Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037910 Chenopodium quinoa HOM05D003994 ORTHO05D004957 5.5e-167 590.9 299 100.0
EL10Ac9g21377 Beta vulgaris HOM05D003994 ORTHO05D004957 6.0e-105 384.8 222 88.7
AUR62040162 Chenopodium quinoa HOM05D003994 ORTHO05D004957 4.5e-100 368.6 212 88.7
Ah.01g023020 Amaranthus hybridus HOM05D003994 ORTHO05D004957 7.1e-98 361.3 218 82.6
Hund16215 Selenicereus undatus HOM05D003994 ORTHO05D004957 8.2e-94 347.8 212 79.7
Sc08g0002910 Simmondsia chinensis HOM05D003994 ORTHO05D004957 7.7e-92 341.3 212 79.2
TWI79G1032 Tripterygium wilfordii HOM05D003994 ORTHO05D004957 7.2e-90 334.7 214 77.1
CANSAT25G2109 Cannabis sativa HOM05D003994 ORTHO05D004957 9.4e-90 334.3 215 76.7
CANSAT56G2628 Cannabis sativa HOM05D003994 ORTHO05D004957 6.7e-88 328.2 215 76.7
Nitab4.5_0001583g0200 Nicotiana tabacum HOM05D003994 ORTHO05D004957 4.3e-87 325.5 212 72.6
PGSC0003DMG401014852 Solanum tuberosum HOM05D003994 ORTHO05D004957 5.7e-87 325.1 212 73.1
Dinv41938 Davidia involucrata HOM05D003994 ORTHO05D004957 1.7e-86 323.6 212 73.6
Nitab4.5_0001225g0220 Nicotiana tabacum HOM05D003994 ORTHO05D004957 1.7e-86 323.6 212 72.2
Solyc08g005985.1 Solanum lycopersicum HOM05D003994 ORTHO05D004957 1.7e-86 323.6 212 72.6
Sopen08g001960 Solanum pennellii HOM05D003994 ORTHO05D004957 1.7e-86 323.6 212 72.6
Eucgr.I01421 Eucalyptus grandis HOM05D003994 ORTHO05D004957 4.8e-86 322.0 215 72.6
FvH4_2g13710 Fragaria vesca HOM05D003994 ORTHO05D004957 4.8e-86 322.0 217 74.2
Oeu061402.1 Olea europaea HOM05D003994 ORTHO05D004957 4.8e-86 322.0 211 73.5
RcHm_v2.0_Chr7g0224781 Rosa chinensis HOM05D003994 ORTHO05D004957 6.3e-86 321.6 217 73.7
TAR376G0382 Trochodendron aralioides HOM05D003994 ORTHO05D004957 6.3e-86 321.6 213 75.6
CiPaw.06G111900 Carya illinoinensis HOM05D003994 ORTHO05D004957 1.1e-85 320.9 213 73.7
Haze_02136 Corylus avellana HOM05D003994 ORTHO05D004957 1.1e-85 320.9 210 72.9
HanXRQChr16g0514761 Helianthus annuus HOM05D003994 ORTHO05D004957 1.1e-85 320.9 213 74.2
A08p24160 Brassica napus HOM05D003994 ORTHO05D004957 1.4e-85 320.5 213 71.8
Cfa005247 Carpinus fangiana HOM05D003994 ORTHO05D004957 1.4e-85 320.5 210 72.9
SGA_v2.0_scaffold16G07672 Striga asiatica HOM05D003994 ORTHO05D004957 1.4e-85 320.5 212 73.6
FAN20G1157 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.8e-85 320.1 217 73.7
HanXRQChr10g0295951 Helianthus annuus HOM05D003994 ORTHO05D004957 1.8e-85 320.1 213 72.8
Oeu005708.1 Olea europaea HOM05D003994 ORTHO05D004957 1.8e-85 320.1 211 73.9
BcaC01g00237 Brassica carinata HOM05D003994 ORTHO05D004957 2.4e-85 319.7 210 72.9
CAN.G940.12 Capsicum annuum HOM05D003994 ORTHO05D004957 2.4e-85 319.7 212 72.2
Rhsim12G0069500 Rhododendron simsii HOM05D003994 ORTHO05D004957 3.1e-85 319.3 213 73.2
MD05G1122300 Malus domestica HOM05D003994 ORTHO05D004957 4.1e-85 318.9 217 74.2
CSS0048612 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 5.3e-85 318.5 212 72.2
CiPaw.05G082400 Carya illinoinensis HOM05D003994 ORTHO05D004957 5.3e-85 318.5 207 73.9
