Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037470 Chenopodium quinoa HOM05D003423 ORTHO05D003910 1.7e-152 542.7 287 100.0
AUR62024542 Chenopodium quinoa HOM05D003423 ORTHO05D003910 2.9e-48 196.4 107 90.7
AUR62036428 Chenopodium quinoa HOM05D003423 ORTHO05D003910 2.6e-44 183.3 128 74.2
AUR62036422 Chenopodium quinoa HOM05D003423 ORTHO05D003910 7.4e-44 181.8 128 73.4
AUR62017070 Chenopodium quinoa HOM05D003423 ORTHO05D003910 8.2e-43 178.3 122 75.4
AUR62028647 Chenopodium quinoa HOM05D003423 ORTHO05D003910 3.5e-41 172.9 99 86.9
AUR62004712 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.0e-36 157.1 125 76.8
Ah.06g181290 Amaranthus hybridus HOM05D003423 ORTHO05D003910 5.7e-36 155.6 134 64.2
EL10Ac4g07604 Beta vulgaris HOM05D003423 ORTHO05D003910 2.4e-34 150.2 125 64.0
Hund01908 Selenicereus undatus HOM05D003423 ORTHO05D003910 5.3e-34 149.1 123 65.0
CiPaw.11G202400 Carya illinoinensis HOM05D003423 ORTHO05D003910 4.2e-31 139.4 131 57.3
Manes.03G139900 Manihot esculenta HOM05D003423 ORTHO05D003910 2.1e-30 137.1 131 56.5
TWI39G0701 Tripterygium wilfordii HOM05D003423 ORTHO05D003910 2.7e-30 136.7 130 53.8
Haze_09806 Corylus avellana HOM05D003423 ORTHO05D003910 8.0e-30 135.2 125 57.6
Hma1.2p1_0036F.1_g022545 Hydrangea macrophylla HOM05D003423 ORTHO05D003910 8.0e-30 135.2 129 55.8
Hma1.2p1_0036F.1_g022550 Hydrangea macrophylla HOM05D003423 ORTHO05D003910 8.0e-30 135.2 129 55.8
QL08p004807 Quercus lobata HOM05D003423 ORTHO05D003910 1.8e-29 134.0 130 55.4
Gohir.A04G002900 Gossypium hirsutum HOM05D003423 ORTHO05D003910 8.8e-29 131.7 114 60.5
Gohir.D13G137300 Gossypium hirsutum HOM05D003423 ORTHO05D003910 8.8e-29 131.7 114 60.5
PSO063G5220 Papaver somniferum HOM05D003423 ORTHO05D003910 8.8e-29 131.7 121 57.0
TAR624G0752 Trochodendron aralioides HOM05D003423 ORTHO05D003910 8.8e-29 131.7 104 64.4
Atru.chr2.3667 Acer truncatum HOM05D003423 ORTHO05D003910 1.2e-28 131.3 129 55.0
Manes.15G061600 Manihot esculenta HOM05D003423 ORTHO05D003910 1.2e-28 131.3 131 54.2
Dinv10321 Davidia involucrata HOM05D003423 ORTHO05D003910 1.5e-28 131.0 104 65.4
Duzib213G0099 Durio zibethinus HOM05D003423 ORTHO05D003910 1.5e-28 131.0 104 64.4
Gorai.010G207500 Gossypium raimondii HOM05D003423 ORTHO05D003910 1.5e-28 131.0 114 61.4
Gorai.013G153900 Gossypium raimondii HOM05D003423 ORTHO05D003910 2.6e-28 130.2 114 59.6
TWI38G0990 Tripterygium wilfordii HOM05D003423 ORTHO05D003910 2.6e-28 130.2 131 53.4
Nn1g07481 Nelumbo nucifera HOM05D003423 ORTHO05D003910 3.4e-28 129.8 122 57.4
Thecc.07G016500 Theobroma cacao HOM05D003423 ORTHO05D003910 3.4e-28 129.8 104 62.5
ClCG09G021170 Citrullus lanatus HOM05D003423 ORTHO05D003910 4.4e-28 129.4 105 63.8
PSO782G1032 Papaver somniferum HOM05D003423 ORTHO05D003910 5.7e-28 129.0 121 57.0
Prupe.4G239900 Prunus persica HOM05D003423 ORTHO05D003910 7.5e-28 128.6 114 59.6
GSVIVG01014644001 Vitis vinifera HOM05D003423 ORTHO05D003910 7.5e-28 128.6 123 56.1
CANSAT11G1165 Cannabis sativa HOM05D003423 ORTHO05D003910 9.8e-28 128.3 108 60.2
