHO05D006366 5.1e-127 458.0 270 81.1
Duzib212G0960 Durio zibethinus HOM05D004860 ORTHO05D006366 6.6e-127 457.6 276 80.4
Atru.chr4.2574 Acer truncatum HOM05D004860 ORTHO05D006366 8.7e-127 457.2 270 81.1
RcHm_v2.0_Chr4g0418381 Rosa chinensis HOM05D004860 ORTHO05D006366 8.7e-127 457.2 270 81.5
Dinv38393 Davidia involucrata HOM05D001530 ORTHO05D004168 1.1e-126 456.8 263 84.8
FvH4_4g14470 Fragaria vesca HOM05D004860 ORTHO05D006366 1.1e-126 456.8 270 81.5
FAN22G2324 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.1e-126 456.8 270 81.9
Sopen01g031920 Solanum pennellii HOM05D004860 ORTHO05D006366 1.1e-126 456.8 270 81.1
FAN12G3962 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.9e-126 456.1 270 81.5
Cfa015580 Carpinus fangiana HOM05D004860 ORTHO05D006366 4.3e-126 454.9 271 82.7
Glyma.17G017300 Glycine max HOM05D004860 ORTHO05D006366 5.6e-126 454.5 270 81.1
Lj4g0005512 Lotus japonicus HOM05D004860 ORTHO05D006366 5.6e-126 454.5 270 80.7
Zm00001eb303280 Zea mays HOM05D004860 ORTHO05D006366 9.6e-126 453.8 270 80.0
Glyma.07G256800 Glycine max HOM05D004860 ORTHO05D006366 2.1e-125 452.6 270 80.7
MSTRG.24756 Avicennia marina HOM05D004860 ORTHO05D006366 3.6e-125 451.8 270 80.4
PSO407G0112 Papaver somniferum HOM05D004860 ORTHO05D006366 4.8e-125 451.4 270 80.7
MBI17_g12009_MAGBIO Magnolia biondii HOM05D004860 ORTHO05D006366 6.2e-125 451.1 270 81.1
MD13G1182900 Malus domestica HOM05D004860 ORTHO05D006366 1.1e-124 450.3 270 80.4
Nitab4.5_0001247g0010 Nicotiana tabacum HOM05D004860 ORTHO05D006366 1.1e-124 450.3 270 81.1
PSO170G1688 Papaver somniferum HOM05D004860 ORTHO05D006366 1.1e-124 450.3 270 80.7
CDE02G3435 Ceratophyllum demersum HOM05D004860 ORTHO05D006366 1.4e-124 449.9 270 79.3
Lalb_Chr07g0177321 Lupinus albus HOM05D004860 ORTHO05D006366 1.4e-124 449.9 270 79.6
Medtr4g117310 Medicago truncatula HOM05D004860 ORTHO05D006366 2.4e-124 449.1 270 79.3
Phvul.003G093000 Phaseolus vulgaris HOM05D004860 ORTHO05D006366 2.4e-124 449.1 270 80.0
SalBow5G0733 Salvia bowleyana HOM05D004860 ORTHO05D006366 2.4e-124 449.1 276 79.3
SalBow5G4413 Salvia bowleyana HOM05D004860 ORTHO05D006366 2.4e-124 449.1 276 79.3
Thhalv10013904m.g Eutrema salsugineum HOM05D004860 ORTHO05D006366 3.1e-124 448.7 270 80.0
Carub.0006s1737 Capsella rubella HOM05D004860 ORTHO05D006366 4.0e-124 448.4 270 79.6
Ca_21591_v3 Cicer arietinum L. HOM05D004860 ORTHO05D006366 4.0e-124 448.4 270 79.3
Psat4g031440 Pisum sativum HOM05D004860 ORTHO05D006366 4.0e-124 448.4 270 79.6
TPR.G20138 Trifolium pratense HOM05D004860 ORTHO05D006366 4.0e-124 448.4 270 79.6
Migut.N00151 Erythranthe guttata HOM05D004860 ORTHO05D006366 5.3e-124 448.0 270 80.0
THA.LOC104822311 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 5.3e-124 448.0 270 79.3
Aqoxy2G03261 Aquilegia oxysepala HOM05D004860 ORTHO05D006366 9.0e-124 447.2 270 80.0
BcaC04g18624 Brassica carinata HOM05D004860 ORTHO05D006366 1.2e-123 446.8 270 78.9
BolC3t13554H Brassica oleracea HOM05D004860 ORTHO05D006366 1.2e-123 446.8 270 78.9
CARHR193940 Cardamine hirsuta HOM05D004860 ORTHO05D006366 1.2e-123 446.8 270 79.6
AT5G19050 Arabidopsis thaliana HOM05D004860 ORTHO05D006366 2.0e-123 446.0 270 79.3
