Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037947 Chenopodium quinoa HOM05D000141 ORTHO05D138184 1.9e-93 345.9 183 100.0
AUR62037929 Chenopodium quinoa HOM05D000141 ORTHO05D001311 2.3e-67 259.2 199 72.4
AUR62042369 Chenopodium quinoa HOM05D000141 ORTHO05D001311 4.0e-67 258.5 199 71.9
Ah.06g187390 Amaranthus hybridus HOM05D000141 ORTHO05D001311 1.1e-35 154.1 205 51.2
EL10Ac4g08530 Beta vulgaris HOM05D000141 ORTHO05D001311 7.6e-34 147.9 205 49.8
Haze_08513 Corylus avellana HOM05D000141 ORTHO05D001311 7.1e-16 88.2 208 38.0
TAR512G0002 Trochodendron aralioides HOM05D000141 ORTHO05D001311 9.3e-16 87.8 198 37.9
COL.COLO4_07051 Corchorus olitorius HOM05D000141 ORTHO05D001311 3.0e-14 82.8 216 36.6
Cfa019444 Carpinus fangiana HOM05D000141 ORTHO05D001311 3.9e-14 82.4 207 37.7
Cc05_g10030 Coffea canephora HOM05D000141 ORTHO05D001311 1.1e-13 80.9 206 35.9
Gohir.D01G024000 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.1e-13 80.9 209 35.9
Gorai.002G032500 Gossypium raimondii HOM05D000141 ORTHO05D001311 1.1e-13 80.9 209 35.9
Nitab4.5_0000639g0260 Nicotiana tabacum HOM05D000141 ORTHO05D001311 1.5e-13 80.5 209 35.4
CiPaw.12G006000 Carya illinoinensis HOM05D000141 ORTHO05D001311 3.3e-13 79.3 210 36.7
Gohir.A01G036700 Gossypium hirsutum HOM05D000141 ORTHO05D001311 5.7e-13 78.6 209 34.9
Atru.chr2.1842 Acer truncatum HOM05D000141 ORTHO05D001311 9.7e-13 77.8 222 34.2
CsaV3_4G007670 Cucumis sativus L. HOM05D000141 ORTHO05D001311 9.7e-13 77.8 216 33.8
Nitab4.5_0000505g0070 Nicotiana tabacum HOM05D000141 ORTHO05D001311 9.7e-13 77.8 106 50.0
EL10Ac4g08528 Beta vulgaris HOM05D000141 ORTHO05D001311 1.6e-12 77.0 136 42.6
Sopen12g006620 Solanum pennellii HOM05D000141 ORTHO05D001311 1.6e-12 77.0 200 35.5
Cpa.g.sc229.5 Carica papaya HOM05D000141 ORTHO05D001311 2.2e-12 76.6 210 36.2
Sed0016222 Sechium edule HOM05D000141 ORTHO05D001311 2.8e-12 76.3 105 50.5
PGSC0003DMG401007845 Solanum tuberosum HOM05D000141 ORTHO05D001311 2.8e-12 76.3 212 34.4
Ciclev10018793m.g Citrus clementina HOM05D000141 ORTHO05D001311 6.3e-12 75.1 215 35.3
vmacro12029 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 8.2e-12 74.7 205 34.6
Manes.03G090900 Manihot esculenta HOM05D000141 ORTHO05D001311 1.1e-11 74.3 206 32.5
Prupe.4G144400 Prunus persica HOM05D000141 ORTHO05D001311 1.1e-11 74.3 188 36.7
Glyma.15G252800 Glycine max HOM05D000141 ORTHO05D001311 1.8e-11 73.6 212 34.4
RcHm_v2.0_Chr5g0027091 Rosa chinensis HOM05D000141 ORTHO05D001311 3.1e-11 72.8 110 46.4
Thecc.07G157900 Theobroma cacao HOM05D000141 ORTHO05D001311 3.1e-11 72.8 215 35.3
Glyma.08G174300 Glycine max HOM05D000141 ORTHO05D001311 4.1e-11 72.4 214 34.1
MD10G1197400 Malus domestica HOM05D000141 ORTHO05D001311 4.1e-11 72.4 220 35.0
VMungo1080G0426 Vigna mungo HOM05D000141 ORTHO05D001311 5.3e-11 72.0 213 34.3
MELO3C016173.2 Cucumis melo HOM05D000141 ORTHO05D001311 6.9e-11 71.6 216 34.3
Sabra11G0126100 Salix brachista HOM05D000141 ORTHO05D001311 6.9e-11 71.6 104 44.2
ClCG07G010630 Citrullus lanatus HOM05D000141 ORTHO05D001311 9.0e-11 71.2 217 32.7
FAN16G3344 Fragaria x ananassa HOM05D000141 ORTHO05D001311 9.0e-11 71.2 110 48.2
FAN25G3242 Fragaria x ananassa HOM05D000141 ORTHO05D001311 9.0e-11 71.2 110 48.2
Phvul.005G054500 Phaseolus vulgaris HOM05D000141 ORTHO05D001311 9.0e-11 71.2 212 33.5
Dinv26638 Davidia involucrata HOM05D000141 ORTHO05D001311 1.2e-10 70.9 200 37.0
CANSAT56G1181 Cannabis sativa HOM05D000141 ORTHO05D001311 1.5e-10 70.5 210 32.4