FAN25G2240 Fragaria x ananassa HOM05D003423 ORTHO05D003910 9.8e-28 128.3 114 57.0
MBI16_g46430_MAGBIO Magnolia biondii HOM05D003423 ORTHO05D003910 9.8e-28 128.3 111 56.8
Sp1g41520 Schrenkiella parvula HOM05D003423 ORTHO05D003910 9.8e-28 128.3 124 56.5
CiPaw.12G136700 Carya illinoinensis HOM05D003423 ORTHO05D003910 1.3e-27 127.9 104 62.5
MELO3C024918.2 Cucumis melo HOM05D003423 ORTHO05D003910 1.7e-27 127.5 114 59.6
Sed0002105 Sechium edule HOM05D003423 ORTHO05D003910 1.7e-27 127.5 105 62.9
Rhsim04G0013800 Rhododendron simsii HOM05D003423 ORTHO05D003910 2.2e-27 127.1 104 62.5
ATR0580G345 Amborella trichopoda HOM05D003423 ORTHO05D003910 2.8e-27 126.7 117 56.4
Lj1A888G39 Lonicera japonica HOM05D003423 ORTHO05D003910 2.8e-27 126.7 104 63.5
Psat7g121520 Pisum sativum HOM05D003423 ORTHO05D003910 2.8e-27 126.7 104 61.5
Aa31LG10G260 Aethionema arabicum HOM05D003423 ORTHO05D003910 3.7e-27 126.3 123 55.3
FvH4_3g29470 Fragaria vesca HOM05D003423 ORTHO05D003910 3.7e-27 126.3 114 56.1
FAN11G0659 Fragaria x ananassa HOM05D003423 ORTHO05D003910 3.7e-27 126.3 114 56.1
Lalb_Chr15g0081991 Lupinus albus HOM05D003423 ORTHO05D003910 3.7e-27 126.3 105 63.8
RcHm_v2.0_Chr5g0054021 Rosa chinensis HOM05D003423 ORTHO05D003910 3.7e-27 126.3 114 56.1
PGSC0003DMG400009184 Solanum tuberosum HOM05D003423 ORTHO05D003910 3.7e-27 126.3 91 65.9
Eucgr.F03997 Eucalyptus grandis HOM05D003423 ORTHO05D003910 4.8e-27 125.9 109 58.7
Glyma.18G078800 Glycine max HOM05D003423 ORTHO05D003910 4.8e-27 125.9 104 62.5
Nitab4.5_0001691g0030 Nicotiana tabacum HOM05D003423 ORTHO05D003910 4.8e-27 125.9 91 64.8
vmacro18704 Vaccinium macrocarpon HOM05D003423 ORTHO05D003910 4.8e-27 125.9 97 61.9
Aqoxy6G02866 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 8.3e-27 125.2 104 59.6
Carub.0001s4451 Capsella rubella HOM05D003423 ORTHO05D003910 8.3e-27 125.2 122 56.6
Atru.chr1.2766 Acer truncatum HOM05D003423 ORTHO05D003910 1.1e-26 124.8 91 63.7
CsaV3_7G018340 Cucumis sativus L. HOM05D003423 ORTHO05D003910 1.1e-26 124.8 114 57.9
arahy.Tifrunner.gnm1.ann1.08VBYE Arachis hypogaea HOM05D003423 ORTHO05D003910 1.4e-26 124.4 104 61.5
FAN21G0447 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.4e-26 124.4 114 55.3
Peaxi162Scf00038g02438 Petunia axillaris HOM05D003423 ORTHO05D003910 1.4e-26 124.4 91 65.9
Phvul.006G055600 Phaseolus vulgaris HOM05D003423 ORTHO05D003910 1.4e-26 124.4 132 50.8
Ca_00986_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 1.8e-26 124.0 97 62.9
Ca_01000_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 1.8e-26 124.0 97 62.9
FvH4_6g37480 Fragaria vesca HOM05D003423 ORTHO05D003910 1.8e-26 124.0 91 64.8
FAN14G2430 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.8e-26 124.0 91 64.8
Lj6g0015704 Lotus japonicus HOM05D003423 ORTHO05D003910 1.8e-26 124.0 113 58.4
Dinv37806 Davidia involucrata HOM05D003423 ORTHO05D003910 2.4e-26 123.6 105 59.0
Prupe.3G168300 Prunus persica HOM05D003423 ORTHO05D003910 2.4e-26 123.6 91 64.8