FvH4_2g14000 Fragaria vesca HOM05D003994 ORTHO05D004957 5.3e-85 318.5 217 73.3
Prupe.7G263800 Prunus persica HOM05D003994 ORTHO05D004957 5.3e-85 318.5 217 73.7
GSVIVG01024019001 Vitis vinifera HOM05D003994 ORTHO05D004957 5.3e-85 318.5 213 74.6
FAN27G1606 Fragaria x ananassa HOM05D003994 ORTHO05D004957 9.1e-85 317.8 217 73.3
SGA_v2.0_scaffold3G01602 Striga asiatica HOM05D003994 ORTHO05D004957 9.1e-85 317.8 212 72.2
Migut.N01321 Erythranthe guttata HOM05D003994 ORTHO05D004957 1.2e-84 317.4 212 73.1
Rhsim05G0056700 Rhododendron simsii HOM05D003994 ORTHO05D004957 1.2e-84 317.4 213 72.3
BraA08t34371Z Brassica rapa HOM05D003994 ORTHO05D004957 1.5e-84 317.0 212 70.8
MD10G1124800 Malus domestica HOM05D003994 ORTHO05D004957 1.5e-84 317.0 211 74.4
CSS0002177 Camellia sinensis var. sinensis HOM05D003994 ORTHO05D004957 2.0e-84 316.6 212 71.7
ECA234G2975 Erigeron canadensis HOM05D003994 ORTHO05D004957 2.0e-84 316.6 213 72.8
Hma1.2p1_0163F.1_g072490 Hydrangea macrophylla HOM05D003994 ORTHO05D004957 2.0e-84 316.6 202 75.7
TAR629G0599 Trochodendron aralioides HOM05D003994 ORTHO05D004957 2.0e-84 316.6 213 74.6
BcaB05g24329 Brassica carinata HOM05D003994 ORTHO05D004957 2.6e-84 316.2 211 71.1
Actinidia00624 Actinidia chinensis HOM05D003994 ORTHO05D004957 3.4e-84 315.8 227 69.2
A07p32200 Brassica napus HOM05D003994 ORTHO05D004957 3.4e-84 315.8 211 71.1
BolC2t08504H Brassica oleracea HOM05D003994 ORTHO05D004957 3.4e-84 315.8 211 70.6
BcaB03g15393 Brassica carinata HOM05D003994 ORTHO05D004957 5.9e-84 315.1 211 70.6
MSTRG.27636 Avicennia marina HOM05D003994 ORTHO05D004957 7.7e-84 314.7 212 71.7
Thhalv10019092m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 7.7e-84 314.7 211 71.1
AT4G38570 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 1.0e-83 314.3 210 71.4
Sed0013006 Sechium edule HOM05D003994 ORTHO05D004957 1.3e-83 313.9 215 72.6
EL10Ac7g18178 Beta vulgaris HOM05D003994 ORTHO05D004957 1.7e-83 313.5 212 76.9
BcaB03g15140 Brassica carinata HOM05D003994 ORTHO05D004957 1.7e-83 313.5 211 69.2
Aa31LG6G16590 Aethionema arabicum HOM05D003994 ORTHO05D004957 2.2e-83 313.2 210 71.4
CARHR060640 Cardamine hirsuta HOM05D003994 ORTHO05D004957 2.2e-83 313.2 211 69.7
Manes.04G058800 Manihot esculenta HOM05D003994 ORTHO05D004957 2.2e-83 313.2 215 71.6
Sp5g23020 Schrenkiella parvula HOM05D003994 ORTHO05D004957 2.2e-83 313.2 211 70.1
Aqoxy1G00146 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 2.9e-83 312.8 215 72.1
AT1G68000 Arabidopsis thaliana HOM05D003994 ORTHO05D004957 2.9e-83 312.8 211 70.1
Lsat_1_v5_gn_8_167161 Lactuca sativa HOM05D003994 ORTHO05D004957 2.9e-83 312.8 213 72.8
Sed0021478 Sechium edule HOM05D003994 ORTHO05D004957 2.9e-83 312.8 214 72.4
AL2G26920 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 3.8e-83 312.4 211 69.7
BcaC03g14900 Brassica carinata HOM05D003994 ORTHO05D004957 3.8e-83 312.4 211 69.7
Carub.0002s1448 Capsella rubella HOM05D003994 ORTHO05D004957 3.8e-83 312.4 211 69.7
