Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037424 Chenopodium quinoa HOM05D009341 ORTHO05D011542 0.0e+00 1258.4 652 100.0
AUR62002825 Chenopodium quinoa HOM05D009341 ORTHO05D011542 0.0e+00 1097.0 691 83.5
AUR62004981 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.7e-307 1058.1 668 82.8
AUR62023668 Chenopodium quinoa HOM05D009341 ORTHO05D011542 3.0e-298 1028.1 695 78.6
AUR62030514 Chenopodium quinoa HOM05D009341 ORTHO05D011542 4.6e-275 951.0 748 70.3
AUR62002844 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.9e-200 702.6 472 79.4
AUR62041055 Chenopodium quinoa HOM05D009341 ORTHO05D011542 6.6e-173 611.7 704 51.1
AUR62034866 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.9e-168 596.3 656 54.4
AUR62037067 Chenopodium quinoa HOM05D009341 ORTHO05D011542 5.6e-164 582.0 505 66.1
AUR62041227 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.1e-142 510.4 276 93.5
AUR62033804 Chenopodium quinoa HOM05D009341 ORTHO05D011542 9.1e-106 388.7 292 73.3
AUR62039017 Chenopodium quinoa HOM05D009341 ORTHO05D011542 2.0e-105 387.5 521 43.4
Ah.09g223870 Amaranthus hybridus HOM05D009341 ORTHO05D011542 1.0e-101 375.2 604 39.1
AUR62026598 Chenopodium quinoa HOM05D009341 ORTHO05D011542 6.8e-101 372.5 470 44.5
AUR62024544 Chenopodium quinoa HOM05D009341 ORTHO05D011542 3.0e-93 347.1 472 43.2
AUR62015703 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.3e-91 341.7 597 39.7
AUR62015705 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.3e-91 341.7 597 39.7
EL10Ac4g07898 Beta vulgaris HOM05D009341 ORTHO05D011542 1.1e-90 338.6 703 33.0
AUR62013595 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.1e-79 302.0 464 41.2
AUR62020500 Chenopodium quinoa HOM05D009341 ORTHO05D011542 5.6e-79 299.7 594 34.7
AUR62042729 Chenopodium quinoa HOM05D009341 ORTHO05D011542 6.8e-69 266.2 462 36.4
Ah.14g080050 Amaranthus hybridus HOM05D009341 ORTHO05D011542 6.0e-65 253.1 584 32.9
Ah.14g085440 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.1e-63 248.8 580 32.2
Ah.05g174520 Amaranthus hybridus HOM05D009341 ORTHO05D011542 6.4e-59 233.0 356 41.6
EL10Ac9g22873 Beta vulgaris HOM05D007938 ORTHO05D009929 1.3e-43 182.2 691 28.2
Ah.13g065690 Amaranthus hybridus HOM05D009341 ORTHO05D011542 1.2e-41 175.6 308 38.0
EL10As1g23082 Beta vulgaris HOM05D007938 ORTHO05D009929 2.1e-41 174.9 662 26.4
EL10Ac1g01810 Beta vulgaris HOM05D007938 ORTHO05D009069 4.3e-39 167.2 619 27.5
Ah.13g067260 Amaranthus hybridus HOM05D009341 ORTHO05D011542 2.6e-36 157.9 581 26.9
EL10Ac9g22872 Beta vulgaris HOM05D007938 ORTHO05D009929 9.9e-36 156.0 719 25.6
EL10Ac2g03185 Beta vulgaris HOM05D007938 ORTHO05D009929 1.3e-35 155.6 668 25.6
EL10Ac3g06645 Beta vulgaris HOM05D007938 ORTHO05D009929 8.7e-32 142.9 664 24.8
EL10Ac4g08828 Beta vulgaris HOM05D007938 ORTHO05D009929 3.0e-24 117.9 314 30.6
EL10Ac9g22333 Beta vulgaris HOM05D007938 ORTHO05D009929 6.3e-22 110.2 586 23.9
EL10Ac5g12111 Beta vulgaris HOM05D007938 ORTHO05D009929 1.1e-21 109.4 308 30.2
EL10As1g23097 Beta vulgaris HOM05D007938 ORTHO05D009929 4.2e-18 97.4 243 32.9
EL10Ac4g09062 Beta vulgaris HOM05D007938 ORTHO05D009929 5.5e-18 97.1 417 28.1