Aqoxy2G03521 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 3.1e-26 123.2 110 58.2
FAN05G4329 Fragaria x ananassa HOM05D003423 ORTHO05D003910 3.1e-26 123.2 91 64.8
FAN09G1601 Fragaria x ananassa HOM05D003423 ORTHO05D003910 3.1e-26 123.2 91 64.8
MD11G1201700 Malus domestica HOM05D003423 ORTHO05D003910 3.1e-26 123.2 108 63.0
Nitab4.5_0002885g0030 Nicotiana tabacum HOM05D003423 ORTHO05D003910 3.1e-26 123.2 91 63.7
arahy.Tifrunner.gnm1.ann1.FCEI8S Arachis hypogaea HOM05D003423 ORTHO05D003910 4.1e-26 122.9 104 60.6
Lj9A540T81 Lonicera japonica HOM05D003423 ORTHO05D003910 4.1e-26 122.9 113 54.9
Rhsim08G0246600 Rhododendron simsii HOM05D003423 ORTHO05D003910 4.1e-26 122.9 91 62.6
AL1G64060 Arabidopsis lyrata HOM05D003423 ORTHO05D003910 5.4e-26 122.5 124 54.8
arahy.Tifrunner.gnm1.ann1.HUB5JH Arachis hypogaea HOM05D003423 ORTHO05D003910 5.4e-26 122.5 104 61.5
COL.COLO4_09809 Corchorus olitorius HOM05D003423 ORTHO05D003910 5.4e-26 122.5 96 65.6
FAN02G3068 Fragaria x ananassa HOM05D003423 ORTHO05D003910 5.4e-26 122.5 91 64.8
Medtr3g058580 Medicago truncatula HOM05D003423 ORTHO05D003910 5.4e-26 122.5 104 60.6
TPR.G30741 Trifolium pratense HOM05D003423 ORTHO05D003910 5.4e-26 122.5 104 59.6
TAR626G1285 Trochodendron aralioides HOM05D003423 ORTHO05D003910 5.4e-26 122.5 114 58.8
Actinidia37163 Actinidia chinensis HOM05D003423 ORTHO05D003910 7.0e-26 122.1 129 52.7
Aqoxy2G00648 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 7.0e-26 122.1 105 58.1
ECA236G2484 Erigeron canadensis HOM05D003423 ORTHO05D003910 7.0e-26 122.1 104 58.7
Hma1.2p1_0090F.1_g045620 Hydrangea macrophylla HOM05D003423 ORTHO05D003910 7.0e-26 122.1 113 56.6
SalBow6G3752 Salvia bowleyana HOM05D003423 ORTHO05D003910 7.0e-26 122.1 104 58.7
vmacro09657 Vaccinium macrocarpon HOM05D003423 ORTHO05D003910 7.0e-26 122.1 104 60.6
CAN.G790.42 Capsicum annuum HOM05D003423 ORTHO05D003910 9.1e-26 121.7 91 62.6
HanXRQChr11g0333391 Helianthus annuus HOM05D003423 ORTHO05D003910 9.1e-26 121.7 117 55.6
Cc04_g00490 Coffea canephora HOM05D003423 ORTHO05D003910 1.2e-25 121.3 106 56.6
Sc16g0007990 Simmondsia chinensis HOM05D003423 ORTHO05D003910 1.2e-25 121.3 120 55.0
Cpa.g.sc12.172 Carica papaya HOM05D003423 ORTHO05D003910 2.0e-25 120.6 130 51.5
Ciclev10027497m.g Citrus clementina HOM05D003423 ORTHO05D003910 2.0e-25 120.6 104 56.7
Eucgr.F02068 Eucalyptus grandis HOM05D003423 ORTHO05D003910 2.0e-25 120.6 124 51.6
Nitab4.5_0000163g0280 Nicotiana tabacum HOM05D003423 ORTHO05D003910 2.0e-25 120.6 135 50.4
RcHm_v2.0_Chr2g0150321 Rosa chinensis HOM05D003423 ORTHO05D003910 2.0e-25 120.6 91 63.7
Actinidia21857 Actinidia chinensis HOM05D003423 ORTHO05D003910 2.7e-25 120.2 95 61.1
C03p92860 Brassica napus HOM05D003423 ORTHO05D003910 2.7e-25 120.2 114 55.3
BolC3t21592H Brassica oleracea HOM05D003423 ORTHO05D003910 2.7e-25 120.2 114 55.3
Potri.011G092900 Populus trichocarpa HOM05D003423 ORTHO05D003910 2.7e-25 120.2 119 53.8
BolC3t21631H Brassica oleracea HOM05D003423 ORTHO05D003910 3.5e-25 119.8 114 55.3
