Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 6.5e-196 687.2 344 100.0
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 2.1e-141 506.1 320 76.2
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 2.3e-140 502.7 320 75.6
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 7.3e-139 497.7 332 73.2
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 3.6e-138 495.4 320 73.1
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 1.1e-137 493.8 320 73.8
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 3.1e-137 492.3 320 73.8
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 4.0e-137 491.9 320 74.4
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 6.9e-137 491.1 350 68.6
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 9.0e-137 490.7 320 73.8
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 9.0e-137 490.7 319 74.9
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 9.0e-137 490.7 320 73.4
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 1.5e-136 490.0 319 74.0
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 1.5e-136 490.0 321 73.8
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 2.0e-136 489.6 320 74.1
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 2.6e-136 489.2 320 73.4
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 3.4e-136 488.8 320 72.8
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 3.4e-136 488.8 320 72.8
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 4.5e-136 488.4 320 73.1
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 5.8e-136 488.0 319 73.4
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 2.2e-135 486.1 320 73.1
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 2.2e-135 486.1 319 72.7
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 2.2e-135 486.1 320 73.1
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 2.9e-135 485.7 319 73.0
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 3.8e-135 485.3 320 73.8
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 4.9e-135 485.0 320 72.8
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 4.9e-135 485.0 318 73.9
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 1.4e-134 483.4 319 73.0
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 1.9e-134 483.0 322 72.0
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 2.4e-134 482.6 319 73.0
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 2.4e-134 482.6 320 71.6
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 2.4e-134 482.6 321 73.2
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 3.2e-134 482.3 319 72.4
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 4.2e-134 481.9 320 72.8
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 5.4e-134 481.5 319 72.1
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 1.2e-133 480.3 323 72.8
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 1.2e-133 480.3 323 72.8
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 1.2e-133 480.3 320 71.6
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 2.7e-133 479.2 321 72.6
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 2.7e-133 479.2 319 73.0
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 6.0e-133 478.0 320 72.8
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 7.9e-133 477.6 319 72.4
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 5.1e-132 474.9 322 72.4
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 6.7e-132 474.6 321 71.3
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 6.7e-132 474.6 320 70.6
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 7.4e-131 471.1 320 70.9
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 9.6e-131 470.7 327 71.3
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 1.6e-130 469.9 318 71.7
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 2.1e-130 469.5 320 70.6
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 2.8e-130 469.2 319 71.2
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 4.8e-130 468.4 318 71.1
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 4.8e-130 468.4 320 71.2
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 1.1e-129 467.2 320 72.5
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 1.4e-129 466.8 326 70.2
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 4.0e-129 465.3 320 69.7
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 5.3e-129 464.9 320 70.0
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 2.0e-128 463.0 323 70.0
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 3.4e-128 462.2 319 70.8
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 7.6e-128 461.1 301 74.8
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 1.0e-127 460.7 331 68.6
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 1.7e-127 459.9 320 69.4
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 4.2e-126 455.3 367 62.4
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 1.6e-125 453.4 319 69.0
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 5.1e-124 448.4 333 67.3
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 1.5e-123 446.8 299 71.2
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 3.3e-123 445.7 320 67.5
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 5.7e-123 444.9 300 71.3
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 1.1e-121 440.7 320 66.2
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 1.8e-121 439.9 300 72.0
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 6.3e-114 414.8 320 65.0
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 5.0e-111 405.2 280 70.4
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 8.5e-111 404.4 257 75.9
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 8.5e-111 404.4 258 76.0
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 2.5e-110 402.9 282 70.9
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 5.5e-110 401.7 530 43.8
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 1.0e-108 397.5 340 62.6
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 1.8e-108 396.7 262 72.9
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 2.3e-108 396.4 258 75.6
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 6.7e-108 394.8 340 60.6
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 9.7e-107 391.0 348 59.2
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 3.7e-106 389.0 322 58.1
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 1.8e-105 386.7 324 59.0
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 3.6e-101 372.5 318 60.1
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 3.6e-101 372.5 331 58.0
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 7.9e-101 371.3 319 54.5
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 1.3e-98 364.0 326 54.3
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 1.7e-98 363.6 259 66.4
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 7.0e-97 358.2 247 71.7
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 1.2e-88 330.9 299 57.9
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 2.7e-80 303.1 192 74.0
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 8.0e-77 291.6 349 45.3
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 7.7e-72 275.0 192 71.9
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 2.3e-68 263.5 228 59.2
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 2.6e-67 260.0 338 43.5
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 9.5e-62 241.5 198 58.6
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 1.2e-56 224.6 365 38.1
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 1.1e-49 201.4 120 81.7
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 2.4e-49 200.3 121 80.2
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 4.0e-44 183.0 121 69.4
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 5.2e-44 182.6 125 70.4
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.0e-39 168.3 321 35.5
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 5.6e-38 162.5 101 77.2
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 3.0e-31 140.2 78 85.9
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 3.0e-31 140.2 78 85.9
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 1.5e-30 137.9 75 85.3
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 2.5e-30 137.1 73 86.3
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 6.4e-26 122.5 119 60.5
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 2.8e-13 80.5 121 34.7
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 4.9e-10 69.7 45 66.7


User provided reference genes

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