Sp7g37200 Schrenkiella parvula HOM05D003994 ORTHO05D004957 5.0e-83 312.0 210 70.5
Aqoxy4G01712 Aquilegia oxysepala HOM05D003994 ORTHO05D004957 6.5e-83 311.6 215 71.6
THA.LOC104824762 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 6.5e-83 311.6 215 69.3
Thhalv10026160m.g Eutrema salsugineum HOM05D003994 ORTHO05D004957 8.5e-83 311.2 215 69.8
CsaV3_2G016120 Cucumis sativus L. HOM05D003994 ORTHO05D004957 1.1e-82 310.8 215 72.1
Duzib052G1000 Durio zibethinus HOM05D003994 ORTHO05D004957 1.9e-82 310.1 214 70.6
Glyma.11G091200 Glycine max HOM05D003994 ORTHO05D004957 1.9e-82 310.1 214 73.8
C06p37970 Brassica napus HOM05D003994 ORTHO05D004957 2.5e-82 309.7 211 70.1
Duzib248G0985 Durio zibethinus HOM05D003994 ORTHO05D004957 2.5e-82 309.7 214 71.5
PGR042G1915 Punica granatum HOM05D003994 ORTHO05D004957 3.2e-82 309.3 208 72.1
Atru.chr5.3321 Acer truncatum HOM05D003994 ORTHO05D004957 5.5e-82 308.5 212 72.6
BcaC08g46004 Brassica carinata HOM05D003994 ORTHO05D004957 5.5e-82 308.5 211 70.1
Nn3g20343 Nelumbo nucifera HOM05D003994 ORTHO05D004957 5.5e-82 308.5 202 75.2
BolC6t38896H Brassica oleracea HOM05D003994 ORTHO05D004957 1.2e-81 307.4 211 69.7
COL.COLO4_17341 Corchorus olitorius HOM05D003994 ORTHO05D004957 1.2e-81 307.4 209 71.8
Potri.004G175600 Populus trichocarpa HOM05D003994 ORTHO05D004957 1.2e-81 307.4 208 72.6
Lalb_Chr01g0001921 Lupinus albus HOM05D003994 ORTHO05D004957 2.1e-81 306.6 209 72.2
DCAR_025322 Daucus carota HOM05D003994 ORTHO05D004957 2.7e-81 306.2 203 73.4
Potri.009G135500 Populus trichocarpa HOM05D003994 ORTHO05D004957 2.7e-81 306.2 209 73.2
Lalb_Chr03g0025191 Lupinus albus HOM05D003994 ORTHO05D004957 6.1e-81 305.1 215 70.2
PSO017G2109 Papaver somniferum HOM05D003994 ORTHO05D004957 7.9e-81 304.7 212 69.3
PSO675G5603 Papaver somniferum HOM05D003994 ORTHO05D004957 7.9e-81 304.7 212 69.3
Ca_19074_v3 Cicer arietinum L. HOM05D003994 ORTHO05D004957 1.4e-80 303.9 215 69.8
Phvul.011G036100 Phaseolus vulgaris HOM05D003994 ORTHO05D004957 6.7e-80 301.6 202 73.3
Gorai.002G198300 Gossypium raimondii HOM05D003994 ORTHO05D004957 8.8e-80 301.2 209 69.4
ClCG02G011950 Citrullus lanatus HOM05D003994 ORTHO05D004957 1.1e-79 300.8 230 68.3
Thecc.02G059800 Theobroma cacao HOM05D003994 ORTHO05D004957 1.1e-79 300.8 214 69.6
TPR.G38794 Trifolium pratense HOM05D003994 ORTHO05D004957 1.5e-79 300.4 216 69.9
Medtr4g073020 Medicago truncatula HOM05D003994 ORTHO05D004957 2.0e-79 300.1 215 68.8
TPR.G39214 Trifolium pratense HOM05D003994 ORTHO05D004957 2.0e-79 300.1 215 69.3
Gohir.A01G168900 Gossypium hirsutum HOM05D003994 ORTHO05D004957 2.6e-79 299.7 212 69.3
Lalb_Chr19g0139051 Lupinus albus HOM05D003994 ORTHO05D004957 7.4e-79 298.1 210 70.5
Psat7g138440 Pisum sativum HOM05D003994 ORTHO05D004957 9.7e-79 297.7 209 69.9
vmacro17345 Vaccinium macrocarpon HOM05D003994 ORTHO05D004957 1.3e-78 297.4 193 75.6
Gohir.D01G159750 Gossypium hirsutum HOM05D003994 ORTHO05D004957 1.7e-78 297.0 209 68.9
C02p23750 Brassica napus HOM05D003994 ORTHO05D004957 3.7e-78 295.8 195 72.8
