Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037790 Chenopodium quinoa HOM05D002737 ORTHO05D005828 2.4e-92 342.4 209 100.0
AUR62018224 Chenopodium quinoa HOM05D002737 ORTHO05D005828 8.0e-80 300.8 212 90.1
EL10Ac7g17115 Beta vulgaris HOM05D002737 ORTHO05D005828 8.9e-55 217.6 209 65.6
Ah.10g032410 Amaranthus hybridus HOM05D002737 ORTHO05D005828 9.5e-49 197.6 257 51.0
Hund18792 Selenicereus undatus HOM05D002737 ORTHO05D005828 1.7e-42 176.8 234 59.0
CAN.G745.41 Capsicum annuum HOM05D002737 ORTHO05D005828 5.6e-41 171.8 215 52.6
Sopen11g027560 Solanum pennellii HOM05D002737 ORTHO05D005828 2.8e-40 169.5 209 53.6
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 4.8e-40 168.7 205 52.7
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 6.2e-40 168.3 208 51.0
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 8.1e-40 167.9 206 51.5
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 8.1e-40 167.9 206 51.5
Solyc11g068870.2 Solanum lycopersicum HOM05D002737 ORTHO05D005828 1.4e-39 167.2 210 52.4
PGSC0003DMG400019621 Solanum tuberosum HOM05D002737 ORTHO05D005828 1.4e-39 167.2 212 53.3
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 2.4e-39 166.4 207 51.7
Peaxi162Scf01010g00216 Petunia axillaris HOM05D002737 ORTHO05D005828 3.1e-39 166.0 210 52.9
Peaxi162Scf00010g03312 Petunia axillaris HOM05D002737 ORTHO05D005828 9.0e-39 164.5 206 53.4
unitig_88.g27805 Utricularia gibba HOM05D002737 ORTHO05D002121 1.5e-38 163.7 208 49.5
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 5.8e-38 161.8 210 49.0
Nitab4.5_0001135g0150 Nicotiana tabacum HOM05D002737 ORTHO05D005828 5.8e-38 161.8 207 49.8
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 1.3e-37 160.6 210 48.1
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 1.7e-37 160.2 213 51.6
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 1.7e-37 160.2 212 51.4
Nitab4.5_0000893g0040 Nicotiana tabacum HOM05D002737 ORTHO05D005828 8.4e-37 157.9 207 50.2
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 1.9e-36 156.8 222 50.5
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 2.4e-36 156.4 218 55.5
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 7.1e-36 154.8 216 47.7
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 7.1e-36 154.8 210 46.7
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 9.3e-36 154.5 219 47.9
SGA_v2.0_scaffold114G31961 Striga asiatica HOM05D002737 ORTHO05D005828 1.2e-35 154.1 223 48.4
ECA248G3131 Erigeron canadensis HOM05D002737 ORTHO05D005828 1.6e-35 153.7 208 49.0
CDE06G1256 Ceratophyllum demersum HOM05D002737 ORTHO05D005828 2.1e-35 153.3 207 49.3
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 2.1e-35 153.3 210 48.6
PGR119G1771 Punica granatum HOM05D002737 ORTHO05D005828 2.1e-35 153.3 223 47.1
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 2.1e-35 153.3 207 49.8
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 3.5e-35 152.5 210 48.6
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 3.5e-35 152.5 222 48.6
Thecc.09G275600 Theobroma cacao HOM05D002737 ORTHO05D005828 4.6e-35 152.1 210 55.7
Peaxi162Scf00010g03410 Petunia axillaris HOM05D002737 ORTHO05D005828 6.0e-35 151.8 211 49.8
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 7.8e-35 151.4 229 45.9
Actinidia24241 Actinidia chinensis HOM05D002737 ORTHO05D005828 1.0e-34 151.0 191 52.4
vmacro06935 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 1.0e-34 151.0 207 48.8
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 2.3e-34 149.8 211 48.3
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 2.3e-34 149.8 211 48.8
Migut.D02412 Erythranthe guttata HOM05D002737 ORTHO05D005828 3.0e-34 149.4 216 48.1
MSTRG.21020 Avicennia marina HOM05D002737 ORTHO05D005828 3.9e-34 149.1 211 46.0
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 3.9e-34 149.1 215 48.8
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 8.7e-34 147.9 209 45.0
