Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037894 Chenopodium quinoa HOM05D001312 ORTHO05D008018 1.6e-121 439.5 227 100.0
EL10Ac7g16768 Beta vulgaris HOM05D001312 ORTHO05D008018 3.8e-83 312.0 289 59.9
AUR62033601 Chenopodium quinoa HOM05D001312 ORTHO05D008018 7.1e-82 307.8 167 92.8
Hund20444 Selenicereus undatus HOM05D001312 ORTHO05D008018 2.3e-64 249.6 285 50.2
Prupe.7G120300 Prunus persica HOM05D001312 ORTHO05D008018 1.5e-63 246.9 286 48.3
RcHm_v2.0_Chr3g0471781 Rosa chinensis HOM05D001312 ORTHO05D008018 1.9e-63 246.5 284 48.9
Nn6g35083 Nelumbo nucifera HOM05D001312 ORTHO05D008018 5.7e-63 245.0 257 52.1
TAR633G1314 Trochodendron aralioides HOM05D001312 ORTHO05D001832 1.3e-62 243.8 286 48.3
FvH4_6g17520 Fragaria vesca HOM05D001312 ORTHO05D008018 6.9e-61 238.0 284 48.2
Medtr1g061560 Medicago truncatula HOM05D001312 ORTHO05D008018 1.5e-60 236.9 287 46.7
CSS0009438 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 2.0e-60 236.5 286 47.6
CSS0027895 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 2.0e-60 236.5 286 47.6
Eucgr.A01566 Eucalyptus grandis HOM05D001312 ORTHO05D008018 2.6e-60 236.1 286 45.5
FAN09G2766 Fragaria x ananassa HOM05D001312 ORTHO05D008018 3.4e-60 235.7 293 47.4
Migut.J00495 Erythranthe guttata HOM05D001312 ORTHO05D008018 5.9e-60 235.0 287 47.0
Potri.016G095900 Populus trichocarpa HOM05D001312 ORTHO05D008018 5.9e-60 235.0 284 47.2
Cpa.g.sc5.99 Carica papaya HOM05D001312 ORTHO05D008018 7.7e-60 234.6 285 46.7
Lj5g0006635 Lotus japonicus HOM05D001312 ORTHO05D008018 7.7e-60 234.6 289 47.4
TPR.G5684 Trifolium pratense HOM05D001312 ORTHO05D008018 1.3e-59 233.8 287 45.6
MD14G1093900 Malus domestica HOM05D001312 ORTHO05D008018 2.2e-59 233.0 284 46.5
TWI53G1380 Tripterygium wilfordii HOM05D001312 ORTHO05D008018 2.2e-59 233.0 286 45.1
CiPaw.09G007400 Carya illinoinensis HOM05D001312 ORTHO05D008018 2.9e-59 232.6 287 46.7
Phvul.007G224100 Phaseolus vulgaris HOM05D001312 ORTHO05D008018 2.9e-59 232.6 287 46.7
PGSC0003DMG400028176 Solanum tuberosum HOM05D001312 ORTHO05D008018 3.8e-59 232.3 285 46.7
FAN14G3191 Fragaria x ananassa HOM05D001312 ORTHO05D008018 5.0e-59 231.9 293 46.8
Ah.15g091190 Amaranthus hybridus HOM05D001312 ORTHO05D008018 1.9e-58 229.9 242 54.1
Gohir.D04G105500 Gossypium hirsutum HOM05D001312 ORTHO05D008018 1.9e-58 229.9 285 45.6
Actinidia39872 Actinidia chinensis HOM05D001312 ORTHO05D008018 4.2e-58 228.8 288 46.5
Cc06_g05050 Coffea canephora HOM05D001312 ORTHO05D008018 4.2e-58 228.8 291 46.0
CiPaw.10G004200 Carya illinoinensis HOM05D001312 ORTHO05D008018 5.5e-58 228.4 286 46.2
CANSAT80G2114 Cannabis sativa HOM05D001312 ORTHO05D008018 9.4e-58 227.6 285 47.0
Gorai.009G409200 Gossypium raimondii HOM05D001312 ORTHO05D008018 1.6e-57 226.9 285 45.3
Aqoxy1G00967 Aquilegia oxysepala HOM05D001312 ORTHO05D008018 2.7e-57 226.1 287 46.7
arahy.Tifrunner.gnm1.ann1.42C0B0 Arachis hypogaea HOM05D001312 ORTHO05D008018 3.6e-57 225.7 276 46.7
arahy.Tifrunner.gnm1.ann1.C1UQYX Arachis hypogaea HOM05D001312 ORTHO05D008018 3.6e-57 225.7 276 46.7
FAN05G3053 Fragaria x ananassa HOM05D001312 ORTHO05D008018 3.6e-57 225.7 293 45.7
Thecc.05G079000 Theobroma cacao HOM05D001312 ORTHO05D008018 4.6e-57 225.3 286 44.1