Carub.0007s0044 Capsella rubella HOM05D003994 ORTHO05D004957 4.8e-78 295.4 210 68.6
QL11p050712 Quercus lobata HOM05D003994 ORTHO05D004957 9.1e-77 291.2 209 67.5
CARHR294300 Cardamine hirsuta HOM05D003994 ORTHO05D004957 1.2e-76 290.8 192 73.4
A02p14650 Brassica napus HOM05D003994 ORTHO05D004957 2.6e-76 289.7 198 71.2
BraA02t06532Z Brassica rapa HOM05D003994 ORTHO05D004957 2.6e-76 289.7 198 71.2
C03p77150 Brassica napus HOM05D003994 ORTHO05D004957 4.5e-76 288.9 191 73.8
SalBow3G1772 Salvia bowleyana HOM05D003994 ORTHO05D004957 5.9e-76 288.5 192 73.4
FAN24G3352 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.0e-75 287.7 217 67.7
Cc09_g07710 Coffea canephora HOM05D003994 ORTHO05D004957 2.2e-75 286.6 208 67.3
Lsat_1_v5_gn_5_108021 Lactuca sativa HOM05D003994 ORTHO05D004957 2.9e-75 286.2 186 76.3
FAN15G2236 Fragaria x ananassa HOM05D003994 ORTHO05D004957 5.0e-75 285.4 217 67.3
HPP92_004513 Vanilla planifolia HOM05D003994 ORTHO05D004957 6.5e-75 285.0 210 65.2
VMungo1127G1708 Vigna mungo HOM05D003994 ORTHO05D004957 8.5e-75 284.6 192 71.9
A07p34510 Brassica napus HOM05D003994 ORTHO05D004957 1.9e-74 283.5 193 71.5
Dinv43046 Davidia involucrata HOM05D003225 ORTHO05D003818 2.5e-74 283.1 202 69.3
Glyma.12G033500 Glycine max HOM05D003994 ORTHO05D004957 3.2e-74 282.7 190 74.2
MELO3C020821.2 Cucumis melo HOM05D003994 ORTHO05D004957 2.1e-73 280.0 214 67.3
Lj3g0010701 Lotus japonicus HOM05D003994 ORTHO05D004957 2.7e-73 279.6 196 71.4
unitig_749.g13986 Utricularia gibba HOM05D003994 ORTHO05D004957 1.8e-72 276.9 192 68.2
PGR142G1861 Punica granatum HOM05D003994 ORTHO05D004957 2.3e-72 276.6 215 64.7
FAN24G0721 Fragaria x ananassa HOM05D003994 ORTHO05D004957 3.9e-72 275.8 253 58.9
Sabra04G0117500 Salix brachista HOM05D003994 ORTHO05D004957 3.3e-71 272.7 213 64.3
Os02g0123600 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D004957 5.7e-71 271.9 212 61.3
Zm00001eb274200 Zea mays HOM05D003994 ORTHO05D004957 2.2e-70 270.0 204 63.2
Sabra09G0105200 Salix brachista HOM05D003994 ORTHO05D004957 2.6e-68 263.1 230 59.6
ATR0307G066 Amborella trichopoda HOM05D003994 ORTHO05D004957 4.5e-68 262.3 214 60.3
CDE05G3005 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 1.3e-67 260.8 212 62.3
arahy.Tifrunner.gnm1.ann1.VZUK08 Arachis hypogaea HOM05D003994 ORTHO05D004957 4.7e-65 252.3 215 62.3
MBI02_g21865_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 2.0e-63 246.9 213 62.0
arahy.Tifrunner.gnm1.ann1.L07Y4L Arachis hypogaea HOM05D003994 ORTHO05D004957 2.2e-62 243.4 208 61.1
SGA_v2.0_scaffold243G44305 Striga asiatica HOM05D003994 ORTHO05D004957 2.2e-62 243.4 231 57.1
SHI32381 Sapria himalayana HOM05D003994 ORTHO05D004957 1.1e-61 241.1 176 68.8
Peaxi162Scf00045g00144 Petunia axillaris HOM05D003994 ORTHO05D004957 4.1e-61 239.2 212 58.0
arahy.Tifrunner.gnm1.ann1.U045QQ Arachis hypogaea HOM05D003994 ORTHO05D004957 1.3e-59 234.2 163 71.8
SalBow3G2361 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.7e-59 233.8 220 58.2
Mapoly0071s0023 Marchantia polymorpha HOM05D003994 ORTHO05D004957 1.2e-57 227.6 203 56.7