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 8.7e-34 147.9 118 71.2
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 1.1e-33 147.5 213 47.9
Rhsim13G0195300 Rhododendron simsii HOM05D002737 ORTHO05D005828 1.1e-33 147.5 209 46.4
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.9e-33 146.7 222 45.5
SGA_v2.0_scaffold7G03980 Striga asiatica HOM05D002737 ORTHO05D005828 2.5e-33 146.4 220 46.8
Cc01_g08470 Coffea canephora HOM05D002737 ORTHO05D005828 3.3e-33 146.0 212 48.1
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 3.3e-33 146.0 229 45.0
CsaV3_2G009130 Cucumis sativus L. HOM05D002737 ORTHO05D005828 3.3e-33 146.0 219 46.6
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 5.6e-33 145.2 217 48.8
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 5.6e-33 145.2 210 46.2
PSO063G0569 Papaver somniferum HOM05D002737 ORTHO05D005828 5.6e-33 145.2 219 44.7
GSVIVG01036054001 Vitis vinifera HOM05D002737 ORTHO05D005828 9.6e-33 144.4 108 72.2
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 1.3e-32 144.1 207 46.4
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 1.3e-32 144.1 215 47.9
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.3e-32 144.1 219 46.6
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 2.1e-32 143.3 216 45.4
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 2.8e-32 142.9 224 46.4
ATR0807G231 Amborella trichopoda HOM05D002737 ORTHO05D005828 4.8e-32 142.1 232 46.6
Sed0023461 Sechium edule HOM05D002737 ORTHO05D005828 4.8e-32 142.1 225 43.1
MBI01_g04520_MAGBIO Magnolia biondii HOM05D002737 ORTHO05D005828 6.2e-32 141.7 205 46.8
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 8.1e-32 141.4 235 48.1
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 8.1e-32 141.4 223 43.5
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 1.1e-31 141.0 221 42.5
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 1.4e-31 140.6 221 44.3
QL07p000693 Quercus lobata HOM05D002737 ORTHO05D009499 1.4e-31 140.6 173 52.0
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 1.8e-31 140.2 121 63.6
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 2.4e-31 139.8 207 45.9
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 2.4e-31 139.8 230 44.3
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 2.4e-31 139.8 213 44.6
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 3.1e-31 139.4 222 42.8
HanXRQChr03g0065531 Helianthus annuus HOM05D002737 ORTHO05D005828 4.0e-31 139.0 110 68.2
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 5.3e-31 138.7 236 42.4
Peaxi162Scf01324g00241 Petunia axillaris HOM05D002737 ORTHO05D005828 6.9e-31 138.3 211 48.8
CiPaw.13G131400 Carya illinoinensis HOM05D002737 ORTHO05D005828 1.5e-30 137.1 222 49.5
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 1.5e-30 137.1 230 43.9
HPP92_021234 Vanilla planifolia HOM05D002737 ORTHO05D005828 4.5e-30 135.6 219 43.8
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 5.8e-30 135.2 226 42.0
Aqoxy4G02622 Aquilegia oxysepala HOM05D002737 ORTHO05D005828 1.3e-29 134.0 219 43.8
Sabra15G0046000 Salix brachista HOM05D002737 ORTHO05D005828 1.7e-29 133.7 212 49.1
Sabra15G0048200 Salix brachista HOM05D002737 ORTHO05D005828 1.7e-29 133.7 212 49.1
Sabra15G0059900 Salix brachista HOM05D002737 ORTHO05D005828 1.7e-29 133.7 212 49.1
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 2.2e-29 133.3 219 45.7
Sabra09G0126900 Salix brachista HOM05D002737 ORTHO05D005828 2.9e-29 132.9 207 48.3
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 2.9e-29 132.9 213 45.5
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 3.8e-29 132.5 208 43.8
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 6.4e-29 131.7 94 73.4
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 6.4e-29 131.7 94 73.4
CDE08G0429 Ceratophyllum demersum HOM05D002737 ORTHO05D003752 6.4e-29 131.7 120 65.0
