Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038213 Chenopodium quinoa HOM05D000520 ORTHO05D000399 8.2e-66 253.8 153 100.0
EL10Ac3g06363 Beta vulgaris HOM05D000520 ORTHO05D000399 1.2e-51 206.8 144 84.7
AUR62030091 Chenopodium quinoa HOM05D000520 ORTHO05D000399 1.8e-44 183.0 149 79.2
Hund12193 Selenicereus undatus HOM05D000520 ORTHO05D000399 4.4e-19 98.6 159 44.7
Manes.15G023400 Manihot esculenta HOM05D000520 ORTHO05D000399 1.7e-18 96.7 139 51.8
CSS0016617 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 1.4e-17 93.6 142 62.7
Nn1g02168 Nelumbo nucifera HOM05D000520 ORTHO05D000399 1.4e-17 93.6 138 47.1
Sed0010325 Sechium edule HOM05D000520 ORTHO05D000399 1.2e-16 90.5 119 51.3
MD16G1184300 Malus domestica HOM05D000520 ORTHO05D000399 1.6e-16 90.1 155 47.7
Glyma.07G257300 Glycine max HOM05D000520 ORTHO05D000399 2.7e-16 89.4 163 54.0
Dinv40265 Davidia involucrata HOM05D000520 ORTHO05D000399 4.6e-16 88.6 124 49.2
Glyma.17G016800 Glycine max HOM05D000520 ORTHO05D000399 4.6e-16 88.6 153 54.2
Prupe.1G151700 Prunus persica HOM05D000520 ORTHO05D000399 3.0e-15 85.9 155 43.9
Cfa015585 Carpinus fangiana HOM05D000520 ORTHO05D000399 3.9e-15 85.5 158 44.3
TAR633G0222 Trochodendron aralioides HOM05D002055 ORTHO05D002120 5.1e-15 85.1 156 45.5
Hma1.2p1_0511F.1_g169070 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 1.1e-14 84.0 170 55.9
TAR365G1251 Trochodendron aralioides HOM05D000520 ORTHO05D000399 1.1e-14 84.0 141 44.7
vmacro08281 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 1.1e-14 84.0 144 59.0
FvH4_4g14520 Fragaria vesca HOM05D000520 ORTHO05D000399 1.9e-14 83.2 155 41.3
FAN12G0085 Fragaria x ananassa HOM05D000520 ORTHO05D000399 1.9e-14 83.2 155 41.3
Hma1.2p1_1037F.1_g250580 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 1.9e-14 83.2 161 42.9
Dinv44482 Davidia involucrata HOM05D000520 ORTHO05D000399 3.3e-14 82.4 152 51.3
VMungo1215G0488 Vigna mungo HOM05D000520 ORTHO05D000399 3.3e-14 82.4 161 56.5
Cpa.g.sc16.22 Carica papaya HOM05D000520 ORTHO05D000399 4.3e-14 82.0 145 49.0
ECA240G2947 Erigeron canadensis HOM05D000520 ORTHO05D000399 4.3e-14 82.0 57 73.7
Lj3C779T2 Lonicera japonica HOM05D000520 ORTHO05D000399 4.3e-14 82.0 178 43.8
PGR004G1850 Punica granatum HOM05D000520 ORTHO05D000399 5.6e-14 81.6 144 48.6
QL03p004617 Quercus lobata HOM05D000520 ORTHO05D000399 1.2e-13 80.5 107 45.8
Rhsim04G0206800 Rhododendron simsii HOM05D000520 ORTHO05D000399 1.2e-13 80.5 166 53.6
Ciclev10004709m.g Citrus clementina HOM05D000520 ORTHO05D000399 2.1e-13 79.7 150 50.7
Phvul.003G092500 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 2.1e-13 79.7 173 48.6
Actinidia08516 Actinidia chinensis HOM05D000520 ORTHO05D000399 3.6e-13 79.0 55 74.5
Duzib212G0287 Durio zibethinus HOM05D000520 ORTHO05D000399 3.6e-13 79.0 163 41.7
Manes.08G122800 Manihot esculenta HOM05D000520 ORTHO05D000399 3.6e-13 79.0 129 45.7
Actinidia40190 Actinidia chinensis HOM05D000520 ORTHO05D000399 4.7e-13 78.6 117 47.9
Cc03_g03140 Coffea canephora HOM05D000520 ORTHO05D000399 6.2e-13 78.2 172 52.3
