Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 2.1e-224 781.9 379 100.0
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 3.4e-153 545.4 421 70.5
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 7.3e-132 474.6 278 86.0
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 2.6e-89 333.2 266 67.3
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 2.7e-86 323.2 313 53.7
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 2.8e-83 313.2 312 51.6
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 8.2e-83 311.6 359 49.6
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 1.4e-82 310.8 309 53.1
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 1.4e-82 310.8 308 52.9
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 1.8e-82 310.5 316 52.2
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 4.1e-82 309.3 308 53.6
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 5.3e-82 308.9 311 52.1
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 1.6e-81 307.4 314 53.2
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 2.0e-81 307.0 312 52.6
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 3.5e-81 306.2 307 53.1
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 1.7e-80 303.9 311 51.1
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 5.0e-80 302.4 310 51.3
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 3.2e-79 299.7 350 48.3
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 3.2e-79 299.7 309 51.1
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 1.2e-78 297.7 308 50.6
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 1.2e-78 297.7 350 47.7
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 1.2e-78 297.7 316 51.6
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 2.7e-78 296.6 310 51.9
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 6.1e-78 295.4 308 50.0
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 8.0e-78 295.0 308 50.3
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 1.4e-77 294.3 314 52.5
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 5.2e-77 292.4 305 51.1
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 2.6e-76 290.0 309 50.8
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 4.4e-76 289.3 303 51.2
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 7.5e-76 288.5 307 51.8
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 2.2e-75 287.0 316 47.8
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 2.2e-75 287.0 315 49.8
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.8e-75 285.8 296 51.7
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.8e-75 285.8 294 52.0
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 6.3e-75 285.4 289 51.2
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 8.2e-75 285.0 312 47.8
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 1.1e-74 284.6 314 50.3
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.1e-74 284.6 329 48.9
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 1.4e-74 284.3 363 46.3
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 1.8e-74 283.9 312 48.4
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 2.4e-74 283.5 340 46.5
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 7.0e-74 282.0 328 47.9
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 9.1e-74 281.6 308 49.7
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 1.2e-73 281.2 295 50.2
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 2.0e-73 280.4 291 51.2
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 2.0e-73 280.4 314 50.0
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 2.0e-73 280.4 346 46.2
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 2.7e-73 280.0 311 49.8
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 2.7e-73 280.0 309 49.8
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 3.5e-73 279.6 324 47.8
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 5.9e-73 278.9 365 45.5
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 1.3e-72 277.7 349 45.6
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 1.7e-72 277.3 301 49.8
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 2.2e-72 276.9 344 46.5
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 3.8e-72 276.2 311 49.2
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 3.8e-72 276.2 310 49.0
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 3.8e-72 276.2 310 48.7
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 8.5e-72 275.0 299 50.2
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.5e-71 274.2 289 51.6
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 1.9e-71 273.9 316 48.1
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.9e-71 273.9 320 47.2
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 9.4e-71 271.6 306 47.7
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 1.2e-70 271.2 304 48.7
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 1.2e-70 271.2 324 46.3
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 1.6e-70 270.8 297 49.5
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 1.6e-70 270.8 317 46.7
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 2.7e-70 270.0 305 49.2
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 3.6e-70 269.6 308 48.4
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 6.1e-70 268.9 313 48.6
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 1.0e-69 268.1 301 47.8
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 2.3e-69 266.9 308 47.4
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 3.0e-69 266.5 299 48.2
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 3.0e-69 266.5 309 45.6
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 5.2e-69 265.8 309 47.9
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 5.2e-69 265.8 309 47.9
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 5.2e-69 265.8 317 46.4
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 6.8e-69 265.4 303 48.5
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 1.2e-68 264.6 307 45.6
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 2.0e-68 263.8 298 48.0
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 2.6e-68 263.5 314 47.1
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 4.4e-68 262.7 301 49.8
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 9.8e-68 261.5 298 48.3
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 1.3e-67 261.2 301 48.5
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 6.3e-67 258.8 298 47.7
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 8.3e-67 258.5 294 48.0
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 1.1e-66 258.1 298 47.0
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 1.8e-66 257.3 331 43.8
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 7.0e-66 255.4 420 38.1
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 3.5e-65 253.1 301 46.5
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 7.7e-65 251.9 290 47.2
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 7.2e-63 245.4 292 46.6
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 4.0e-61 239.6 307 45.0
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 1.3e-56 224.6 323 38.1
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 2.1e-54 217.2 284 46.1
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 4.1e-50 203.0 278 42.4
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 7.3e-47 192.2 261 44.8
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 2.2e-43 180.6 256 43.0
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 1.9e-42 177.6 243 43.2
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 9.2e-42 175.3 179 50.3
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 1.6e-41 174.5 168 55.4
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 8.6e-40 168.7 251 41.0
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 7.3e-39 165.6 246 39.8
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 7.3e-39 165.6 179 48.6
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 2.1e-38 164.1 242 41.3
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 3.6e-38 163.3 252 40.5
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 8.1e-38 162.2 179 48.0
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 3.4e-36 156.8 181 47.0
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 2.7e-33 147.1 295 34.2
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 4.6e-33 146.4 309 35.6
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 3.0e-32 143.7 74 86.5
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 5.1e-32 142.9 99 68.7
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 6.6e-32 142.5 79 82.3
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 8.6e-32 142.1 79 81.0
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 1.5e-31 141.4 172 44.2
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.2e-30 138.3 165 47.9
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 2.8e-30 137.1 375 30.9
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 4.7e-30 136.3 325 32.9
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 6.2e-30 136.0 106 63.2
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.1e-29 135.2 271 34.7
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.2e-27 127.5 99 64.6
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 3.0e-24 117.1 215 36.3
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 1.7e-19 101.3 283 29.0
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 2.2e-19 100.9 54 85.2
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 1.4e-18 98.2 61 65.6
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 1.9e-18 97.8 82 53.7
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 9.3e-18 95.5 72 54.2
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 6.0e-17 92.8 139 41.0
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 1.3e-16 91.7 287 28.2
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 4.8e-14 83.2 123 42.3
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 9.9e-12 75.5 58 60.3
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 9.9e-12 75.5 130 35.4
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 1.9e-10 71.2 115 38.3
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 6.0e-09 66.2 117 41.0


User provided reference genes

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