Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 2.5e-124 448.7 222 100.0
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.8e-117 426.0 221 95.0
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 5.9e-89 331.3 200 82.5
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 9.4e-87 323.9 200 81.0
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 1.1e-74 283.9 200 69.0
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 6.8e-69 264.6 200 65.5
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 1.8e-66 256.5 193 65.3
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 1.2e-65 253.8 194 64.9
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 2.7e-65 252.7 194 64.9
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 7.7e-65 251.1 190 63.2
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 7.7e-65 251.1 200 63.5
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 1.0e-64 250.8 200 58.5
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 1.0e-64 250.8 190 61.6
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 1.0e-64 250.8 190 63.2
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 1.3e-64 250.4 209 61.2
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 1.7e-64 250.0 201 61.2
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 1.7e-64 250.0 194 64.4
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 1.7e-64 250.0 190 63.2
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.7e-64 250.0 200 62.5
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 2.2e-64 249.6 200 62.5
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 3.8e-64 248.8 200 62.5
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 3.8e-64 248.8 192 64.1
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 1.1e-63 247.3 194 61.9
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.5e-63 246.9 199 61.8
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 1.9e-63 246.5 200 60.5
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 3.2e-63 245.7 199 61.8
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 3.2e-63 245.7 198 63.1
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 4.2e-63 245.4 194 63.4
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 7.2e-63 244.6 200 62.5
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 7.2e-63 244.6 197 61.4
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 7.2e-63 244.6 192 61.5
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 9.5e-63 244.2 195 61.0
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 1.2e-62 243.8 192 62.0
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 1.6e-62 243.4 190 63.2
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 2.1e-62 243.0 200 60.5
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.1e-62 243.0 200 62.5
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 2.1e-62 243.0 202 61.4
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 3.6e-62 242.3 203 61.6
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 8.0e-62 241.1 201 60.2
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.0e-61 240.7 197 62.9
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.4e-61 240.4 197 63.5
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 1.8e-61 240.0 192 59.4
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.3e-61 239.6 197 63.5
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 3.0e-61 239.2 200 61.5
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 4.0e-61 238.8 191 60.2
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 6.8e-61 238.0 191 59.7
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 6.8e-61 238.0 193 60.6
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 8.8e-61 237.7 200 60.5
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 8.8e-61 237.7 193 60.6
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 1.5e-60 236.9 195 61.0
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 1.5e-60 236.9 196 60.2
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 2.6e-60 236.1 201 59.2
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 5.7e-60 235.0 200 60.0
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 7.5e-60 234.6 194 59.8
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 9.8e-60 234.2 194 60.3
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 9.8e-60 234.2 194 58.8
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 1.3e-59 233.8 159 67.9
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 1.3e-59 233.8 198 59.1
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.7e-59 233.4 194 58.2
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.7e-59 233.4 193 60.1
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.8e-59 232.6 193 63.2
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 1.1e-58 230.7 196 60.2
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 1.1e-58 230.7 191 59.2
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 1.4e-58 230.3 196 60.2
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 1.8e-58 229.9 198 58.6
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 1.8e-58 229.9 186 61.3
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 2.4e-58 229.6 195 59.0
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 4.1e-58 228.8 191 59.2
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 4.1e-58 228.8 186 60.8
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 4.1e-58 228.8 202 57.9
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 5.4e-58 228.4 196 59.7
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 7.0e-58 228.0 193 59.1
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 9.2e-58 227.6 193 59.1
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 1.2e-57 227.3 196 57.7
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 4.5e-57 225.3 186 63.4
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 1.7e-56 223.4 191 60.2
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 1.7e-56 223.4 198 55.1
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 2.3e-56 223.0 191 61.3
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 3.8e-56 222.2 199 53.8
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 1.1e-55 220.7 186 58.1
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 1.5e-55 220.3 199 53.3
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 1.5e-55 220.3 193 58.0
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 1.9e-55 219.9 191 61.8
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 2.5e-55 219.5 201 53.7
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 3.3e-55 219.2 204 55.4
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 3.3e-55 219.2 195 56.4
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 5.6e-55 218.4 198 54.5
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 7.3e-55 218.0 192 56.2
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 7.3e-55 218.0 198 57.6
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 1.2e-54 217.2 194 56.2
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 1.2e-54 217.2 205 54.6
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 1.2e-54 217.2 205 54.6
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 1.2e-54 217.2 199 56.8
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 2.1e-54 216.5 205 54.6
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 2.1e-54 216.5 185 59.5
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 3.6e-54 215.7 145 69.0
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 4.7e-54 215.3 188 55.9
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 1.0e-53 214.2 195 55.4
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 5.2e-53 211.8 196 56.1
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 8.9e-53 211.1 157 66.9
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 8.9e-53 211.1 196 56.1
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 9.8e-52 207.6 193 52.3
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 4.9e-51 205.3 193 52.3
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 3.5e-49 199.1 197 53.8
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 5.9e-49 198.4 194 53.6
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 2.3e-48 196.4 191 53.9
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 3.9e-48 195.7 188 52.1
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 1.2e-46 190.7 183 53.6
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 4.4e-44 182.2 188 52.1
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 7.5e-44 181.4 158 56.3
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 8.3e-43 177.9 159 56.6
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 1.0e-40 171.0 97 79.4
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 9.5e-39 164.5 100 75.0
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.1e-37 161.0 98 74.5
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 5.2e-37 158.7 87 81.6
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 1.2e-33 147.5 166 47.6
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 3.5e-33 146.0 92 71.7
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 3.0e-32 142.9 73 90.4
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 1.5e-31 140.6 83 75.9
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 2.1e-30 136.7 92 68.5
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 6.8e-29 131.7 172 47.1
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 2.4e-26 123.2 79 70.9
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 2.7e-25 119.8 95 61.1
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 3.0e-24 116.3 95 55.8
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 3.9e-24 115.9 178 41.6
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 8.1e-22 108.2 97 57.7
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 1.2e-20 104.4 100 51.0
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 3.4e-20 102.8 67 67.2


User provided reference genes

Program Settings