Haze_00959 Corylus avellana HOM05D000520 ORTHO05D000399 6.2e-13 78.2 161 44.1
Manes.09G164500 Manihot esculenta HOM05D000520 ORTHO05D000399 6.2e-13 78.2 105 48.6
QL03p004799 Quercus lobata HOM05D002900 ORTHO05D003238 8.1e-13 77.8 102 46.1
FAN22G0660 Fragaria x ananassa HOM05D000520 ORTHO05D000399 1.4e-12 77.0 158 40.5
Oeu042784.1 Olea europaea HOM05D000520 ORTHO05D000399 1.4e-12 77.0 147 43.5
arahy.Tifrunner.gnm1.ann1.J3K1ST Arachis hypogaea HOM05D000520 ORTHO05D000399 2.3e-12 76.3 159 42.1
Carub.0003s0556 Capsella rubella HOM05D000520 ORTHO05D000399 2.3e-12 76.3 154 40.3
arahy.Tifrunner.gnm1.ann1.KQD4NT Arachis hypogaea HOM05D000520 ORTHO05D000399 3.1e-12 75.9 159 42.1
DCAR_027154 Daucus carota HOM05D000520 ORTHO05D000399 3.1e-12 75.9 105 49.5
Manes.03G184400 Manihot esculenta HOM05D000520 ORTHO05D000399 3.1e-12 75.9 146 47.3
vmacro15303 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 3.1e-12 75.9 111 68.5
Aa31LG5G16650 Aethionema arabicum HOM05D000520 ORTHO05D000399 4.0e-12 75.5 139 49.6
Aqoxy2G03274 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 4.0e-12 75.5 139 43.2
AL3G16980 Arabidopsis lyrata HOM05D000520 ORTHO05D000399 4.0e-12 75.5 122 41.8
Psat4g031280 Pisum sativum HOM05D000520 ORTHO05D000399 4.0e-12 75.5 126 59.5
TAR636G3323 Trochodendron aralioides HOM05D000520 ORTHO05D000399 4.0e-12 75.5 58 69.0
FAN17G1094 Fragaria x ananassa HOM05D000520 ORTHO05D000399 5.2e-12 75.1 159 39.0
Sed0003129 Sechium edule HOM05D000520 ORTHO05D000399 5.2e-12 75.1 132 51.5
CsaV3_1G039090 Cucumis sativus L. HOM05D000520 ORTHO05D000399 6.8e-12 74.7 117 45.3
CSS0020567 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 8.9e-12 74.3 166 51.2
COL.COLO4_21650 Corchorus olitorius HOM05D000520 ORTHO05D000399 8.9e-12 74.3 164 53.7
Actinidia00088 Actinidia chinensis HOM05D000520 ORTHO05D000399 1.2e-11 73.9 154 50.6
Ca_00641_v3 Cicer arietinum L. HOM05D000520 ORTHO05D000399 1.2e-11 73.9 184 48.9
ClCG03G016850 Citrullus lanatus HOM05D000520 ORTHO05D000399 1.2e-11 73.9 128 44.5
Lsat_1_v5_gn_5_76560 Lactuca sativa HOM05D000520 ORTHO05D000399 1.2e-11 73.9 181 49.2
RcHm_v2.0_Chr4g0418311 Rosa chinensis HOM05D000520 ORTHO05D000399 1.2e-11 73.9 162 38.9
Glyma.15G104400 Glycine max HOM05D000520 ORTHO05D000399 2.0e-11 73.2 159 56.0
Sed0025184 Sechium edule HOM05D000520 ORTHO05D000399 2.0e-11 73.2 117 42.7
HanXRQChr10g0310421 Helianthus annuus HOM05D000520 ORTHO05D000399 2.6e-11 72.8 183 51.4
TAR362G0969 Trochodendron aralioides HOM05D000520 ORTHO05D000399 2.6e-11 72.8 100 48.0
Duzib151G0073 Durio zibethinus HOM05D000520 ORTHO05D000399 3.4e-11 72.4 152 40.8
Phvul.006G153400 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 3.4e-11 72.4 162 46.3
Gorai.006G054000 Gossypium raimondii HOM05D000520 ORTHO05D000399 4.4e-11 72.0 155 52.9
AT3G06130 Arabidopsis thaliana HOM05D000520 ORTHO05D000399 5.8e-11 71.6 143 44.1
Thhalv10013101m.g Eutrema salsugineum HOM05D000520 ORTHO05D000399 7.6e-11 71.2 155 48.4
Hma1.2p1_1362F.1_g278200 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 7.6e-11 71.2 171 39.8