CDE05G1389 Ceratophyllum demersum HOM05D003994 ORTHO05D004957 6.1e-57 225.3 212 57.5
BolC6t39228H Brassica oleracea HOM05D000212 ORTHO05D005509 2.3e-56 223.4 183 66.7
Lj5C178T13 Lonicera japonica HOM05D003994 ORTHO05D004957 2.3e-56 223.4 149 73.8
C03p25490 Brassica napus HOM05D003994 ORTHO05D004957 4.0e-56 222.6 148 75.0
SMO112G0024 Selaginella moellendorffii HOM05D003994 ORTHO05D004957 1.5e-55 220.7 203 57.1
Zm00001eb389940 Zea mays HOM05D003994 ORTHO05D004957 1.3e-54 217.6 204 55.9
BolC3t19967H Brassica oleracea HOM05D003994 ORTHO05D004957 2.8e-54 216.5 193 59.6
Cpa.g.sc37.130 Carica papaya HOM05D003994 ORTHO05D004957 1.3e-51 207.6 139 74.1
Pp3c4_10100 Physcomitrium patens HOM05D003994 ORTHO05D004957 2.3e-51 206.8 213 52.1
Pp3c3_18340 Physcomitrium patens HOM05D003994 ORTHO05D004957 1.2e-49 201.1 227 49.8
CBR_g32608 Chara braunii HOM05D003994 ORTHO05D004957 1.8e-48 197.2 216 50.5
SalBow5G5214 Salvia bowleyana HOM05D003994 ORTHO05D004957 1.8e-48 197.2 175 61.7
C06p42000 Brassica napus HOM05D000573 ORTHO05D005509 1.3e-43 181.0 215 54.9
FAN15G2231 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.3e-43 181.0 148 63.5
Cre10.g419800 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D004957 1.2e-41 174.5 153 58.2
BcaC08g46226 Brassica carinata HOM05D003994 ORTHO05D004957 3.7e-38 162.9 113 69.9
MBI11_g13142_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 1.9e-37 160.6 232 42.7
MCO09G063 Micromonas commoda HOM05D003994 ORTHO05D004957 1.9e-34 150.6 230 42.6
PRCOL_00004558 Prasinoderma coloniale HOM05D003994 ORTHO05D004957 1.9e-34 150.6 154 51.3
arahy.Tifrunner.gnm1.ann1.8L0F4Y Arachis hypogaea HOM05D003994 ORTHO05D004957 8.9e-32 141.7 99 68.7
BcaNung05108 Brassica carinata HOM05D003994 ORTHO05D004957 1.1e-29 134.8 115 61.7
AL7G10460 Arabidopsis lyrata HOM05D003994 ORTHO05D004957 7.8e-28 128.6 94 64.9
FAN27G1783 Fragaria x ananassa HOM05D003994 ORTHO05D004957 1.5e-26 124.4 114 58.8
arahy.Tifrunner.gnm1.ann1.NCR277 Arachis hypogaea HOM05D003994 ORTHO05D004957 1.9e-26 124.0 99 62.6
Cfa022653 Carpinus fangiana HOM05D003994 ORTHO05D004957 7.3e-26 122.1 156 42.3
RcHm_v2.0_Chr5g0023251 Rosa chinensis HOM05D003994 ORTHO05D004957 1.4e-24 117.9 78 74.4
MD08G1201300 Malus domestica HOM05D003994 ORTHO05D036609 1.9e-18 97.4 79 59.5
MD16G1270800 Malus domestica HOM05D003994 ORTHO05D036609 2.4e-16 90.5 83 60.2
Pp3c10_9870 Physcomitrium patens HOM05D003994 ORTHO05D310819 7.6e-15 85.5 196 30.1
THA.LOC104807810 Tarenaya hassleriana HOM05D003994 ORTHO05D004957 3.3e-10 70.1 44 70.5
Os06g0492000 Oryza sativa ssp. japonica HOM05D003994 ORTHO05D036609 1.1e-08 65.1 40 65.0
MBI11_g33763_MAGBIO Magnolia biondii HOM05D003994 ORTHO05D004957 1.2e-07 61.6 60 51.7
Cre03.g204751 Chlamydomonas reinhardtii HOM05D003994 ORTHO05D043992 1.3e-06 58.2 82 39.0
CBR_g3510 Chara braunii HOM05D003994 ORTHO05D043992 6.4e-06 55.8 68 39.7


User provided reference genes

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