A10p20640 Brassica napus HOM05D004860 ORTHO05D006366 2.0e-123 446.0 270 78.9
BolC9t58612H Brassica oleracea HOM05D004860 ORTHO05D006366 2.0e-123 446.0 270 78.9
BraA10t44127Z Brassica rapa HOM05D004860 ORTHO05D006366 2.0e-123 446.0 270 78.9
Aa31LG11G10670 Aethionema arabicum HOM05D004860 ORTHO05D006366 3.4e-123 445.3 281 77.6
arahy.Tifrunner.gnm1.ann1.PDW3QZ Arachis hypogaea HOM05D004860 ORTHO05D006366 4.5e-123 444.9 270 80.4
Lj3C761T9 Lonicera japonica HOM05D004860 ORTHO05D006366 4.5e-123 444.9 270 77.8
BcaB01g04878 Brassica carinata HOM05D004860 ORTHO05D006366 5.8e-123 444.5 270 78.5
BcaB01g05289 Brassica carinata HOM05D004860 ORTHO05D006366 5.8e-123 444.5 270 78.5
BraA03t10247Z Brassica rapa HOM05D004860 ORTHO05D006366 5.8e-123 444.5 270 78.9
Sp6g25330 Schrenkiella parvula HOM05D004860 ORTHO05D006366 5.8e-123 444.5 270 78.9
C09p57430 Brassica napus HOM05D004860 ORTHO05D006366 7.6e-123 444.1 270 78.9
THA.LOC104818790 Tarenaya hassleriana HOM05D004860 ORTHO05D006366 7.6e-123 444.1 278 77.7
arahy.Tifrunner.gnm1.ann1.K193BP Arachis hypogaea HOM05D004860 ORTHO05D006366 9.9e-123 443.7 270 80.0
SEGI_28969 Sequoiadendron giganteum HOM05D004860 ORTHO05D006366 9.9e-123 443.7 270 78.1
AL6G30430 Arabidopsis lyrata HOM05D004860 ORTHO05D006366 1.7e-122 443.0 270 78.9
BcaB08g36622 Brassica carinata HOM05D004860 ORTHO05D006366 8.4e-122 440.7 270 77.8
Haze_00965 Corylus avellana HOM05D004860 ORTHO05D006366 1.1e-121 440.3 347 65.7
Migut.G00288 Erythranthe guttata HOM05D004860 ORTHO05D006366 3.5e-120 435.3 270 77.8
C03p10800 Brassica napus HOM05D004860 ORTHO05D006366 9.6e-118 427.2 261 78.9
unitig_8.g2879 Utricularia gibba HOM05D004860 ORTHO05D006366 1.6e-117 426.4 270 75.9
Lsat_1_v5_gn_7_67361 Lactuca sativa HOM05D004860 ORTHO05D006366 2.8e-117 425.6 270 78.1
Sabra08G0159200 Salix brachista HOM05D004860 ORTHO05D006366 3.1e-116 422.2 245 82.0
Peaxi162Scf01766g00011 Petunia axillaris HOM05D004860 ORTHO05D006366 2.0e-115 419.5 270 76.3
CAN.G183.30 Capsicum annuum HOM05D004860 ORTHO05D006366 2.6e-115 419.1 270 77.0
Cpa.g.sc16.26 Carica papaya HOM05D004860 ORTHO05D006366 2.2e-114 416.0 244 81.6
CiPaw.01G159800 Carya illinoinensis HOM05D004860 ORTHO05D006366 2.2e-114 416.0 270 77.0
A03p09270 Brassica napus HOM05D004860 ORTHO05D006366 1.1e-113 413.7 253 79.4
Gohir.D05G318100 Gossypium hirsutum HOM05D004860 ORTHO05D006366 2.1e-112 409.5 270 75.2
Actinidia12990 Actinidia chinensis HOM05D004860 ORTHO05D006366 7.9e-112 407.5 257 79.4
Pp3c4_4720 Physcomitrium patens HOM05D004860 ORTHO05D006366 4.0e-108 395.2 270 69.3
Mapoly0095s0018 Marchantia polymorpha HOM05D004860 ORTHO05D006366 5.3e-108 394.8 270 70.0
AagrBONN_evm.TU.Sc2ySwM_117.2400 Anthoceros agrestis HOM05D004860 ORTHO05D006366 2.0e-107 392.9 269 69.1
Lj6A565G28 Lonicera japonica HOM05D004860 ORTHO05D006366 2.6e-107 392.5 226 84.5
SMO119G0283 Selaginella moellendorffii HOM05D004860 ORTHO05D006366 3.0e-103 379.0 270 70.0
Dinv44480 Davidia involucrata HOM05D001530 ORTHO05D004168 4.3e-102 375.2 248 77.0
Rhsim04G0207200 Rhododendron simsii HOM05D004860 ORTHO05D006366 7.6e-99 364.4 260 72.3