CiPaw.07G015400 Carya illinoinensis HOM05D000520 ORTHO05D000399 9.9e-11 70.9 108 45.4
BolC5t34771H Brassica oleracea HOM05D000520 ORTHO05D000399 1.3e-10 70.5 160 43.1
Oeu060380.1 Olea europaea HOM05D000520 ORTHO05D000399 1.3e-10 70.5 173 40.5
Sp3g05080 Schrenkiella parvula HOM05D000520 ORTHO05D000399 1.3e-10 70.5 121 47.9
VMungo0540G0465 Vigna mungo HOM05D000520 ORTHO05D000399 1.3e-10 70.5 162 54.3
BraA02t05479Z Brassica rapa HOM05D000520 ORTHO05D000399 2.2e-10 69.7 157 43.3
ClCG06G005820 Citrullus lanatus HOM05D000520 ORTHO05D000399 2.2e-10 69.7 161 38.5
Glyma.13G208400 Glycine max HOM05D000520 ORTHO05D000399 2.2e-10 69.7 162 52.5
THA.LOC104822309 Tarenaya hassleriana HOM05D000520 ORTHO05D000399 2.2e-10 69.7 135 41.5
MBI17_g34453_MAGBIO Magnolia biondii HOM05D000520 ORTHO05D000399 2.9e-10 69.3 133 54.9
Thecc.04G222100 Theobroma cacao HOM05D000520 ORTHO05D000399 2.9e-10 69.3 151 50.3
DCAR_024583 Daucus carota HOM05D000520 ORTHO05D000399 3.8e-10 68.9 57 64.9
SalBow5G3772 Salvia bowleyana HOM05D000520 ORTHO05D000399 3.8e-10 68.9 137 59.9
Sp6g25290 Schrenkiella parvula HOM05D000520 ORTHO05D000399 3.8e-10 68.9 65 58.5
A02p05190 Brassica napus HOM05D000520 ORTHO05D000399 4.9e-10 68.6 166 42.2
ECA234G3541 Erigeron canadensis HOM05D000520 ORTHO05D000399 4.9e-10 68.6 171 50.3
FAN07G0772 Fragaria x ananassa HOM05D000520 ORTHO05D000399 4.9e-10 68.6 159 37.7
Lsat_1_v5_gn_7_68501 Lactuca sativa HOM05D000520 ORTHO05D000399 4.9e-10 68.6 57 68.4
Gohir.D09G053480 Gossypium hirsutum HOM05D000520 ORTHO05D000399 6.4e-10 68.2 157 51.6
C05p61130 Brassica napus HOM05D000520 ORTHO05D000399 8.4e-10 67.8 168 42.9
Sabra08G0158700 Salix brachista HOM05D000520 ORTHO05D000399 8.4e-10 67.8 119 47.9
Gohir.A09G054400 Gossypium hirsutum HOM05D000520 ORTHO05D000399 1.1e-09 67.4 150 52.7
TWI73G0943 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 1.1e-09 67.4 176 40.3
CiPaw.01G160300 Carya illinoinensis HOM05D000520 ORTHO05D000399 1.4e-09 67.0 109 57.8
PSO170G1749 Papaver somniferum HOM05D000520 ORTHO05D000399 1.4e-09 67.0 52 69.2
PSO407G0131 Papaver somniferum HOM05D000520 ORTHO05D000399 1.4e-09 67.0 52 69.2
Aa31LG11G10640 Aethionema arabicum HOM05D000520 ORTHO05D000399 1.9e-09 66.6 65 61.5
Medtr4g117140 Medicago truncatula HOM05D000520 ORTHO05D000399 1.9e-09 66.6 136 60.3
Oeu030984.1 Olea europaea HOM05D000520 ORTHO05D000399 1.9e-09 66.6 178 38.2
Potri.005G036300 Populus trichocarpa HOM05D000520 ORTHO05D000399 1.9e-09 66.6 120 42.5
MSTRG.21833 Avicennia marina HOM05D000520 ORTHO05D000399 2.4e-09 66.2 56 67.9
Carub.0006s1741 Capsella rubella HOM05D000520 ORTHO05D000399 2.4e-09 66.2 63 58.7
Migut.G00268 Erythranthe guttata HOM05D000520 ORTHO05D000399 2.4e-09 66.2 159 52.8
Eucgr.B01997 Eucalyptus grandis HOM05D000520 ORTHO05D000399 2.4e-09 66.2 50 68.0
BcaC03g13633 Brassica carinata HOM05D000520 ORTHO05D000399 3.2e-09 65.9 154 40.3
C02p10270 Brassica napus HOM05D000520 ORTHO05D000399 3.2e-09 65.9 154 40.3
BolC2t06934H Brassica oleracea HOM05D000520 ORTHO05D000399 3.2e-09 65.9 154 40.3
