Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62038019 Chenopodium quinoa HOM05D007885 ORTHO05D010052 2.6e-40 168.3 87 100.0
Ah.05g177170 Amaranthus hybridus HOM05D007885 ORTHO05D010052 4.9e-23 110.9 79 78.5
Sc23g0004750 Simmondsia chinensis HOM05D007885 ORTHO05D010052 3.6e-18 94.7 80 63.8
TWI34G1949 Tripterygium wilfordii HOM05D007885 ORTHO05D010052 2.4e-17 92.0 77 62.3
TAR629G0995 Trochodendron aralioides HOM05D007885 ORTHO05D010052 5.2e-17 90.9 84 63.1
Thecc.05G232100 Theobroma cacao HOM05D007885 ORTHO05D010052 4.4e-16 87.8 73 64.4
Rhsim07G0045900 Rhododendron simsii HOM05D007885 ORTHO05D010052 2.2e-15 85.5 78 57.7
GSVIVG01011323001 Vitis vinifera HOM05D007885 ORTHO05D010052 2.2e-15 85.5 79 60.8
Gohir.D13G100200 Gossypium hirsutum HOM05D007885 ORTHO05D010052 2.9e-15 85.1 73 61.6
Gorai.013G112400 Gossypium raimondii HOM05D007885 ORTHO05D010052 4.9e-15 84.3 74 60.8
Duzib177G0659 Durio zibethinus HOM05D007885 ORTHO05D010052 6.4e-15 84.0 73 58.9
Ciclev10033227m.g Citrus clementina HOM05D007885 ORTHO05D010052 1.1e-14 83.2 76 64.5
QL04p052580 Quercus lobata HOM05D007885 ORTHO05D010052 1.4e-14 82.8 56 75.0
Manes.08G157500 Manihot esculenta HOM05D007885 ORTHO05D010052 1.9e-14 82.4 76 59.2
Hma1.2p1_0353F.1_g133360 Hydrangea macrophylla HOM05D007885 ORTHO05D010052 2.4e-14 82.0 70 58.6
Actinidia05823 Actinidia chinensis HOM05D007885 ORTHO05D010052 4.2e-14 81.3 65 64.6
Cc02_g26380 Coffea canephora HOM05D007885 ORTHO05D010052 7.1e-14 80.5 59 67.8
Gohir.A13G081900 Gossypium hirsutum HOM05D007885 ORTHO05D010052 7.1e-14 80.5 74 59.5
Lj6g0000644 Lotus japonicus HOM05D007885 ORTHO05D010052 1.2e-13 79.7 81 56.8
CAN.G138.10 Capsicum annuum HOM05D007885 ORTHO05D010052 1.6e-13 79.3 79 53.2
Dinv43976 Davidia involucrata HOM05D007885 ORTHO05D010052 1.6e-13 79.3 68 63.2
Psat1g169600 Pisum sativum HOM05D007885 ORTHO05D010052 1.6e-13 79.3 56 67.9
Sed0017556 Sechium edule HOM05D007885 ORTHO05D010052 1.6e-13 79.3 79 59.5
Migut.B01442 Erythranthe guttata HOM05D007885 ORTHO05D010052 2.1e-13 79.0 71 59.2
Medtr2g029000 Medicago truncatula HOM05D007885 ORTHO05D010052 2.1e-13 79.0 56 67.9
FvH4_7g07270 Fragaria vesca HOM05D007885 ORTHO05D010052 3.5e-13 78.2 69 62.3
Lsat_1_v5_gn_3_26720 Lactuca sativa HOM05D007885 ORTHO05D010052 3.5e-13 78.2 58 67.2
ClCG06G008190 Citrullus lanatus HOM05D007885 ORTHO05D010052 6.0e-13 77.4 78 53.8
Dinv43531 Davidia involucrata HOM05D007885 ORTHO05D010052 6.0e-13 77.4 83 55.4
Glyma.15G127300 Glycine max HOM05D007885 ORTHO05D010052 1.0e-12 76.6 78 59.0
arahy.Tifrunner.gnm1.ann1.4X2HTN Arachis hypogaea HOM05D007885 ORTHO05D010052 1.3e-12 76.3 56 66.1
Solyc08g044345.1 Solanum lycopersicum HOM05D007885 ORTHO05D010052 1.3e-12 76.3 76 55.3
Nn1g02087 Nelumbo nucifera HOM05D007885 ORTHO05D010052 1.7e-12 75.9 60 65.0
Phvul.006G131300 Phaseolus vulgaris HOM05D007885 ORTHO05D010052 1.7e-12 75.9 77 55.8
Sopen08g013480 Solanum pennellii HOM05D007885 ORTHO05D010052 1.7e-12 75.9 75 53.3
TPR.G17523 Trifolium pratense HOM05D007885 ORTHO05D010052 3.0e-12 75.1 56 64.3
Oeu026138.2 Olea europaea HOM05D007885 ORTHO05D010052 6.6e-12 73.9 54 66.7
Aa31LG9G17960 Aethionema arabicum HOM05D007885 ORTHO05D010052 1.1e-11 73.2 73 53.4
CDE02G4204 Ceratophyllum demersum HOM05D007885 ORTHO05D010052 3.3e-11 71.6 77 57.1