Glyma.10G065300 Glycine max HOM05D001312 ORTHO05D008018 7.9e-57 224.6 285 46.3
FAN05G0775 Fragaria x ananassa HOM05D001312 ORTHO05D008018 1.0e-56 224.2 293 45.4
VMungo0720G0477 Vigna mungo HOM05D001312 ORTHO05D008018 1.4e-56 223.8 286 45.5
Zm00001eb147410 Zea mays HOM05D001312 ORTHO05D008018 3.9e-56 222.2 276 43.5
Atru.BG.216.p Acer truncatum HOM05D001312 ORTHO05D008018 5.1e-56 221.9 282 46.8
Aa31LG1G21490 Aethionema arabicum HOM05D001312 ORTHO05D008018 5.1e-56 221.9 281 44.8
MSTRG.5801 Avicennia marina HOM05D001312 ORTHO05D008018 5.1e-56 221.9 287 44.6
Nitab4.5_0004490g0050 Nicotiana tabacum HOM05D001312 ORTHO05D008018 6.7e-56 221.5 314 43.0
COL.COLO4_22294 Corchorus olitorius HOM05D001312 ORTHO05D008018 8.8e-56 221.1 286 44.4
Psat6g076240 Pisum sativum HOM05D001312 ORTHO05D008018 2.5e-55 219.5 263 47.9
A10p32330 Brassica napus HOM05D001312 ORTHO05D008018 3.3e-55 219.2 284 44.0
BolC9t60051H Brassica oleracea HOM05D001312 ORTHO05D008018 3.3e-55 219.2 284 44.4
BraA10t45274Z Brassica rapa HOM05D001312 ORTHO05D008018 3.3e-55 219.2 284 44.0
C09p73160 Brassica napus HOM05D001312 ORTHO05D008018 4.3e-55 218.8 284 44.4
Nitab4.5_0000132g0320 Nicotiana tabacum HOM05D001312 ORTHO05D008018 5.7e-55 218.4 314 42.7
vmacro07336 Vaccinium macrocarpon HOM05D001312 ORTHO05D008018 7.4e-55 218.0 286 44.8
Sed0012062 Sechium edule HOM05D001312 ORTHO05D008018 1.3e-54 217.2 285 44.6
SalBow3G2703 Salvia bowleyana HOM05D001312 ORTHO05D008018 2.8e-54 216.1 316 41.1
Lsat_1_v5_gn_1_50640 Lactuca sativa HOM05D001312 ORTHO05D008018 4.8e-54 215.3 285 44.9
Hma1.2p1_0651F.1_g195720 Hydrangea macrophylla HOM05D001312 ORTHO05D008018 6.3e-54 214.9 268 47.4
SGA_v2.0_scaffold40G15429 Striga asiatica HOM05D001312 ORTHO05D008018 6.3e-54 214.9 276 46.0
ECA248G1880 Erigeron canadensis HOM05D001312 ORTHO05D008018 8.2e-54 214.5 283 45.6
Thhalv10013569m.g Eutrema salsugineum HOM05D001312 ORTHO05D008018 8.2e-54 214.5 284 43.3
CsaV3_6G040350 Cucumis sativus L. HOM05D001312 ORTHO05D008018 1.1e-53 214.2 285 42.8
Sp6g38960 Schrenkiella parvula HOM05D001312 ORTHO05D008018 1.1e-53 214.2 285 43.5
THA.LOC104816378 Tarenaya hassleriana HOM05D001312 ORTHO05D008018 1.1e-53 214.2 286 44.4
ClCG04G009690 Citrullus lanatus HOM05D001312 ORTHO05D008018 1.8e-53 213.4 289 43.6
FAN02G1263 Fragaria x ananassa HOM05D001312 ORTHO05D008018 4.1e-53 212.2 284 44.7
AT5G03770 Arabidopsis thaliana HOM05D001312 ORTHO05D008018 5.3e-53 211.8 284 43.0
Oeu039841.2 Olea europaea HOM05D001312 ORTHO05D008018 5.3e-53 211.8 319 41.1
PSO339G3022 Papaver somniferum HOM05D001312 ORTHO05D008018 2.0e-52 209.9 289 42.9
SEGI_32755 Sequoiadendron giganteum HOM05D001312 ORTHO05D008018 2.0e-52 209.9 286 42.7
ATR0820G168 Amborella trichopoda HOM05D001312 ORTHO05D008018 2.6e-52 209.5 283 45.2
Carub.0006s0268 Capsella rubella HOM05D001312 ORTHO05D008018 3.4e-52 209.1 284 42.6
BcaC06g32083 Brassica carinata HOM05D001312 ORTHO05D008018 4.5e-52 208.8 284 42.3
Solyc10g083710.2 Solanum lycopersicum HOM05D001312 ORTHO05D008018 7.7e-52 208.0 265 45.7
QL07p040881 Quercus lobata HOM05D001312 ORTHO05D008018 1.3e-51 207.2 359 38.2
HanXRQChr01g0028401 Helianthus annuus HOM05D001312 ORTHO05D008018 6.5e-51 204.9 286 44.1