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 2.4e-28 129.8 207 42.5
Migut.D02413 Erythranthe guttata HOM05D002737 ORTHO05D005828 2.4e-28 129.8 214 43.5
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 4.2e-28 129.0 221 40.7
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 9.3e-28 127.9 218 43.1
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 1.2e-27 127.5 214 43.5
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 2.1e-27 126.7 99 69.7
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 6.0e-27 125.2 228 41.2
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 6.0e-27 125.2 220 43.2
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 1.8e-26 123.6 217 44.7
Atru.chr3.3139 Acer truncatum HOM05D002737 ORTHO05D005828 2.3e-26 123.2 117 53.0
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 3.0e-26 122.9 217 49.8
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 3.0e-26 122.9 217 49.8
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 3.0e-26 122.9 255 39.6
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 3.9e-26 122.5 211 43.1
Zm00001eb422940 Zea mays HOM05D002737 ORTHO05D005828 3.9e-26 122.5 206 41.3
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 1.5e-25 120.6 219 43.8
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 1.9e-25 120.2 220 41.8
arahy.Tifrunner.gnm1.ann1.4SNC56 Arachis hypogaea HOM05D002737 ORTHO05D005828 3.3e-25 119.4 211 42.7
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 9.6e-25 117.9 217 42.4
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 9.6e-25 117.9 217 42.4
Pp3c10_11700 Physcomitrium patens HOM05D002737 ORTHO05D005828 9.6e-25 117.9 132 55.3
QL07p000775 Quercus lobata HOM05D002737 ORTHO05D005828 2.8e-24 116.3 191 46.1
AT1G55928 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 4.8e-24 115.5 151 50.3
AL1G53070 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.8e-23 113.6 114 55.3
AagrBONN_evm.TU.Sc2ySwM_368.3225 Anthoceros agrestis HOM05D002737 ORTHO05D005828 2.6e-22 109.8 89 68.5
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 2.6e-22 109.8 207 40.1
TPR.G14160 Trifolium pratense HOM05D002737 ORTHO05D005828 3.4e-22 109.4 216 39.4
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 7.6e-22 108.2 217 40.1
Mapoly0024s0122 Marchantia polymorpha HOM05D002737 ORTHO05D005828 8.4e-21 104.8 233 37.3
Os04g0440000 Oryza sativa ssp. japonica HOM05D002737 ORTHO05D005828 8.4e-21 104.8 227 40.1
CBR_g45752 Chara braunii HOM05D002737 ORTHO05D005828 3.2e-20 102.8 102 57.8
MCO06G117 Micromonas commoda HOM05D002737 ORTHO05D005828 4.6e-19 99.0 121 49.6
Sabra15G0053400 Salix brachista HOM05D002737 ORTHO05D005828 7.9e-19 98.2 206 44.2
SEGI_17121 Sequoiadendron giganteum HOM05D002737 ORTHO05D005828 1.0e-18 97.8 73 68.5
Sabra15G0053700 Salix brachista HOM05D002737 ORTHO05D005828 2.3e-18 96.7 132 48.5
CARHR119800 Cardamine hirsuta HOM05D002737 ORTHO05D005828 3.3e-17 92.8 67 70.1
SHI06201 Sapria himalayana HOM05D002737 ORTHO05D005828 4.3e-17 92.4 73 68.5
CBR_g6328 Chara braunii HOM05D002737 ORTHO05D005828 2.8e-16 89.7 146 44.5
AagrBONN_evm.TU.Sc2ySwM_368.3239 Anthoceros agrestis HOM05D002737 ORTHO05D005828 1.8e-15 87.0 76 64.5
Cre17.g734000 Chlamydomonas reinhardtii HOM05D002737 ORTHO05D005828 4.5e-14 82.4 91 48.4
Oeu025863.1 Olea europaea HOM05D002737 ORTHO05D005828 5.5e-12 75.5 49 75.5
AagrBONN_evm.TU.Sc2ySwM_368.3190 Anthoceros agrestis HOM05D000001 ORTHO05D072262 1.5e-09 67.4 63 60.3
Gohir.D05G081600 Gossypium hirsutum HOM05D002737 ORTHO05D005828 2.2e-08 63.5 212 30.7
Potri.004G201300 Populus trichocarpa HOM05D002737 ORTHO05D005828 1.4e-07 60.8 205 31.7
Migut.D02400 Erythranthe guttata HOM05D002737 ORTHO05D005828 6.9e-07 58.5 209 31.1
arahy.Tifrunner.gnm1.ann1.0K86JE Arachis hypogaea HOM05D002737 ORTHO05D005828 2.0e-06 57.0 194 33.0


User provided reference genes

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