vmacro08274 Vaccinium macrocarpon HOM05D004860 ORTHO05D006366 1.7e-98 363.2 245 75.1
Nn1g02160 Nelumbo nucifera HOM05D004860 ORTHO05D006366 1.1e-97 360.5 223 79.8
Manes.03G184900 Manihot esculenta HOM05D004860 ORTHO05D006366 1.1e-94 350.5 217 79.7
TWI53G0789 Tripterygium wilfordii HOM05D004860 ORTHO05D006366 1.3e-93 347.1 205 81.5
ATR0626G115 Amborella trichopoda HOM05D004860 ORTHO05D006366 4.5e-91 338.6 199 82.4
Oeu017197.2 Olea europaea HOM05D004860 ORTHO05D006366 5.9e-91 338.2 228 74.6
SGA_v2.0_scaffold166G38376 Striga asiatica HOM05D004860 ORTHO05D006366 1.1e-89 334.0 197 82.2
SalBow2G3077 Salvia bowleyana HOM05D004860 ORTHO05D006366 1.7e-85 320.1 271 62.0
Sc13g0003950 Simmondsia chinensis HOM05D004860 ORTHO05D006366 5.9e-75 285.0 163 87.1
VMungo1215G0515 Vigna mungo HOM05D004860 ORTHO05D006366 9.7e-70 267.7 163 80.4
Eucgr.B01143 Eucalyptus grandis HOM05D004860 ORTHO05D006366 3.4e-62 242.7 153 73.2
Actinidia23474 Actinidia chinensis HOM05D004860 ORTHO05D006366 3.1e-60 236.1 265 51.3
SHI00370 Sapria himalayana HOM05D004860 ORTHO05D000023 3.1e-60 236.1 138 84.1
FAN17G0307 Fragaria x ananassa HOM05D004860 ORTHO05D006366 1.7e-58 230.3 139 77.7
Hund22791 Selenicereus undatus HOM05D004860 ORTHO05D006366 2.0e-51 206.8 132 73.5
HPP92_027344 Vanilla planifolia HOM05D004860 ORTHO05D006366 5.2e-47 192.2 114 80.7
VMungo1215G0712 Vigna mungo HOM05D004860 ORTHO05D006366 6.8e-47 191.8 108 82.4
Cc02_g31730 Coffea canephora HOM05D004860 ORTHO05D006366 2.7e-43 179.9 108 75.0
Nitab4.5_0002954g0030 Nicotiana tabacum HOM05D004860 ORTHO05D006366 8.6e-42 174.9 113 78.8
CBR_g23274 Chara braunii HOM05D004860 ORTHO05D006366 5.2e-39 165.6 129 59.7
PRCOL_00003006 Prasinoderma coloniale HOM05D004860 ORTHO05D006366 3.5e-35 152.9 282 39.7
Cc09_g08330 Coffea canephora HOM05D004860 ORTHO05D006366 8.1e-32 141.7 112 61.6
Cre06.g283034 Chlamydomonas reinhardtii HOM05D004860 ORTHO05D006366 3.2e-28 129.8 279 31.5
Cc01_g03740 Coffea canephora HOM05D004860 ORTHO05D006366 7.8e-27 125.2 117 54.7
Mapoly0174s0021 Marchantia polymorpha HOM05D004860 ORTHO05D006366 1.8e-23 114.0 84 65.5
DCAR_002416 Daucus carota HOM05D004860 ORTHO05D006366 1.2e-22 111.3 86 62.8
Cfa023854 Carpinus fangiana HOM05D004860 ORTHO05D126341 1.3e-21 107.8 287 30.7
SHI00369 Sapria himalayana HOM05D004860 ORTHO05D006366 7.1e-20 102.1 61 77.0
A02p05180 Brassica napus HOM05D004860 ORTHO05D006366 1.6e-19 100.9 92 59.8
BraA02t05478Z Brassica rapa HOM05D004860 ORTHO05D006366 2.1e-19 100.5 93 60.2
HPP92_027343 Vanilla planifolia HOM05D004860 ORTHO05D006366 6.0e-19 99.0 64 75.0
THA.LOC104820105 Tarenaya hassleriana HOM05D001530 ORTHO05D004168 8.1e-16 88.6 53 79.2
Lj6C565T4 Lonicera japonica HOM05D004860 ORTHO05D006366 4.0e-15 86.3 53 71.7
DCAR_030597 Daucus carota HOM05D004860 ORTHO05D006366 5.3e-15 85.9 52 75.0
Cc00_g00380 Coffea canephora HOM05D004860 ORTHO05D006366 1.3e-13 81.3 53 69.8
CBR_g23273 Chara braunii HOM05D004860 ORTHO05D006366 7.8e-11 72.0 61 50.8
Cc11_g00440 Coffea canephora HOM05D004860 ORTHO05D005444 9.6e-09 65.1 37 73.0
HPP92_017189 Vanilla planifolia HOM05D004860 ORTHO05D006366 3.1e-07 60.1 31 87.1


User provided reference genes

Program Settings