PGSC0003DMG400029797 Solanum tuberosum HOM05D003423 ORTHO05D003910 3.5e-25 119.8 119 54.6
Actinidia33816 Actinidia chinensis HOM05D003423 ORTHO05D003910 4.5e-25 119.4 110 56.4
CARHR045630 Cardamine hirsuta HOM05D003423 ORTHO05D003910 4.5e-25 119.4 124 52.4
Lj3g0006153 Lotus japonicus HOM05D003423 ORTHO05D003910 4.5e-25 119.4 124 51.6
MD09G1157700 Malus domestica HOM05D003423 ORTHO05D003910 4.5e-25 119.4 91 63.7
VMungo0540G0232 Vigna mungo HOM05D003423 ORTHO05D003910 4.5e-25 119.4 113 54.9
AT1G55915 Arabidopsis thaliana HOM05D003423 ORTHO05D003910 5.9e-25 119.0 124 53.2
MSTRG.22510 Avicennia marina HOM05D003423 ORTHO05D003910 5.9e-25 119.0 91 62.6
Potri.008G009700 Populus trichocarpa HOM05D003423 ORTHO05D003910 5.9e-25 119.0 91 62.6
CSS0034763 Camellia sinensis var. sinensis HOM05D003423 ORTHO05D003910 7.7e-25 118.6 104 57.7
CSS0038448 Camellia sinensis var. sinensis HOM05D003423 ORTHO05D003910 7.7e-25 118.6 104 57.7
Oeu041432.1 Olea europaea HOM05D003423 ORTHO05D003910 7.7e-25 118.6 121 51.2
Sabra08G0005700 Salix brachista HOM05D003423 ORTHO05D003910 7.7e-25 118.6 91 62.6
BraA08t32074Z Brassica rapa HOM05D003423 ORTHO05D003910 1.0e-24 118.2 114 54.4
C03p93330 Brassica napus HOM05D003423 ORTHO05D003910 1.3e-24 117.9 119 53.8
Nitab4.5_0002517g0010 Nicotiana tabacum HOM05D003423 ORTHO05D003910 1.3e-24 117.9 119 53.8
Hund05673 Selenicereus undatus HOM05D003423 ORTHO05D003910 1.3e-24 117.9 121 50.4
BraA08t32113Z Brassica rapa HOM05D003423 ORTHO05D003910 1.7e-24 117.5 114 53.5
Lsat_1_v5_gn_1_26441 Lactuca sativa HOM05D003423 ORTHO05D003910 1.7e-24 117.5 104 59.6
THA.LOC104810286 Tarenaya hassleriana HOM05D003423 ORTHO05D003910 1.7e-24 117.5 127 51.2
DCAR_017083 Daucus carota HOM05D003423 ORTHO05D003910 2.3e-24 117.1 124 51.6
QL05p083582 Quercus lobata HOM05D003423 ORTHO05D003910 2.3e-24 117.1 91 61.5
QL05p083734 Quercus lobata HOM05D003423 ORTHO05D003910 2.3e-24 117.1 91 61.5
A08p00550 Brassica napus HOM05D003423 ORTHO05D003910 5.0e-24 115.9 114 54.4
Nn3g19300 Nelumbo nucifera HOM05D003423 ORTHO05D003910 6.6e-24 115.5 91 60.4
Oeu051387.2 Olea europaea HOM05D003423 ORTHO05D003910 6.6e-24 115.5 105 55.2
BcaC06g31883 Brassica carinata HOM05D003423 ORTHO05D003910 8.6e-24 115.2 101 60.4
Os06g0191200 Oryza sativa ssp. japonica HOM05D003423 ORTHO05D003910 1.1e-23 114.8 122 49.2
Peaxi162Scf00955g00007 Petunia axillaris HOM05D003423 ORTHO05D003910 1.1e-23 114.8 119 52.1
PGR102G0515 Punica granatum HOM05D003423 ORTHO05D003910 1.1e-23 114.8 91 60.4
Zm00001eb374280 Zea mays HOM05D003423 ORTHO05D003910 1.1e-23 114.8 123 48.8
SGA_v2.0_scaffold122G33294 Striga asiatica HOM05D003423 ORTHO05D003910 1.5e-23 114.4 120 49.2
HPP92_018337 Vanilla planifolia HOM05D003423 ORTHO05D003910 1.5e-23 114.4 108 54.6
Ca_12436_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 1.9e-23 114.0 104 55.8
Lsat_1_v5_gn_4_89280 Lactuca sativa HOM05D003423 ORTHO05D003910 1.9e-23 114.0 93 59.1
MSTRG.14479 Avicennia marina HOM05D003423 ORTHO05D003910 5.5e-23 112.5 119 52.1