Lalb_Chr12g0196211 Lupinus albus HOM05D000520 ORTHO05D000399 3.2e-09 65.9 48 72.9
TWI56G1360 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 3.2e-09 65.9 106 45.3
Actinidia23612 Actinidia chinensis HOM05D000520 ORTHO05D000399 4.1e-09 65.5 127 41.7
PGR006G0001 Punica granatum HOM05D000520 ORTHO05D000399 4.1e-09 65.5 151 38.4
PGR083G1402 Punica granatum HOM05D000520 ORTHO05D000399 4.1e-09 65.5 151 38.4
A05p41870 Brassica napus HOM05D000520 ORTHO05D000399 5.4e-09 65.1 159 42.8
CSS0048661 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 5.4e-09 65.1 137 51.1
ECA247G2183 Erigeron canadensis HOM05D002957 ORTHO05D007941 5.4e-09 65.1 166 34.3
Atru.chr13.1890 Acer truncatum HOM05D000520 ORTHO05D000399 7.1e-09 64.7 186 37.1
BraA05t22906Z Brassica rapa HOM05D000520 ORTHO05D000399 7.1e-09 64.7 136 45.6
CsaV3_6G018600 Cucumis sativus L. HOM05D000520 ORTHO05D000399 7.1e-09 64.7 121 38.8
Dinv38396 Davidia involucrata HOM05D000520 ORTHO05D000399 7.1e-09 64.7 129 42.6
Oeu042424.1 Olea europaea HOM05D000520 ORTHO05D000399 7.1e-09 64.7 63 61.9
PGR031G0428 Punica granatum HOM05D000520 ORTHO05D000399 7.1e-09 64.7 51 66.7
CARHR080640 Cardamine hirsuta HOM05D000520 ORTHO05D000399 9.2e-09 64.3 169 43.2
Thhalv10020810m.g Eutrema salsugineum HOM05D000520 ORTHO05D000399 9.2e-09 64.3 132 48.5
Sabra13G0026500 Salix brachista HOM05D000520 ORTHO05D000399 9.2e-09 64.3 172 36.0
AL6G30480 Arabidopsis lyrata HOM05D000520 ORTHO05D000399 1.6e-08 63.5 67 55.2
BcaB05g23361 Brassica carinata HOM05D000520 ORTHO05D000399 1.6e-08 63.5 164 38.4
CARHR193900 Cardamine hirsuta HOM05D000520 ORTHO05D000399 1.6e-08 63.5 67 53.7
THA.LOC104802746 Tarenaya hassleriana HOM05D000520 ORTHO05D000399 1.6e-08 63.5 126 37.3
TWI12G0073 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 1.6e-08 63.5 112 44.6
MSTRG.24755 Avicennia marina HOM05D000520 ORTHO05D000399 2.1e-08 63.2 159 40.3
CANSAT78G1556 Cannabis sativa HOM05D000520 ORTHO05D000399 2.1e-08 63.2 54 68.5
Potri.013G025300 Populus trichocarpa HOM05D000520 ORTHO05D000399 2.1e-08 63.2 180 38.3
BcaB08g36614 Brassica carinata HOM05D000520 ORTHO05D000399 2.7e-08 62.8 65 55.4
Medtr4g117220 Medicago truncatula HOM05D000520 ORTHO05D000399 2.7e-08 62.8 139 58.3
SalBow5G3417 Salvia bowleyana HOM05D000520 ORTHO05D000399 2.7e-08 62.8 174 51.7
A10p20600 Brassica napus HOM05D000520 ORTHO05D000399 4.6e-08 62.0 65 52.3
BraA10t44122Z Brassica rapa HOM05D000520 ORTHO05D000399 4.6e-08 62.0 65 52.3
Sabra05G0036800 Salix brachista HOM05D000520 ORTHO05D000399 4.6e-08 62.0 51 64.7
Thecc.05G306700 Theobroma cacao HOM05D000520 ORTHO05D000399 4.6e-08 62.0 117 38.5
BcaC04g18611 Brassica carinata HOM05D000520 ORTHO05D000399 6.0e-08 61.6 65 52.3
C09p57300 Brassica napus HOM05D000520 ORTHO05D000399 6.0e-08 61.6 65 52.3
BolC9t58600H Brassica oleracea HOM05D000520 ORTHO05D000399 6.0e-08 61.6 65 52.3
Lj4g0000467 Lotus japonicus HOM05D000520 ORTHO05D000399 1.0e-07 60.8 159 47.8
RcHm_v2.0_Chr3g0454261 Rosa chinensis HOM05D000520 ORTHO05D000399 1.0e-07 60.8 53 58.5
