Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 6.0e-141 504.2 265 100.0
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 1.1e-121 440.3 265 86.0
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.2e-109 400.2 267 80.5
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 2.9e-95 352.4 390 55.4
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 1.2e-93 347.1 265 70.2
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 8.9e-92 340.9 266 68.8
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 1.5e-91 340.1 266 68.4
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 3.4e-91 339.0 266 67.7
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.3e-90 337.0 266 67.3
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 1.4e-89 333.6 264 69.3
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 5.4e-89 331.6 267 68.5
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 9.2e-89 330.9 266 67.3
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 1.2e-88 330.5 266 66.9
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 2.8e-85 319.3 300 62.3
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 1.8e-84 316.6 269 67.3
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 2.3e-84 316.2 246 69.9
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 5.2e-84 315.1 269 66.5
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.2e-83 313.9 279 63.1
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 5.8e-83 311.6 275 65.5
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 7.5e-83 311.2 274 66.4
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 7.5e-83 311.2 270 65.9
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 1.3e-82 310.5 292 60.6
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 2.9e-82 309.3 264 64.4
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.9e-82 309.3 281 62.3
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 2.9e-82 309.3 278 63.3
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.7e-82 308.9 268 64.9
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 4.9e-82 308.5 272 65.8
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 4.9e-82 308.5 267 65.5
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 8.3e-82 307.8 280 64.3
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 3.2e-81 305.8 268 64.2
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 3.2e-81 305.8 300 57.7
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 5.4e-81 305.1 249 68.7
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 7.0e-81 304.7 250 68.0
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.6e-80 303.5 287 61.0
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.0e-80 303.1 278 62.2
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 2.7e-80 302.8 271 64.9
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 2.7e-80 302.8 250 66.4
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 6.0e-80 301.6 278 60.1
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 6.0e-80 301.6 244 68.4
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.0e-79 300.8 283 64.0
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 1.3e-79 300.4 249 66.7
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.3e-79 300.4 265 63.8
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 3.9e-79 298.9 278 60.4
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 5.0e-79 298.5 249 66.7
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 8.6e-79 297.7 242 66.5
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 1.1e-78 297.4 272 62.9
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.1e-78 297.4 286 58.7
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 1.5e-78 297.0 274 64.2
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.9e-78 296.6 242 66.1
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 2.5e-78 296.2 303 57.1
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.3e-78 295.8 286 58.4
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 4.3e-78 295.4 272 62.5
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 4.3e-78 295.4 272 62.5
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 7.3e-78 294.7 246 65.4
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 9.5e-78 294.3 273 60.4
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 1.2e-77 293.9 268 62.7
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.6e-77 293.5 272 62.1
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 1.6e-77 293.5 279 60.6
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 2.8e-77 292.7 280 61.4
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 4.7e-77 292.0 277 59.6
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.7e-77 292.0 277 59.6
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 6.2e-77 291.6 301 56.8
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 1.4e-76 290.4 276 60.1
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 1.4e-76 290.4 278 59.7
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.4e-76 290.4 297 57.9
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.8e-76 290.0 297 57.9
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 1.8e-76 290.0 307 56.7
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 1.8e-76 290.0 302 57.0
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 2.3e-76 289.7 278 61.2
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 4.0e-76 288.9 210 71.9
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.0e-76 288.9 277 59.6
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 4.0e-76 288.9 277 59.6
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 2.6e-75 286.2 276 62.3
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 3.4e-75 285.8 286 59.1
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 3.4e-75 285.8 298 54.7
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.3e-74 283.9 272 58.1
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.3e-74 283.9 283 60.4
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 4.9e-74 282.0 285 58.6
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 8.3e-74 281.2 268 58.2
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.1e-73 280.8 285 56.5
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.4e-73 280.4 282 57.1
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.9e-73 280.0 302 54.6
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 2.4e-73 279.6 252 63.9
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 5.4e-73 278.5 285 56.1
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 6.6e-71 271.6 271 57.6
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 7.3e-70 268.1 282 55.3
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 9.5e-70 267.7 274 58.0
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 2.8e-69 266.2 268 58.6
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 8.1e-69 264.6 208 67.3
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 8.9e-68 261.2 260 58.1
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 2.6e-67 259.6 279 54.8
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 5.8e-67 258.5 274 55.1
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 7.5e-67 258.1 321 49.2
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 2.4e-65 253.1 271 54.2
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 7.1e-65 251.5 304 53.0
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.6e-64 250.4 270 56.3
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.7e-63 246.9 180 70.6
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 1.6e-61 240.4 272 54.8
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 8.1e-61 238.0 133 95.5
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 2.4e-60 236.5 273 54.6
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.2e-59 234.2 173 70.5
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.3e-55 220.7 173 67.6
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 2.5e-54 216.5 279 52.0
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 6.2e-45 185.3 211 51.7
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.5e-43 180.6 133 71.4
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.5e-43 180.6 157 63.1
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 6.7e-39 165.2 141 66.0
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 3.3e-38 162.9 134 66.4
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.2e-32 144.4 126 62.7
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.1e-30 137.9 161 53.4
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.6e-29 134.0 182 50.0
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 3.8e-26 122.9 139 54.7
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.6e-24 117.5 93 68.8
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 1.3e-21 107.8 77 70.1
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 2.2e-18 97.1 192 38.5
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.4e-17 94.4 112 55.4
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 9.4e-17 91.7 107 57.0
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 2.3e-07 60.5 97 45.4
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 1.1e-06 58.2 71 53.5
Cre10.g423350 Chlamydomonas reinhardtii HOM05D006579 ORTHO05D007783 9.7e-06 55.1 189 29.6
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 9.7e-06 55.1 42 61.9


User provided reference genes

Program Settings