CANSAT56G4238 Cannabis sativa HOM05D000141 ORTHO05D001311 1.5e-10 70.5 210 32.4
FAN21G3407 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.5e-10 70.5 110 48.2
FvH4_3g16110 Fragaria vesca HOM05D000141 ORTHO05D001311 2.0e-10 70.1 110 47.3
FAN11G1205 Fragaria x ananassa HOM05D000141 ORTHO05D001311 2.0e-10 70.1 110 47.3
Medtr2g069950 Medicago truncatula HOM05D000141 ORTHO05D001311 2.6e-10 69.7 211 34.1
Potri.011G140000 Populus trichocarpa HOM05D000141 ORTHO05D001311 3.4e-10 69.3 103 44.7
Actinidia20594 Actinidia chinensis HOM05D000141 ORTHO05D001311 4.5e-10 68.9 109 49.5
Ca_03483_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001311 4.5e-10 68.9 108 49.1
Lj1C805T5 Lonicera japonica HOM05D000141 ORTHO05D001311 4.5e-10 68.9 197 35.5
Psat1g009760 Pisum sativum HOM05D000141 ORTHO05D001311 4.5e-10 68.9 208 32.2
Solyc12g011290.2 Solanum lycopersicum HOM05D000141 ORTHO05D001311 5.9e-10 68.6 106 47.2
Migut.M00669 Erythranthe guttata HOM05D000141 ORTHO05D001311 1.3e-09 67.4 203 35.5
Eucgr.F03192 Eucalyptus grandis HOM05D000141 ORTHO05D001311 1.3e-09 67.4 214 31.8
Lalb_Chr25g0285251 Lupinus albus HOM05D000141 ORTHO05D001311 1.3e-09 67.4 214 35.0
Rhsim06G0183600 Rhododendron simsii HOM05D000141 ORTHO05D001311 1.3e-09 67.4 205 34.1
MD05G1213600 Malus domestica HOM05D000141 ORTHO05D001311 2.2e-09 66.6 217 31.8
Nn3g20438 Nelumbo nucifera HOM05D000141 ORTHO05D001311 2.9e-09 66.2 106 44.3
Sed0022606 Sechium edule HOM05D000141 ORTHO05D001311 3.8e-09 65.9 105 45.7
Duzib213G0002 Durio zibethinus HOM05D000141 ORTHO05D001311 5.0e-09 65.5 199 33.7
THA.LOC104812281 Tarenaya hassleriana HOM05D000141 ORTHO05D001311 5.0e-09 65.5 203 33.0
BraA07t31399Z Brassica rapa HOM05D000141 ORTHO05D001311 8.5e-09 64.7 202 31.2
CAN.G164.4 Capsicum annuum HOM05D000141 ORTHO05D001311 8.5e-09 64.7 213 31.0
QL04p072968 Quercus lobata HOM05D000141 ORTHO05D001311 8.5e-09 64.7 215 34.9
CSS0044535 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001311 1.9e-08 63.5 195 34.4
A07p38380 Brassica napus HOM05D000141 ORTHO05D001311 2.5e-08 63.2 202 30.2
MSTRG.14999 Avicennia marina HOM05D000141 ORTHO05D001311 7.2e-08 61.6 105 44.8
arahy.Tifrunner.gnm1.ann1.RXP99Y Arachis hypogaea HOM05D000141 ORTHO05D001311 1.2e-07 60.8 216 34.3
BolC6t39689H Brassica oleracea HOM05D000141 ORTHO05D001311 1.2e-07 60.8 201 31.3
Potri.001G436200 Populus trichocarpa HOM05D000141 ORTHO05D001311 1.6e-07 60.5 56 58.9
SalBow8G4088 Salvia bowleyana HOM05D000141 ORTHO05D001311 1.6e-07 60.5 105 42.9
arahy.Tifrunner.gnm1.ann1.36GBYI Arachis hypogaea HOM05D000141 ORTHO05D001311 2.7e-07 59.7 216 33.8
Sp5g27340 Schrenkiella parvula HOM05D000141 ORTHO05D001311 2.7e-07 59.7 206 31.1
TWI38G2413 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 2.7e-07 59.7 201 33.3
Manes.15G101400 Manihot esculenta HOM05D000141 ORTHO05D001311 3.6e-07 59.3 219 31.5
PGR031G0118 Punica granatum HOM05D000141 ORTHO05D001311 6.1e-07 58.5 211 28.4
Lalb_Chr20g0108861 Lupinus albus HOM05D000141 ORTHO05D001311 7.9e-07 58.2 208 34.1
TAR624G0806 Trochodendron aralioides HOM05D000141 ORTHO05D001311 7.9e-07 58.2 56 58.9
BcaB05g24734 Brassica carinata HOM05D000141 ORTHO05D001311 2.3e-06 56.6 197 29.4
HanXRQChr10g0306651 Helianthus annuus HOM05D000141 ORTHO05D001311 5.1e-06 55.5 221 29.4
Lsat_1_v5_gn_5_121381 Lactuca sativa HOM05D000141 ORTHO05D001311 6.7e-06 55.1 211 30.3
BolC2t09016H Brassica oleracea HOM05D000141 ORTHO05D001311 8.8e-06 54.7 207 30.4


User provided reference genes

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