AT5G19090 Arabidopsis thaliana HOM05D000520 ORTHO05D000399 1.3e-07 60.5 170 41.8
C03p42000 Brassica napus HOM05D000520 ORTHO05D000399 2.3e-07 59.7 189 35.4
Medtr2g022250 Medicago truncatula HOM05D000520 ORTHO05D000399 2.3e-07 59.7 149 51.0
SGA_v2.0_scaffold166G38370 Striga asiatica HOM05D000520 ORTHO05D000399 2.3e-07 59.7 168 49.4
QL06p004190 Quercus lobata HOM05D000520 ORTHO05D000399 3.0e-07 59.3 185 44.3
Cc00_g13310 Coffea canephora HOM05D000520 ORTHO05D000399 3.9e-07 58.9 156 37.8
COL.COLO4_13507 Corchorus olitorius HOM05D000416 ORTHO05D000322 3.9e-07 58.9 110 41.8
Psat1g183400 Pisum sativum HOM05D000520 ORTHO05D000399 3.9e-07 58.9 152 50.0
TWI09G0069 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 3.9e-07 58.9 144 46.5
Haze_04227 Corylus avellana HOM05D000520 ORTHO05D000399 6.6e-07 58.2 137 45.3
HanXRQChr12g0359381 Helianthus annuus HOM05D000520 ORTHO05D000399 6.6e-07 58.2 154 51.9
A03p34530 Brassica napus HOM05D000520 ORTHO05D000399 8.6e-07 57.8 114 43.0
FvH4_6g05480 Fragaria vesca HOM05D000520 ORTHO05D000399 8.6e-07 57.8 131 46.6
FAN14G3702 Fragaria x ananassa HOM05D000520 ORTHO05D000399 8.6e-07 57.8 131 46.6
FAN14G5262 Fragaria x ananassa HOM05D000520 ORTHO05D000399 8.6e-07 57.8 131 46.6
Atru.chr2.464 Acer truncatum HOM05D000520 ORTHO05D000399 1.1e-06 57.4 100 55.0
Lalb_Chr06g0167791 Lupinus albus HOM05D000520 ORTHO05D000399 1.1e-06 57.4 161 44.7
Potri.008G202800 Populus trichocarpa HOM05D000520 ORTHO05D000399 1.1e-06 57.4 170 45.3
TPR.G31404 Trifolium pratense HOM05D000520 ORTHO05D000399 1.1e-06 57.4 172 34.3
CSS0042599 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 1.9e-06 56.6 156 40.4
CANSAT54G1951 Cannabis sativa HOM05D000520 ORTHO05D000399 1.9e-06 56.6 135 55.6
Ciclev10000747m.g Citrus clementina HOM05D000520 ORTHO05D000399 1.9e-06 56.6 167 35.9
arahy.Tifrunner.gnm1.ann1.K1C9AI Arachis hypogaea HOM05D000520 ORTHO05D000399 2.5e-06 56.2 132 45.5
Gorai.004G242600 Gossypium raimondii HOM05D000520 ORTHO05D000399 2.5e-06 56.2 185 40.0
Psat0s1377g0160 Pisum sativum HOM05D000520 ORTHO05D000399 2.5e-06 56.2 116 55.2
SGA_v2.0_scaffold39G15363 Striga asiatica HOM05D000520 ORTHO05D000399 2.5e-06 56.2 126 47.6
BraA03t12630Z Brassica rapa HOM05D000520 ORTHO05D000399 3.3e-06 55.8 118 44.1
FAN09G4603 Fragaria x ananassa HOM05D000520 ORTHO05D000399 3.3e-06 55.8 53 52.8
CSS0050336 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 5.6e-06 55.1 155 38.7
Cpa.g.sc48.23 Carica papaya HOM05D000520 ORTHO05D000399 5.6e-06 55.1 137 47.4
CiPaw.02G092700 Carya illinoinensis HOM05D000520 ORTHO05D000399 5.6e-06 55.1 191 34.6
unitig_748.g8346 Utricularia gibba HOM05D000520 ORTHO05D000399 5.6e-06 55.1 167 38.3
Aa31LG5G15600 Aethionema arabicum HOM05D000520 ORTHO05D012153 7.3e-06 54.7 50 62.0
FAN02G0264 Fragaria x ananassa HOM05D000520 ORTHO05D000399 9.6e-06 54.3 53 50.9
FAN05G0808 Fragaria x ananassa HOM05D000520 ORTHO05D000399 9.6e-06 54.3 53 50.9
FAN05G4392 Fragaria x ananassa HOM05D000520 ORTHO05D000399 9.6e-06 54.3 53 50.9


User provided reference genes

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