HanXRQChr09g0277351 Helianthus annuus HOM05D003423 ORTHO05D003910 2.8e-22 110.2 92 57.6
SHI26527 Sapria himalayana HOM05D003423 ORTHO05D003910 3.6e-22 109.8 123 50.4
SMO361G0751 Selaginella moellendorffii HOM05D003423 ORTHO05D003910 3.6e-22 109.8 91 57.1
Pp3c5_3280 Physcomitrium patens HOM05D003423 ORTHO05D003910 8.0e-22 108.6 92 57.6
VMungo1080G0425 Vigna mungo HOM05D003423 ORTHO05D003910 1.0e-21 108.2 91 59.3
Gohir.A06G044200 Gossypium hirsutum HOM05D003423 ORTHO05D003910 1.4e-21 107.8 85 64.7
EL10Ac7g18155 Beta vulgaris HOM05D003423 ORTHO05D003910 3.0e-21 106.7 91 56.0
BcaC01g01534 Brassica carinata HOM05D003423 ORTHO05D003910 3.0e-21 106.7 114 51.8
Sed0010386 Sechium edule HOM05D003423 ORTHO05D003910 4.0e-21 106.3 91 59.3
unitig_27.g25148 Utricularia gibba HOM05D003423 ORTHO05D003910 5.2e-21 105.9 91 56.0
AagrBONN_evm.TU.Sc2ySwM_228.5488 Anthoceros agrestis HOM05D003423 ORTHO05D003910 6.8e-21 105.5 91 57.1
SEGI_22543 Sequoiadendron giganteum HOM05D003423 ORTHO05D003910 6.8e-21 105.5 87 59.8
SGA_v2.0_scaffold42G16002 Striga asiatica HOM05D003423 ORTHO05D003910 8.9e-21 105.1 123 46.3
Ciclev10010194m.g Citrus clementina HOM05D003423 ORTHO05D003910 2.0e-20 104.0 105 55.2
Mapoly0109s0050 Marchantia polymorpha HOM05D003423 ORTHO05D003910 4.4e-20 102.8 103 50.5
HPP92_017868 Vanilla planifolia HOM05D003423 ORTHO05D003910 7.5e-20 102.1 91 54.9
DCAR_007666 Daucus carota HOM05D003423 ORTHO05D003910 8.3e-19 98.6 78 59.0
AUR62025667 Chenopodium quinoa HOM05D003423 ORTHO05D003910 3.2e-18 96.7 91 49.5
Aqoxy102s004 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 7.8e-17 92.0 110 47.3
AUR62001338 Chenopodium quinoa HOM05D003423 ORTHO05D003910 2.3e-16 90.5 91 47.3
CDE04G0040 Ceratophyllum demersum HOM05D003423 ORTHO05D003910 3.9e-16 89.7 84 52.4
CBR_g12763 Chara braunii HOM05D003423 ORTHO05D003910 3.9e-16 89.7 92 48.9
Cc05_g14820 Coffea canephora HOM05D003423 ORTHO05D003910 2.1e-14 84.0 104 47.1
Migut.H01764 Erythranthe guttata HOM05D003423 ORTHO05D003910 6.1e-14 82.4 124 38.7
Solyc12g015660.2 Solanum lycopersicum HOM05D003423 ORTHO05D003910 8.0e-14 82.0 128 39.1
Sopen12g007570 Solanum pennellii HOM05D003423 ORTHO05D003910 1.0e-13 81.6 128 39.1
AUR62036405 Chenopodium quinoa HOM05D000929 ORTHO05D004813 1.2e-12 78.2 110 43.6
ClCG04G000610 Citrullus lanatus HOM05D003423 ORTHO05D003910 2.0e-12 77.4 91 46.2
Potri.010G249400 Populus trichocarpa HOM05D003423 ORTHO05D003910 7.5e-12 75.5 91 47.3
MELO3C009034.2 Cucumis melo HOM05D003423 ORTHO05D003910 1.3e-11 74.7 63 61.9
Sabra10G0194100 Salix brachista HOM05D003423 ORTHO05D003910 3.7e-11 73.2 56 60.7
AUR62031605 Chenopodium quinoa HOM05D000759 ORTHO05D000574 1.2e-09 68.2 106 41.5
Lj6g0002743 Lotus japonicus HOM05D003423 ORTHO05D003910 4.6e-09 66.2 121 40.5
Thhalv10011589m.g Eutrema salsugineum HOM05D003423 ORTHO05D003910 1.9e-07 60.8 57 54.4
ECA240G2479 Erigeron canadensis HOM05D000005 ORTHO05D000012 9.5e-07 58.5 62 50.0


User provided reference genes

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