EL10Ac8g19867 Beta vulgaris HOM05D007938 ORTHO05D009929 5.1e-16 90.5 410 24.9
Ah.03g144690 Amaranthus hybridus HOM05D017142 ORTHO05D018258 4.3e-15 87.4 248 31.0
AUR62013890 Chenopodium quinoa HOM05D009341 ORTHO05D011542 1.6e-14 85.5 85 54.1
EL10Ac6g14520 Beta vulgaris HOM05D007938 ORTHO05D009929 4.8e-14 84.0 237 27.4
Ah.15g097810 Amaranthus hybridus HOM05D009341 ORTHO05D011542 6.3e-14 83.6 69 53.6
Zm00001eb133400 Zea mays HOM05D013194 ORTHO05D015061 1.4e-13 82.4 499 24.6
EL10Ac5g12069 Beta vulgaris HOM05D007938 ORTHO05D009929 1.8e-13 82.0 105 39.0
EL10Ac9g20787 Beta vulgaris HOM05D007938 ORTHO05D009929 1.8e-13 82.0 105 39.0
Zm00001eb216850 Zea mays HOM05D013194 ORTHO05D015061 1.8e-13 82.0 479 24.2
EL10Ac3g06423 Beta vulgaris HOM05D007938 ORTHO05D009929 3.1e-13 81.3 105 39.0
EL10Ac4g08827 Beta vulgaris HOM05D007938 ORTHO05D009929 5.3e-13 80.5 266 25.9
EL10As22g24230 Beta vulgaris HOM05D007938 ORTHO05D009929 6.9e-13 80.1 383 23.0
Lj2g0002143 Lotus japonicus HOM05D002644 ORTHO05D003267 7.7e-12 76.6 454 26.0
EL10Ac1g02046 Beta vulgaris HOM05D007938 ORTHO05D009929 2.9e-11 74.7 469 25.2
EL10Ac9g20935 Beta vulgaris HOM05D007938 ORTHO05D009929 2.9e-11 74.7 213 28.2
EL10As14g24069 Beta vulgaris HOM05D007938 ORTHO05D009929 2.9e-11 74.7 388 22.7
Ah.15g097980 Amaranthus hybridus HOM05D007938 ORTHO05D009929 3.8e-11 74.3 243 28.0
EL10As4g23435 Beta vulgaris HOM05D007938 ORTHO05D009929 1.1e-10 72.8 283 27.9
Os05g0359000 Oryza sativa ssp. japonica HOM05D013194 ORTHO05D015061 1.1e-10 72.8 442 21.3
EL10Ac8g19250 Beta vulgaris HOM05D007938 ORTHO05D009929 1.9e-10 72.0 376 25.0
EL10Ac9g20951 Beta vulgaris HOM05D007938 ORTHO05D009929 5.5e-10 70.5 171 29.8
Zm00001eb093240 Zea mays HOM05D013194 ORTHO05D015061 5.5e-10 70.5 480 22.5
AUR62038876 Chenopodium quinoa HOM05D009341 ORTHO05D137676 9.4e-10 69.7 36 94.4
EL10Ac1g01968 Beta vulgaris HOM05D007938 ORTHO05D009929 2.7e-09 68.2 146 30.1
EL10Ac8g19938 Beta vulgaris HOM05D007938 ORTHO05D009929 1.4e-08 65.9 221 29.0
EL10Ac1g01545 Beta vulgaris HOM05D007938 ORTHO05D009929 3.9e-08 64.3 291 27.8
EL10Ac2g03155 Beta vulgaris HOM05D007938 ORTHO05D009929 6.7e-08 63.5 184 33.7
EL10As4g23377 Beta vulgaris HOM05D007938 ORTHO05D009929 1.5e-07 62.4 186 31.7
ECA236G1401 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-07 62.4 461 21.0
EL10Ac3g06318 Beta vulgaris HOM05D007938 ORTHO05D009929 2.6e-07 61.6 203 26.6
Zm00001eb020190 Zea mays HOM05D013194 ORTHO05D015061 3.3e-07 61.2 356 25.8
EL10Ac6g14126 Beta vulgaris HOM05D007938 ORTHO05D009929 1.3e-06 59.3 163 25.8
PSO724G0047 Papaver somniferum HOM05D010375 ORTHO05D000233 1.7e-06 58.9 323 26.0
ECA248G3320 Erigeron canadensis HOM05D035679 ORTHO05D011396 2.2e-06 58.5 162 26.5
TPR.G7531 Trifolium pratense HOM05D009291 ORTHO05D010716 2.2e-06 58.5 238 27.7
TPR.G25298 Trifolium pratense HOM05D000107 ORTHO05D000062 3.7e-06 57.8 291 25.8
HanXRQChr09g0253291 Helianthus annuus HOM05D008452 ORTHO05D000233 4.8e-06 57.4 283 23.3
Lsat_1_v5_gn_0_40461 Lactuca sativa HOM05D009001 ORTHO05D011396 8.2e-06 56.6 442 21.5


User provided reference genes

Program Settings