Rhsim03G0083100 Rhododendron simsii HOM05D001312 ORTHO05D008018 8.5e-51 204.5 260 46.5
PSO063G2793 Papaver somniferum HOM05D001312 ORTHO05D008018 1.1e-50 204.1 316 39.2
AL6G13310 Arabidopsis lyrata HOM05D001312 ORTHO05D008018 1.2e-49 200.7 306 39.2
Lj3A1005G38 Lonicera japonica HOM05D001312 ORTHO05D008018 2.1e-49 199.9 336 38.7
Ca_11617_v3 Cicer arietinum L. HOM05D001312 ORTHO05D008018 3.0e-48 196.1 225 50.2
unitig_744.g24689 Utricularia gibba HOM05D001312 ORTHO05D008018 3.9e-48 195.7 279 43.7
Sc02g0001220 Simmondsia chinensis HOM05D001312 ORTHO05D008018 1.5e-47 193.7 232 47.8
Sabra16G0101200 Salix brachista HOM05D001312 ORTHO05D008018 5.7e-47 191.8 397 34.3
GSVIVG01033751001 Vitis vinifera HOM05D001312 ORTHO05D008018 9.7e-47 191.0 232 47.0
DCAR_015029 Daucus carota HOM05D001312 ORTHO05D008018 1.7e-46 190.3 271 42.4
MELO3C024510.2 Cucumis melo HOM05D001312 ORTHO05D008018 7.0e-45 184.9 232 44.8
Manes.08G018900 Manihot esculenta HOM05D001312 ORTHO05D008018 5.0e-43 178.7 232 45.7
Gohir.A04G066728 Gossypium hirsutum HOM05D001312 ORTHO05D008018 9.4e-42 174.5 232 42.7
Pp3c21_8090 Physcomitrium patens HOM05D001312 ORTHO05D008018 6.3e-38 161.8 288 35.8
Dinv35859 Davidia involucrata HOM05D001312 ORTHO05D008018 1.8e-37 160.2 209 45.0
Haze_19515 Corylus avellana HOM05D001312 ORTHO05D008018 1.0e-35 154.5 237 43.0
HPP92_006796 Vanilla planifolia HOM05D001312 ORTHO05D008018 6.5e-35 151.8 209 42.6
Ciclev10013092m.g Citrus clementina HOM05D001312 ORTHO05D008018 6.1e-33 145.2 118 61.9
AagrBONN_evm.TU.Sc2ySwM_344.3661 Anthoceros agrestis HOM05D001312 ORTHO05D008018 8.0e-33 144.8 283 33.2
Lalb_Chr21g0315421 Lupinus albus HOM05D001312 ORTHO05D008018 1.4e-32 144.1 134 56.0
SMO364G0357 Selaginella moellendorffii HOM05D001312 ORTHO05D008018 5.2e-32 142.1 283 35.7
Sopen10g033180 Solanum pennellii HOM05D001312 ORTHO05D008018 2.0e-31 140.2 133 54.9
Peaxi162Scf00110g01214 Petunia axillaris HOM05D001312 ORTHO05D008018 1.1e-29 134.4 298 34.6
MBI01_g48091_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 4.1e-29 132.5 119 59.7
MBI01_g23067_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 5.4e-29 132.1 103 63.1
Atru.chr8.1664 Acer truncatum HOM05D001312 ORTHO05D008018 1.0e-27 127.9 105 61.9
Mapoly0002s0209 Marchantia polymorpha HOM05D001312 ORTHO05D008018 1.0e-27 127.9 285 30.9
Ciclev10032390m.g Citrus clementina HOM05D001312 ORTHO05D008018 2.5e-26 123.2 112 57.1
CARHR209530 Cardamine hirsuta HOM05D001312 ORTHO05D008018 3.6e-25 119.4 103 53.4
Lalb_Chr21g0315431 Lupinus albus HOM05D001312 ORTHO05D008018 6.1e-25 118.6 103 59.2
CBR_g874 Chara braunii HOM05D001312 ORTHO05D008018 2.2e-22 110.2 217 35.9
arahy.Tifrunner.gnm1.ann1.IWGZ26 Arachis hypogaea HOM05D001312 ORTHO05D008018 9.1e-21 104.8 105 51.4
Glyma.13G150200 Glycine max HOM05D001312 ORTHO05D008018 2.3e-16 90.1 64 73.4
CARHR208850 Cardamine hirsuta HOM05D001312 ORTHO05D008018 5.2e-16 89.0 81 54.3
A03p01370 Brassica napus HOM05D001312 ORTHO05D008018 3.6e-09 66.2 66 53.0
CARHR208860 Cardamine hirsuta HOM05D001312 ORTHO05D008018 6.2e-09 65.5 58 55.2


User provided reference genes

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