HanXRQChr15g0465371 Helianthus annuus HOM05D007885 ORTHO05D010052 3.3e-11 71.6 65 55.4
Potri.013G072700 Populus trichocarpa HOM05D007885 ORTHO05D010052 3.3e-11 71.6 69 59.4
Lalb_Chr18g0057781 Lupinus albus HOM05D007885 ORTHO05D010052 4.3e-11 71.2 51 64.7
Sp1g36130 Schrenkiella parvula HOM05D007885 ORTHO05D010052 4.3e-11 71.2 74 55.4
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 4.3e-11 71.2 72 56.9
MD07G1078800 Malus domestica HOM05D007885 ORTHO05D010052 5.6e-11 70.9 82 51.2
MELO3C020379.2 Cucumis melo HOM05D007885 ORTHO05D010052 7.3e-11 70.5 81 51.9
ECA246G2713 Erigeron canadensis HOM05D007885 ORTHO05D010052 7.3e-11 70.5 77 51.9
Aqoxy3G02001 Aquilegia oxysepala HOM05D007885 ORTHO05D010052 9.6e-11 70.1 73 56.2
CsaV3_2G010950 Cucumis sativus L. HOM05D007885 ORTHO05D010052 9.6e-11 70.1 81 51.9
Lj7A558G43 Lonicera japonica HOM05D007885 ORTHO05D010052 1.3e-10 69.7 84 51.2
AT1G49245 Arabidopsis thaliana HOM05D007885 ORTHO05D010052 2.1e-10 68.9 68 55.9
AL1G56120 Arabidopsis lyrata HOM05D007885 ORTHO05D010052 3.6e-10 68.2 72 54.2
AL4G25080 Arabidopsis lyrata HOM05D007885 ORTHO05D010052 3.6e-10 68.2 72 54.2
RcHm_v2.0_Chr1g0337851 Rosa chinensis HOM05D007885 ORTHO05D010052 6.2e-10 67.4 61 62.3
Zm00001eb306480 Zea mays HOM05D007885 ORTHO05D010052 8.1e-10 67.0 79 49.4
HPP92_008354 Vanilla planifolia HOM05D007885 ORTHO05D010052 1.1e-09 66.6 79 50.6
CANSAT01G2257 Cannabis sativa HOM05D007885 ORTHO05D010052 1.4e-09 66.2 56 58.9
PGSC0003DMG400025196 Solanum tuberosum HOM05D007885 ORTHO05D010052 1.4e-09 66.2 64 54.7
RcHm_v2.0_Chr0c29g0501081 Rosa chinensis HOM05D007885 ORTHO05D010052 1.8e-09 65.9 62 59.7
Carub.0001s3844 Capsella rubella HOM05D007885 ORTHO05D010052 3.1e-09 65.1 76 57.9
CARHR039250 Cardamine hirsuta HOM05D007885 ORTHO05D010052 4.0e-09 64.7 72 52.8
Peaxi162Scf01343g00147 Petunia axillaris HOM05D007885 ORTHO05D010052 5.3e-09 64.3 64 54.7
Eucgr.E01767 Eucalyptus grandis HOM05D007885 ORTHO05D010052 9.0e-09 63.5 50 66.0
Thhalv10011900m.g Eutrema salsugineum HOM05D007885 ORTHO05D010052 9.0e-09 63.5 80 50.0
A08p04120 Brassica napus HOM05D007885 ORTHO05D010052 1.2e-08 63.2 71 53.5
BraA08t32437Z Brassica rapa HOM05D007885 ORTHO05D010052 1.2e-08 63.2 71 53.5
Sabra13G0062600 Salix brachista HOM05D007885 ORTHO05D010052 1.2e-08 63.2 57 54.4
vmacro13585 Vaccinium macrocarpon HOM05D007885 ORTHO05D010052 1.5e-08 62.8 115 40.0
C08p04310 Brassica napus HOM05D007885 ORTHO05D010052 2.0e-08 62.4 71 50.7
FvH4_7g07330 Fragaria vesca HOM05D007885 ORTHO05D010052 3.4e-08 61.6 49 65.3
BcaC07g37071 Brassica carinata HOM05D007885 ORTHO05D010052 4.4e-08 61.2 71 49.3
CARHR040050 Cardamine hirsuta HOM05D007885 ORTHO05D010052 4.4e-08 61.2 65 53.8
FAN01G2012 Fragaria x ananassa HOM05D007885 ORTHO05D010052 5.8e-08 60.8 55 60.0
BolC8t47235H Brassica oleracea HOM05D007885 ORTHO05D010052 3.8e-07 58.2 71 47.9
PSO782G0684 Papaver somniferum HOM05D007885 ORTHO05D010052 1.9e-06 55.8 52 42.3
RcHm_v2.0_Chr0c29g0501131 Rosa chinensis HOM05D007885 ORTHO05D010052 1.9e-06 55.8 47 63.8
PSO063G1811 Papaver somniferum HOM05D007885 ORTHO05D010052 2.4e-06 55.5 52 42.3
BcaB04g17354 Brassica carinata HOM05D007885 ORTHO05D010052 3.2e-06 55.1 73 45.2


User provided reference genes

Program Settings