Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 8.6e-102 373.6 184 100.0
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.3e-54 216.9 112 95.5
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 6.9e-51 204.5 181 64.1
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 8.1e-44 181.0 162 61.7
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 2.4e-43 179.5 114 77.2
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 5.8e-42 174.9 118 72.0
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.3e-41 173.7 122 70.5
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 8.4e-41 171.0 111 73.9
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.4e-40 170.2 118 71.2
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 2.5e-40 169.5 121 69.4
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 4.2e-40 168.7 125 67.2
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 4.2e-40 168.7 123 71.5
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 7.1e-40 167.9 116 71.6
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 9.3e-40 167.5 109 76.1
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 1.2e-39 167.2 111 74.8
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 1.6e-39 166.8 120 63.3
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.0e-38 164.1 139 61.2
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 1.3e-38 163.7 119 68.1
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 3.0e-38 162.5 159 54.7
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 3.9e-38 162.2 116 71.6
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 3.9e-38 162.2 134 60.4
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 3.9e-38 162.2 125 61.6
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 3.9e-38 162.2 146 55.5
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 5.1e-38 161.8 123 66.7
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 5.1e-38 161.8 113 69.0
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 6.7e-38 161.4 112 68.8
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 1.1e-37 160.6 109 69.7
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 1.9e-37 159.8 111 70.3
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 1.9e-37 159.8 96 79.2
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 2.5e-37 159.5 165 51.5
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.3e-37 159.1 139 60.4
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 4.3e-37 158.7 108 72.2
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 4.3e-37 158.7 138 60.1
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 4.3e-37 158.7 170 55.9
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 5.7e-37 158.3 139 59.7
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 5.7e-37 158.3 165 50.9
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 5.7e-37 158.3 146 57.5
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 7.4e-37 157.9 120 64.2
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 7.4e-37 157.9 98 75.5
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.3e-36 157.1 111 70.3
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 3.7e-36 155.6 116 67.2
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 4.8e-36 155.2 122 63.9
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 4.8e-36 155.2 139 57.6
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 8.2e-36 154.5 115 64.3
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 8.2e-36 154.5 154 54.5
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 1.4e-35 153.7 93 75.3
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 1.8e-35 153.3 147 57.1
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.8e-35 153.3 114 66.7
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 2.4e-35 152.9 132 62.1
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 2.4e-35 152.9 121 64.5
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 5.3e-35 151.8 113 65.5
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 6.9e-35 151.4 113 65.5
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 6.9e-35 151.4 113 65.5
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 6.9e-35 151.4 122 62.3
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 9.0e-35 151.0 125 62.4
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 1.5e-34 150.2 113 65.5
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 1.5e-34 150.2 113 65.5
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 1.5e-34 150.2 119 63.9
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 2.0e-34 149.8 112 65.2
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 3.4e-34 149.1 120 60.8
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 5.8e-34 148.3 118 60.2
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 5.8e-34 148.3 108 63.0
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 7.6e-34 147.9 115 63.5
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 1.0e-33 147.5 150 52.0
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 2.2e-33 146.4 119 63.9
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 2.9e-33 146.0 102 68.6
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 8.4e-33 144.4 132 56.8
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.1e-32 144.1 136 57.4
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 7.2e-32 141.4 115 59.1
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 9.3e-32 141.0 85 78.8
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 1.6e-31 140.2 114 58.8
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 2.7e-31 139.4 121 54.5
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 3.5e-31 139.0 121 56.2
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 6.1e-31 138.3 119 61.3
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 2.3e-30 136.3 112 64.3
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 1.3e-28 130.6 87 73.6
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 1.8e-27 126.7 93 67.7
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 2.4e-27 126.3 85 68.2
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.5e-26 123.6 85 65.9
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 1.7e-25 120.2 75 77.3
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 3.8e-25 119.0 93 61.3
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 8.5e-25 117.9 86 62.8
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 7.4e-21 104.8 91 62.6
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 4.8e-20 102.1 87 52.9
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 3.1e-19 99.4 70 64.3
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 1.7e-17 93.6 87 52.9
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 1.4e-14 84.0 118 41.5
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 2.0e-13 80.1 65 61.5
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.8e-11 73.6 87 51.7
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.8e-11 73.6 87 51.7
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 4.1e-11 72.4 58 67.2
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 7.0e-11 71.6 59 64.4
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 2.9e-09 66.2 89 41.6
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 1.9e-08 63.5 59 61.0
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 2.5e-08 63.2 86 43.0
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.2e-07 60.8 46 67.4


User provided reference genes

Program Settings